RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 KALRNO60229 2985 aa11.03□□□□□ -0.64
USP49-201ENST00000373006 DIAPH2-AS1Q14236 149 aa11.03□□□□□ -0.64
USP49-201ENST00000373006 IGKV1D-37A0A075B6S9 117 aa11.03□□□□□ -0.64
USP49-201ENST00000373006 TMEM177Q53S58 311 aa11.03□□□□□ -0.64
USP49-201ENST00000373006 OR1L4Q8NGR5 311 aa11.03□□□□□ -0.64
USP49-201ENST00000373006 RPP21Q9H633 154 aaKnown RBP11.03□□□□□ -0.64
USP49-201ENST00000373006 TCRBV4S1A1TA0A5B7 111 aa11.02□□□□□ -0.64
USP49-201ENST00000373006 CDX4O14627 284 aaPredicted RBP11.02□□□□□ -0.64
USP49-201ENST00000373006 PLP1P60201 277 aa11.02□□□□□ -0.64
USP49-201ENST00000373006 NHLH1Q02575 133 aa11.02□□□□□ -0.64
USP49-201ENST00000373006 Q71RC1 249 aaPredicted RBP11.02□□□□□ -0.64
USP49-201ENST00000373006 GPR82Q96P67 336 aa11.02□□□□□ -0.64
USP49-201ENST00000373006 ST20Q9HBF5 79 aa11.02□□□□□ -0.64
USP49-201ENST00000373006 RPUSD1Q9UJJ7 312 aaKnown RBP11.02□□□□□ -0.64
USP49-201ENST00000373006 TANC2Q9HCD6 1990 aa11.02□□□□□ -0.64
USP49-201ENST00000373006 DSCAML1Q8TD84 2053 aa11.02□□□□□ -0.64
USP49-201ENST00000373006 MUC6Q6W4X9 2439 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 FSTL3O95633 263 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 P01737 135 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 MTURNQ8N3F0 131 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 C1orf162Q8NEQ5 155 aaPredicted RBP11.02□□□□□ -0.65
USP49-201ENST00000373006 GAFA1Q96PS6 74 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 TRAV8-1A0A0A6YYK1 113 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 CRXO43186 299 aaPredicted RBP11.02□□□□□ -0.65
USP49-201ENST00000373006 HCP5Q6MZN7 132 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 ATP5L2Q7Z4Y8 100 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 C5orf17Q8NAS9 161 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 RAB9BQ9NP90 201 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 RNF7Q9UBF6 113 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 ZNF835Q9Y2P0 537 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 SLC25A15Q9Y619 301 aa11.02□□□□□ -0.65
USP49-201ENST00000373006 A6NJY4 79 aa11.01□□□□□ -0.65
USP49-201ENST00000373006 CGB1A6NKQ9 187 aa11.01□□□□□ -0.65
USP49-201ENST00000373006 CCL3L1P16619 93 aa11.01□□□□□ -0.65
USP49-201ENST00000373006 MEF2CQ06413 473 aaPredicted RBP11.01□□□□□ -0.65
USP49-201ENST00000373006 OR4A5Q8NH83 315 aa11.01□□□□□ -0.65
USP49-201ENST00000373006 FLYWCH2Q96CP2 140 aaKnown RBP11.01□□□□□ -0.65
USP49-201ENST00000373006 PERPQ96FX8 193 aa11.01□□□□□ -0.65
USP49-201ENST00000373006 ASCL2Q99929 193 aa11.01□□□□□ -0.65
USP49-201ENST00000373006 PLSCR4Q9NRQ2 329 aa11.01□□□□□ -0.65
USP49-201ENST00000373006 PROCRQ9UNN8 238 aa11.01□□□□□ -0.65
USP49-201ENST00000373006 A8MWL6 223 aa11.01□□□□□ -0.65
USP49-201ENST00000373006 NBEAP1P0C6P0 100 aa11.01□□□□□ -0.65
USP49-201ENST00000373006 MYCNOSP40205 109 aa11.01□□□□□ -0.65
USP49-201ENST00000373006 DAZAP1Q96EP5 407 aaKnown RBP11.01□□□□□ -0.65
USP49-201ENST00000373006 F11RQ9Y624 299 aaKnown RBP11.01□□□□□ -0.65
USP49-201ENST00000373006 CHEK1O14757 476 aa11□□□□□ -0.65
USP49-201ENST00000373006 TMEM191AQ9H0A3 160 aa11□□□□□ -0.65
USP49-201ENST00000373006 PEF1Q9UBV8 284 aaKnown RBP11□□□□□ -0.65
USP49-201ENST00000373006 K7EMI3 77 aa11□□□□□ -0.65
USP49-201ENST00000373006 FAM87AP0C7U9 286 aa11□□□□□ -0.65
USP49-201ENST00000373006 ATP5IP56385 69 aaPredicted RBP11□□□□□ -0.65
USP49-201ENST00000373006 TNFAIP6P98066 277 aaPredicted RBP11□□□□□ -0.65
USP49-201ENST00000373006 MLST8Q9BVC4 326 aa11□□□□□ -0.65
USP49-201ENST00000373006 IGHG3P01860 377 aa11□□□□□ -0.65
USP49-201ENST00000373006 WT1P19544 449 aaPredicted RBP11□□□□□ -0.65
USP49-201ENST00000373006 HTR1DP28221 377 aa11□□□□□ -0.65
USP49-201ENST00000373006 FXYD7P58549 80 aa11□□□□□ -0.65
USP49-201ENST00000373006 PAX2Q02962 417 aa11□□□□□ -0.65
USP49-201ENST00000373006 C12orf54Q6X4T0 127 aa11□□□□□ -0.65
USP49-201ENST00000373006 DEFB125Q8N687 156 aa11□□□□□ -0.65
USP49-201ENST00000373006 TEX45Q8NA69 505 aa11□□□□□ -0.65
USP49-201ENST00000373006 OSR1Q8TAX0 266 aaPredicted RBP11□□□□□ -0.65
USP49-201ENST00000373006 TMUB1Q9BVT8 246 aa11□□□□□ -0.65
USP49-201ENST00000373006 TPSG1Q9NRR2 321 aa11□□□□□ -0.65
USP49-201ENST00000373006 PRR33A8MZF0 331 aa10.99□□□□□ -0.65
USP49-201ENST00000373006 RHOGP84095 191 aa10.99□□□□□ -0.65
USP49-201ENST00000373006 ZCCHC24Q8N2G6 241 aaKnown RBP10.99□□□□□ -0.65
USP49-201ENST00000373006 CIARTQ8N365 385 aaPredicted RBP10.99□□□□□ -0.65
USP49-201ENST00000373006 MAP1LC3CQ9BXW4 147 aa10.99□□□□□ -0.65
USP49-201ENST00000373006 SSUH2Q9Y2M2 353 aa10.99□□□□□ -0.65
USP49-201ENST00000373006 PRSS57Q6UWY2 283 aa10.99□□□□□ -0.65
USP49-201ENST00000373006 CHCHD1Q96BP2 118 aaKnown RBP10.99□□□□□ -0.65
USP49-201ENST00000373006 RITA1Q96K30 269 aa10.99□□□□□ -0.65
USP49-201ENST00000373006 PRSS22Q9GZN4 317 aa10.99□□□□□ -0.65
USP49-201ENST00000373006 ABCA4P78363 2273 aa10.99□□□□□ -0.65
USP49-201ENST00000373006 KLK10O43240 276 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 AZU1P20160 251 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 CCL8P80075 99 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 TPPP3Q9BW30 176 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 SCRT2Q9NQ03 307 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 DKK4Q9UBT3 224 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 MED13LQ71F56 2210 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 SLC25A17O43808 307 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 GPR183P32249 361 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 RBPMS2Q6ZRY4 209 aaKnown RBP10.98□□□□□ -0.65
USP49-201ENST00000373006 FAM222BQ8WU58 562 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 KLF12Q9Y4X4 402 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 IGHV3-72A0A0B4J1Y9 119 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 SPAARA0A1B0GVQ0 90 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 IGHV1-46P01743 117 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 COL8A1P27658 744 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 ZNF788Q6ZQV5 615 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 ZNF833PQ6ZTB9 187 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 GTF2H5Q6ZYL4 71 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 ZGRF1Q86YA3 2104 aa10.98□□□□□ -0.65
USP49-201ENST00000373006 hADV38S2A0JD32 116 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 LIPFP07098 398 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 GLRXP35754 106 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 FAM162BQ5T6X4 162 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms