RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 FOXF2Q12947 444 aa7.58□□□□□ -1.2
SPTAN1-202ENST00000372731 CD300EQ496F6 205 aaPredicted RBP7.58□□□□□ -1.2
SPTAN1-202ENST00000372731 LINC01559Q495D7 138 aa7.58□□□□□ -1.2
SPTAN1-202ENST00000372731 ST6GALNAC6Q969X2 333 aa7.58□□□□□ -1.2
SPTAN1-202ENST00000372731 LSM4Q9Y4Z0 139 aaKnown RBP7.58□□□□□ -1.2
SPTAN1-202ENST00000372731 TRAV13-1A0A0B4J241 112 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 MYMXA0A1B0GTQ4 84 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 MLNRO43193 412 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 DANCRP0C864 163 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 ZNF474Q6S9Z5 364 aaPredicted RBP7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 MAPK1IP1LQ8NDC0 245 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 IL17DQ8TAD2 202 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 CTHRC1Q96CG8 243 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 LRRC37AA6NMS7 1700 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 IGKV2-40A0A087WW87 121 aaPredicted RBP7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 IGKV2D-40P01614 121 aaPredicted RBP7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 INAFM2P0DMQ5 153 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 BUB1B-PAK6H3BSN5 160 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 IFITM3Q01628 133 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 TMEM249Q2WGJ8 235 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 CACNA1DQ01668 2161 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 DOCK9Q9BZ29 2069 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 DOPEY2Q9Y3R5 2298 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 GATA2P23769 480 aaPredicted RBP7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 DEFB131AP59861 70 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 IFITM2Q01629 132 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 TSSC4Q9Y5U2 329 aaPredicted RBP7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 GBF1Q92538 1859 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 ARFGEF3Q5TH69 2177 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 LDLRAD4O15165 306 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 AZU1P20160 251 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 SLAQ13239 276 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 TAL2Q16559 108 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 C5orf64Q2M2E5 130 aa7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 RPUSD1Q9UJJ7 312 aaKnown RBP7.57□□□□□ -1.2
SPTAN1-202ENST00000372731 NPIPB5A8MRT5 1133 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 PIN1P1O15428 100 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 EFNA2O43921 213 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 SSBP2P81877 361 aaPredicted RBP7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 SMIM2Q9BVW6 85 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 NHP2Q9NX24 153 aaKnown RBP7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 HLA-DQB1P01920 261 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 ATP5L2Q7Z4Y8 100 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 LHFPL4Q7Z7J7 247 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 NABP1Q96AH0 204 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 SLC17A3O00476 420 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 KLF5Q13887 457 aaPredicted RBP7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 TMEM155Q4W5P6 130 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 RHPN1-AS1Q9BWJ2 59 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 TSC2P49815 1807 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 NCKAP5O14513 1909 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 C9orf66Q5T8R8 295 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 SNAI2O43623 268 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 MMP23AO75900 390 aa7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 GTF3AQ92664 365 aaKnown RBP7.56□□□□□ -1.2
SPTAN1-202ENST00000372731 TRAF4Q9BUZ4 470 aaPredicted RBP7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 CACNA1BQ00975 2339 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 A0A087WV48 116 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 PINLYPA6NC86 204 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 XCL2Q9UBD3 114 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 TICRRQ7Z2Z1 1910 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 IGKV2D-24A0A075B6R9 120 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 MPTX1A8MV57 137 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 TMEM14DPA8MWL7 114 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 SLC25A39Q9BZJ4 359 aaPredicted RBP7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 LINC00271P0C7V0 271 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 SLC25A48Q6ZT89 311 aaKnown RBP7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 PRIMA1Q86XR5 153 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 KIAA2026Q5HYC2 2103 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 MGST2Q99735 147 aa7.55□□□□□ -1.2
SPTAN1-202ENST00000372731 NTN3O00634 580 aaPredicted RBP7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 CCL18P55774 89 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 TRAV25A0A0B4J276 109 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 RHODO00212 210 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 RUSC1-AS1Q66K80 236 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 DOCK4Q8N1I0 1966 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 PLXND1Q9Y4D7 1925 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 MGAMO43451 1857 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 RCC1LQ96I51 464 aaKnown RBP7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 FREM3P0C091 2139 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 POLEQ07864 2286 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 F8VVB4 439 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 F8VWA3 439 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 C1orf122Q6ZSJ8 110 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 DMRTC2Q8IXT2 367 aaPredicted RBP7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 MDS2Q8NDY4 140 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 HEPN1Q6WQI6 88 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 CHAC1Q9BUX1 264 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 FOXL1Q12952 345 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 TRPT1Q86TN4 253 aaKnown RBP7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 SMPXQ9UHP9 88 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 IGHV1-69DA0A0B4J2H0 117 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 RAMP3O60896 148 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 IGHV1-69P01742 117 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 PLPPR1Q8TBJ4 325 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 IGF2BP2-AS1Q96M15 143 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 CSTL1Q9H114 145 aa7.54□□□□□ -1.2
SPTAN1-202ENST00000372731 PMS2P5A8MQ11 134 aa7.53□□□□□ -1.2
SPTAN1-202ENST00000372731 ZNF362Q5T0B9 420 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms