RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 GHRHP01286 108 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 TMEM86BQ8N661 226 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 ARHGEF17Q96PE2 2063 aaPredicted RBP18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 PNRC2Q9NPJ4 139 aaKnown RBP18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 TRGV1A0A0A0MS02 117 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 SRRM4A7MD48 611 aaKnown RBP18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 H0YJW9 148 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 CKS1BP61024 79 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 SPAG8Q99932 426 aaPredicted RBP18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 GAFA1Q96PS6 74 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 HIST1H2BLQ99880 126 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 TRAV8-4A0A0B4J246 113 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 LINC00205P59089 165 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 LCTP09848 1927 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 FCN3O75636 299 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 AGMATQ9BSE5 352 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 CYTL1Q9NRR1 136 aa18.15■□□□□ 0.5
TM9SF3-201ENST00000371142 SPTA1P02549 2419 aa18.14■□□□□ 0.5
TM9SF3-201ENST00000371142 TMEM249Q2WGJ8 235 aa18.14■□□□□ 0.5
TM9SF3-201ENST00000371142 M0R2P5 195 aa18.14■□□□□ 0.49
TM9SF3-201ENST00000371142 A0A087WX48 190 aa18.14■□□□□ 0.49
TM9SF3-201ENST00000371142 SH2D1AO60880 128 aa18.14■□□□□ 0.49
TM9SF3-201ENST00000371142 SLC25A2Q9BXI2 301 aa18.14■□□□□ 0.49
TM9SF3-201ENST00000371142 FAM166AQ6J272 317 aa18.13■□□□□ 0.49
TM9SF3-201ENST00000371142 TRGV9Q99603 122 aa18.13■□□□□ 0.49
TM9SF3-201ENST00000371142 CST9LQ9H4G1 147 aa18.13■□□□□ 0.49
TM9SF3-201ENST00000371142 ZNF581Q9P0T4 197 aa18.13■□□□□ 0.49
TM9SF3-201ENST00000371142 GGTLC3B5MD39 225 aa18.13■□□□□ 0.49
TM9SF3-201ENST00000371142 CD5P06127 495 aa18.13■□□□□ 0.49
TM9SF3-201ENST00000371142 MINOS1Q5TGZ0 78 aa18.13■□□□□ 0.49
TM9SF3-201ENST00000371142 MINOS1-NBL1R4GNA1 71 aa18.13■□□□□ 0.49
TM9SF3-201ENST00000371142 LINC00473A8K010 186 aa18.13■□□□□ 0.49
TM9SF3-201ENST00000371142 BUB1B-PAK6H3BSN5 160 aa18.12■□□□□ 0.49
TM9SF3-201ENST00000371142 ZNF329Q86UD4 541 aa18.12■□□□□ 0.49
TM9SF3-201ENST00000371142 UBE2CO00762 179 aa18.12■□□□□ 0.49
TM9SF3-201ENST00000371142 LY6HO94772 140 aa18.12■□□□□ 0.49
TM9SF3-201ENST00000371142 GATD1Q8NB37 220 aa18.12■□□□□ 0.49
TM9SF3-201ENST00000371142 ZNF479Q96JC4 524 aa18.12■□□□□ 0.49
TM9SF3-201ENST00000371142 ZNF138P52744 262 aa18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 MORN3Q6PF18 240 aaPredicted RBP18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 A6NNC1 897 aa18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 C5orf64Q2M2E5 130 aa18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 TRBV7-1A0A0A6YYK4 115 aa18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 B4DSR2 109 aa18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 NMSQ5H8A3 153 aa18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 ERG28Q9UKR5 140 aa18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 A0A0G2JMZ2 1700 aa18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 LRRC37A2A6NM11 1700 aa18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 LYPD2Q6UXB3 125 aa18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 ASCL4Q6XD76 172 aa18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 RPP25LQ8N5L8 163 aaKnown RBP18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 LSM4Q9Y4Z0 139 aaKnown RBP18.11■□□□□ 0.49
TM9SF3-201ENST00000371142 DEFB121Q5J5C9 76 aa18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 SAMD5Q5TGI4 173 aa18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 UBE2E2Q96LR5 201 aa18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 NAA38Q9BRA0 125 aaKnown RBP18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 WNK3Q9BYP7 1800 aa18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 COL8A2P25067 703 aa18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 NTF4P34130 210 aa18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 SPSB3Q6PJ21 355 aa18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 HIST3H2BBQ8N257 126 aa18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 HSD52Q0P140 79 aa18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 PIP4P2Q8N4L2 257 aa18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 LINC01551Q86U37 167 aa18.1■□□□□ 0.49
TM9SF3-201ENST00000371142 Q6P435 159 aa18.09■□□□□ 0.49
TM9SF3-201ENST00000371142 LCN12Q6JVE5 192 aa18.09■□□□□ 0.49
TM9SF3-201ENST00000371142 GLRX5Q86SX6 157 aa18.09■□□□□ 0.49
TM9SF3-201ENST00000371142 MDS2Q8NDY4 140 aa18.09■□□□□ 0.49
TM9SF3-201ENST00000371142 WDR90Q96KV7 1748 aa18.09■□□□□ 0.49
TM9SF3-201ENST00000371142 A8MWV9 139 aa18.09■□□□□ 0.49
TM9SF3-201ENST00000371142 JPT2Q9H910 190 aa18.09■□□□□ 0.49
TM9SF3-201ENST00000371142 AMBPP02760 352 aa18.09■□□□□ 0.49
TM9SF3-201ENST00000371142 LCNL1Q6ZST4 164 aa18.09■□□□□ 0.49
TM9SF3-201ENST00000371142 TMEM242Q9NWH2 141 aa18.09■□□□□ 0.49
TM9SF3-201ENST00000371142 C20orf204Q6ZNR8 217 aa18.09■□□□□ 0.49
TM9SF3-201ENST00000371142 IGKV1D-17A0A075B6S4 117 aa18.08■□□□□ 0.49
TM9SF3-201ENST00000371142 PAX4O43316 350 aa18.08■□□□□ 0.49
TM9SF3-201ENST00000371142 KLHL30-AS1Q8NEE0 82 aa18.08■□□□□ 0.49
TM9SF3-201ENST00000371142 RPL36AP83881 106 aaKnown RBP18.08■□□□□ 0.48
TM9SF3-201ENST00000371142 ATXN8Q156A1 80 aa18.08■□□□□ 0.48
TM9SF3-201ENST00000371142 PSG3Q16557 428 aa18.08■□□□□ 0.48
TM9SF3-201ENST00000371142 RPL36ALQ969Q0 106 aaKnown RBP18.08■□□□□ 0.48
TM9SF3-201ENST00000371142 TMEM14EPQ6UXP3 125 aa18.08■□□□□ 0.48
TM9SF3-201ENST00000371142 NUP35Q8NFH5 326 aa18.08■□□□□ 0.48
TM9SF3-201ENST00000371142 CMC4P56277 68 aaPredicted RBP18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 TRAV8-1A0A0A6YYK1 113 aa18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 M0R1W7 72 aa18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 C14orf178Q8N769 122 aaPredicted RBP18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 RNF5Q99942 180 aa18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 SIGLEC9Q9Y336 463 aa18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 TRBV24-1A0A075B6N3 115 aa18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 TEX43Q6ZNM6 134 aa18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 C9orf139Q6ZV77 190 aa18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 C17orf82Q86X59 251 aaPredicted RBP18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 BMPERQ8N8U9 685 aa18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 TMEM238C9JI98 176 aa18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 SMPXQ9UHP9 88 aa18.07■□□□□ 0.48
TM9SF3-201ENST00000371142 COLCA2A8K830 154 aa18.06■□□□□ 0.48
TM9SF3-201ENST00000371142 OOSP1A8MZH6 123 aa18.06■□□□□ 0.48
TM9SF3-201ENST00000371142 hDV102S1A0JD36 115 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms