RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 ANXA7P20073 488 aaKnown RBP15.72■□□□□ 0.11
CCDC28B-201ENST00000373602 ID1P41134 155 aa15.72■□□□□ 0.11
CCDC28B-201ENST00000373602 C1QTNF4Q9BXJ3 329 aa15.72■□□□□ 0.11
CCDC28B-201ENST00000373602 SLC45A2Q9UMX9 530 aa15.72■□□□□ 0.11
CCDC28B-201ENST00000373602 EPPK1P58107 5090 aaKnown RBP15.71■□□□□ 0.11
CCDC28B-201ENST00000373602 PSMB3P49720 205 aa15.71■□□□□ 0.11
CCDC28B-201ENST00000373602 C4orf46Q504U0 113 aa15.71■□□□□ 0.11
CCDC28B-201ENST00000373602 ACOT7LQ6ZUV0 252 aa15.71■□□□□ 0.11
CCDC28B-201ENST00000373602 OR8I2Q8N0Y5 310 aa15.71■□□□□ 0.11
CCDC28B-201ENST00000373602 AKR1C1Q04828 323 aa15.7■□□□□ 0.1
CCDC28B-201ENST00000373602 CNPY1Q3B7I2 92 aa15.7■□□□□ 0.1
CCDC28B-201ENST00000373602 GDF5OSQ5U4N7 250 aa15.7■□□□□ 0.1
CCDC28B-201ENST00000373602 TMEM182Q6ZP80 229 aaPredicted RBP15.7■□□□□ 0.1
CCDC28B-201ENST00000373602 BPIFCQ8NFQ6 507 aa15.7■□□□□ 0.1
CCDC28B-201ENST00000373602 SMIM8Q96KF7 97 aa15.7■□□□□ 0.1
CCDC28B-201ENST00000373602 LINC00052Q96N35 136 aa15.7■□□□□ 0.1
CCDC28B-201ENST00000373602 PSENENQ9NZ42 101 aa15.7■□□□□ 0.1
CCDC28B-201ENST00000373602 NDUFA13Q9P0J0 144 aa15.7■□□□□ 0.1
CCDC28B-201ENST00000373602 XCL2Q9UBD3 114 aa15.7■□□□□ 0.1
CCDC28B-201ENST00000373602 ELOA3CA0A087WX78 387 aaPredicted RBP15.69■□□□□ 0.1
CCDC28B-201ENST00000373602 PMS2P5A8MQ11 134 aa15.69■□□□□ 0.1
CCDC28B-201ENST00000373602 GATA2P23769 480 aaPredicted RBP15.69■□□□□ 0.1
CCDC28B-201ENST00000373602 DEFB1P60022 68 aa15.69■□□□□ 0.1
CCDC28B-201ENST00000373602 LGALS9CQ6DKI2 356 aa15.69■□□□□ 0.1
CCDC28B-201ENST00000373602 FOXI2Q6ZQN5 318 aa15.69■□□□□ 0.1
CCDC28B-201ENST00000373602 TMEM144Q7Z5S9 345 aa15.69■□□□□ 0.1
CCDC28B-201ENST00000373602 SAV1Q9H4B6 383 aaPredicted RBP15.69■□□□□ 0.1
CCDC28B-201ENST00000373602 ZNF98A6NK75 572 aa15.68■□□□□ 0.1
CCDC28B-201ENST00000373602 ISLRO14498 428 aa15.68■□□□□ 0.1
CCDC28B-201ENST00000373602 SSSCA1O60232 199 aa15.68■□□□□ 0.1
CCDC28B-201ENST00000373602 SAMD13Q5VXD3 122 aa15.68■□□□□ 0.1
CCDC28B-201ENST00000373602 C2CD4CQ8TF44 421 aa15.68■□□□□ 0.1
CCDC28B-201ENST00000373602 SLC25A32Q9H2D1 315 aa15.68■□□□□ 0.1
CCDC28B-201ENST00000373602 C11orf94C9JXX5 98 aa15.67■□□□□ 0.1
CCDC28B-201ENST00000373602 PLA2G10O15496 165 aa15.67■□□□□ 0.1
CCDC28B-201ENST00000373602 ORM2P19652 201 aa15.67■□□□□ 0.1
CCDC28B-201ENST00000373602 GALR1P47211 349 aa15.67■□□□□ 0.1
CCDC28B-201ENST00000373602 PAX9P55771 341 aa15.67■□□□□ 0.1
CCDC28B-201ENST00000373602 GSG1LQ6UXU4 331 aa15.67■□□□□ 0.1
CCDC28B-201ENST00000373602 MITD1Q8WV92 249 aa15.67■□□□□ 0.1
CCDC28B-201ENST00000373602 CLUHP3Q96NS8 147 aa15.67■□□□□ 0.1
CCDC28B-201ENST00000373602 HLA-DMBP28068 263 aa15.66■□□□□ 0.1
CCDC28B-201ENST00000373602 MEOX2P50222 304 aa15.66■□□□□ 0.1
CCDC28B-201ENST00000373602 TCTAP57738 103 aa15.66■□□□□ 0.1
CCDC28B-201ENST00000373602 IAH1Q2TAA2 248 aaPredicted RBP15.66■□□□□ 0.1
CCDC28B-201ENST00000373602 TMEM14EPQ6UXP3 125 aa15.66■□□□□ 0.1
CCDC28B-201ENST00000373602 C17orf77Q96MU5 243 aa15.66■□□□□ 0.1
CCDC28B-201ENST00000373602 TMEM147Q9BVK8 224 aa15.66■□□□□ 0.1
CCDC28B-201ENST00000373602 SLC25A22Q9H936 323 aa15.66■□□□□ 0.1
CCDC28B-201ENST00000373602 SMCO3A2RU48 225 aa15.65■□□□□ 0.1
CCDC28B-201ENST00000373602 S100A7P31151 101 aa15.65■□□□□ 0.1
CCDC28B-201ENST00000373602 SPATA31B1PQ5VZV4 182 aa15.65■□□□□ 0.1
CCDC28B-201ENST00000373602 CYP2G1PQ6ZSU1 146 aa15.65■□□□□ 0.1
CCDC28B-201ENST00000373602 ZBTB8BQ8NAP8 495 aaPredicted RBP15.65■□□□□ 0.1
CCDC28B-201ENST00000373602 OR1B1Q8NGR6 318 aa15.65■□□□□ 0.1
CCDC28B-201ENST00000373602 RSG1Q9BU20 258 aa15.65■□□□□ 0.1
CCDC28B-201ENST00000373602 C20orf85Q9H1P6 137 aa15.65■□□□□ 0.1
CCDC28B-201ENST00000373602 LYRM1O43325 122 aa15.64■□□□□ 0.09
CCDC28B-201ENST00000373602 CCNKO75909 580 aa15.64■□□□□ 0.09
CCDC28B-201ENST00000373602 IGKV3-20P01619 116 aa15.64■□□□□ 0.09
CCDC28B-201ENST00000373602 DLK1P80370 383 aa15.64■□□□□ 0.09
CCDC28B-201ENST00000373602 ZNF705AQ6ZN79 300 aaPredicted RBP15.64■□□□□ 0.09
CCDC28B-201ENST00000373602 C16orf92Q96LL3 132 aa15.64■□□□□ 0.09
CCDC28B-201ENST00000373602 GPR82Q96P67 336 aa15.64■□□□□ 0.09
CCDC28B-201ENST00000373602 NEU1Q99519 415 aa15.64■□□□□ 0.09
CCDC28B-201ENST00000373602 SCGB1D2O95969 90 aa15.63■□□□□ 0.09
CCDC28B-201ENST00000373602 IL5P05113 134 aa15.63■□□□□ 0.09
CCDC28B-201ENST00000373602 METTL15P1P0C7V9 234 aa15.63■□□□□ 0.09
CCDC28B-201ENST00000373602 TAS2R30P59541 319 aa15.63■□□□□ 0.09
CCDC28B-201ENST00000373602 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.63■□□□□ 0.09
CCDC28B-201ENST00000373602 Q6ZTC4 211 aa15.63■□□□□ 0.09
CCDC28B-201ENST00000373602 ZNF709Q8N972 641 aa15.63■□□□□ 0.09
CCDC28B-201ENST00000373602 OR4B1Q8NGF8 309 aa15.63■□□□□ 0.09
CCDC28B-201ENST00000373602 C20orf173Q96LM9 149 aa15.63■□□□□ 0.09
CCDC28B-201ENST00000373602 GSKIPQ9P0R6 139 aa15.63■□□□□ 0.09
CCDC28B-201ENST00000373602 RCL1Q9Y2P8 373 aaKnown RBP15.63■□□□□ 0.09
CCDC28B-201ENST00000373602 ZNF705FA8MVS1 300 aaPredicted RBP15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 IGLL5B9A064 214 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 FNDC10F2Z333 226 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 F6UB75 175 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 H3BRN7 92 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 TSC22D2O75157 780 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 ZNF705DP0CH99 300 aaPredicted RBP15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 ZNF705BP0CI00 300 aaPredicted RBP15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 FXYD7P58549 80 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 PLP1P60201 277 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 RRAS2P62070 204 aaPredicted RBP15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 EBLN2Q6P2I7 272 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 RPP25LQ8N5L8 163 aaKnown RBP15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 SLC25A39Q9BZJ4 359 aaPredicted RBP15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 RPRMQ9NS64 109 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 DOK5Q9P104 306 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 APLNQ9ULZ1 77 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 CELA1Q9UNI1 258 aa15.62■□□□□ 0.09
CCDC28B-201ENST00000373602 BIRC6Q9NR09 4857 aa15.61■□□□□ 0.09
CCDC28B-201ENST00000373602 TRAV10A0A0B4J240 114 aa15.61■□□□□ 0.09
CCDC28B-201ENST00000373602 A0A0J9YX75 114 aa15.61■□□□□ 0.09
CCDC28B-201ENST00000373602 TCRBP04435 133 aa15.61■□□□□ 0.09
CCDC28B-201ENST00000373602 SELENOTP62341 195 aa15.61■□□□□ 0.09
CCDC28B-201ENST00000373602 PSG9Q00887 426 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms