RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 IGHV1-45A0A0A0MS14 117 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 K7ERJ3 54 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 CACNG7P62955 275 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 TMEM164Q5U3C3 297 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 MRPL14Q6P1L8 145 aaKnown RBP10.42□□□□□ -0.74
PRPF4-201ENST00000374198 ITLN1Q8WWA0 313 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 ARPC1AQ92747 370 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 FXYD5Q96DB9 178 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
PRPF4-201ENST00000374198 IMMP1LQ96LU5 166 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 SLC25A5P05141 298 aaKnown RBP10.41□□□□□ -0.74
PRPF4-201ENST00000374198 DDB2Q92466 427 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 FAM106CPP0CH98 169 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 CT45A6P0DMU7 189 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 CT45A5P0DMU8 189 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 CT45A7P0DMV0 189 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 FAM106AQ4KMX7 169 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 CT45A1Q5HYN5 189 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 FAM90A1Q86YD7 464 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 TUSC5Q8IXB3 177 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 CT45A3Q8NHU0 189 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 ZNF714Q96N38 554 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 METRNQ9UJH8 293 aa10.41□□□□□ -0.74
PRPF4-201ENST00000374198 E9PLD3 99 aa10.4□□□□□ -0.74
PRPF4-201ENST00000374198 COX7A2P2O60397 106 aa10.4□□□□□ -0.74
PRPF4-201ENST00000374198 ZNF826PQ6ZT77 177 aa10.4□□□□□ -0.74
PRPF4-201ENST00000374198 PRR7Q8TB68 274 aa10.4□□□□□ -0.74
PRPF4-201ENST00000374198 FREM1Q5H8C1 2179 aa10.4□□□□□ -0.74
PRPF4-201ENST00000374198 C10orf113Q5VZT2 155 aa10.4□□□□□ -0.74
PRPF4-201ENST00000374198 OR5AN1Q8NGI8 311 aa10.4□□□□□ -0.74
PRPF4-201ENST00000374198 ZNF418Q8TF45 676 aaPredicted RBP10.4□□□□□ -0.74
PRPF4-201ENST00000374198 KNTC1P50748 2209 aa10.4□□□□□ -0.75
PRPF4-201ENST00000374198 TPRP12270 2363 aaKnown RBP10.4□□□□□ -0.75
PRPF4-201ENST00000374198 LTAP01374 205 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 IGHV3-13P01766 116 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 KIR2DL2P43627 348 aaPredicted RBP10.39□□□□□ -0.75
PRPF4-201ENST00000374198 ZNF134P52741 427 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 LOXL1Q08397 574 aaPredicted RBP10.39□□□□□ -0.75
PRPF4-201ENST00000374198 ALKBH6Q3KRA9 238 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 C2orf83Q53S99 150 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 CXorf67Q86X51 503 aaPredicted RBP10.39□□□□□ -0.75
PRPF4-201ENST00000374198 IFI27L2Q9H2X8 130 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 HIGD1BQ9P298 99 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 TCRBV4S1A1TA0A5B7 111 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 PGPA6NDG6 321 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 OR11H12B2RN74 326 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 NPIPB6E9PJ23 425 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 H3BMG7 143 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 COX6A1P12074 109 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 IFI27P40305 119 aaPredicted RBP10.39□□□□□ -0.75
PRPF4-201ENST00000374198 INSL3P51460 131 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 PRCDQ00LT1 54 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 C1orf229Q6ZS94 237 aaPredicted RBP10.39□□□□□ -0.75
PRPF4-201ENST00000374198 PDPNQ86YL7 162 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 OR11H1Q8NG94 326 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 OR11H2Q8NH07 326 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 CEP295Q9C0D2 2601 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 JPT1Q9UK76 154 aa10.39□□□□□ -0.75
PRPF4-201ENST00000374198 CD69Q07108 199 aa10.38□□□□□ -0.75
PRPF4-201ENST00000374198 TMEM95Q3KNT9 176 aa10.38□□□□□ -0.75
PRPF4-201ENST00000374198 PATE2Q6UY27 113 aa10.38□□□□□ -0.75
PRPF4-201ENST00000374198 OR1L4Q8NGR5 311 aa10.38□□□□□ -0.75
PRPF4-201ENST00000374198 FMC1Q96HJ9 113 aa10.38□□□□□ -0.75
PRPF4-201ENST00000374198 ZNF414Q96IQ9 312 aa10.38□□□□□ -0.75
PRPF4-201ENST00000374198 PRNDQ9UKY0 176 aa10.38□□□□□ -0.75
PRPF4-201ENST00000374198 OVOL3O00110 214 aa10.38□□□□□ -0.75
PRPF4-201ENST00000374198 CT45A10P0DMU9 189 aa10.38□□□□□ -0.75
PRPF4-201ENST00000374198 TTC9CQ8N5M4 171 aa10.38□□□□□ -0.75
PRPF4-201ENST00000374198 NHP2Q9NX24 153 aaKnown RBP10.38□□□□□ -0.75
PRPF4-201ENST00000374198 CHD8Q9HCK8 2581 aa10.38□□□□□ -0.75
PRPF4-201ENST00000374198 A0A1B0GUT8 65 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 IGLL5B9A064 214 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 SLC25A17O43808 307 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 FSTL3O95633 263 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 ATP5IP56385 69 aaPredicted RBP10.37□□□□□ -0.75
PRPF4-201ENST00000374198 SRYQ05066 204 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 EDDM3AQ14507 147 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 C8orf86Q6ZUL3 223 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 C11orf53Q8IXP5 236 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 ZNF502Q8TBZ5 544 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 PGPEP1Q9NXJ5 209 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 ACACBO00763 2458 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 KLRC4-KLRK1H3BQV0 150 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 COL8A1P27658 744 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 GAGE13Q4V321 117 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 CHAC1Q9BUX1 264 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 RNASE2P10153 161 aaKnown RBP10.37□□□□□ -0.75
PRPF4-201ENST00000374198 SLC25A48Q6ZT89 311 aaKnown RBP10.37□□□□□ -0.75
PRPF4-201ENST00000374198 OR1L8Q8NGR8 309 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 C20orf78Q9BR46 151 aa10.37□□□□□ -0.75
PRPF4-201ENST00000374198 SPINK8P0C7L1 97 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 GATA3P23771 443 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 SSBP2P81877 361 aaPredicted RBP10.36□□□□□ -0.75
PRPF4-201ENST00000374198 MDP1Q86V88 176 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 GATD1Q8NB37 220 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 PRO0461Q9UI25 63 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 CYSLTR1Q9Y271 337 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 LINC00312Q9Y6C7 94 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 WDFY3Q8IZQ1 3526 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 ARMS2P0C7Q2 107 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms