RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 IGLL1P15814 213 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 GCHFRP30047 84 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 OR8I2Q8N0Y5 310 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 OR4F17Q8NGA8 305 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 OR52E5Q8NH55 327 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 NEU4Q8WWR8 484 aaPredicted RBP8.56□□□□□ -1.04
TPM3-212ENST00000368533 DDB2Q92466 427 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 YTHDF2Q9Y5A9 579 aaKnown RBP8.56□□□□□ -1.04
TPM3-212ENST00000368533 SONP18583 2426 aaKnown RBP8.56□□□□□ -1.04
TPM3-212ENST00000368533 MT-CO2P00403 227 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 STAG3L2P0CL84 134 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 STAG3L3P0CL85 134 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 PSG5Q15238 335 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 MLANAQ16655 118 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 RTL8BQ17RB0 113 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 C19orf35Q6ZS72 473 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 NIT1Q86X76 327 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 OR10W1Q8NGF6 305 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 NAA38Q9BRA0 125 aaKnown RBP8.56□□□□□ -1.04
TPM3-212ENST00000368533 APCP25054 2843 aa8.56□□□□□ -1.04
TPM3-212ENST00000368533 MUC21A0A0G2JKD1 596 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 MUC21A0A140T8X8 626 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 FAM90A9PA6NNJ1 464 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 TAX1BP3O14907 124 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 NUDT3O95989 172 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 SAA1P0DJI8 122 aaPredicted RBP8.55□□□□□ -1.04
TPM3-212ENST00000368533 MUC21Q5SSG8 566 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 OR10G8Q8NGN5 311 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 WFDC12Q8WWY7 111 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 SLC25A17O43808 307 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 OR10J4P0C629 311 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 CD99P14209 185 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 SRIP30626 198 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 EFNA4P52798 201 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 ATP5J2P56134 94 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 MIR17HGQ75NE6 70 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 OR2D3Q8NGH3 330 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 OR9G1Q8NH87 305 aa8.55□□□□□ -1.04
TPM3-212ENST00000368533 MCRIP2Q9BUT9 160 aaKnown RBP8.55□□□□□ -1.04
TPM3-212ENST00000368533 E7EUB6 86 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 GNG7O60262 68 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 REG1AP05451 166 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 KRTAP10-9P60411 292 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 KIR3DL3Q8N743 410 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 ADTRPQ96IZ2 230 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 GCN1Q92616 2671 aaKnown RBP8.54□□□□□ -1.04
TPM3-212ENST00000368533 H0YJW9 148 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 LIPFP07098 398 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 FXYD3Q14802 87 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 MRPL54Q6P161 138 aaKnown RBP8.54□□□□□ -1.04
TPM3-212ENST00000368533 KLHDC1Q8N7A1 406 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 PRNDQ9UKY0 176 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 TRAV8-6A0A0B4J262 113 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 K7EN84 100 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 ESDP10768 282 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 PRRX1P54821 245 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 LGALS4P56470 323 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 NABP2Q9BQ15 211 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 COMMD5Q9GZQ3 224 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 TMEM14BQ9NUH8 114 aa8.54□□□□□ -1.04
TPM3-212ENST00000368533 FOXA2Q9Y261 457 aaPredicted RBP8.54□□□□□ -1.04
TPM3-212ENST00000368533 MRPS16Q9Y3D3 137 aaKnown RBP8.54□□□□□ -1.04
TPM3-212ENST00000368533 ITPR2Q14571 2701 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 K7ERU9 68 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 SNAI2O43623 268 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 APOA2P02652 100 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 PSG9Q00887 426 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 SPATA12Q7Z6I5 190 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 RPEQ96AT9 228 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 BORCS7Q96B45 105 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 FLYWCH2Q96CP2 140 aaKnown RBP8.53□□□□□ -1.04
TPM3-212ENST00000368533 INSIG2Q9Y5U4 225 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 PRSS46E5RG02 174 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 ZNF324O75467 553 aaPredicted RBP8.53□□□□□ -1.04
TPM3-212ENST00000368533 CRYBB3P26998 211 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 ZNF833PQ6ZTB9 187 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 LINC00574Q9H8X3 128 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 CREBBPQ92793 2442 aa8.53□□□□□ -1.04
TPM3-212ENST00000368533 PRRC2AP48634 2157 aaKnown RBP8.53□□□□□ -1.04
TPM3-212ENST00000368533 IGHV3-21A0A0B4J1V1 117 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 MGST1P10620 155 aaKnown RBP8.52□□□□□ -1.05
TPM3-212ENST00000368533 FOXE3Q13461 319 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 HES1Q14469 280 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 PMCHL1Q16048 86 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 VMO1Q7Z5L0 202 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 KCNS1Q96KK3 526 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 SERTAD4Q9NUC0 356 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 LSM4Q9Y4Z0 139 aaKnown RBP8.52□□□□□ -1.05
TPM3-212ENST00000368533 ACANP16112 2415 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 TEX15Q9BXT5 2789 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 IGHV4-61A0A0C4DH41 118 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 CORTO00230 105 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 NBEAP1P0C6P0 100 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 MMD2Q8IY49 270 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.52□□□□□ -1.05
TPM3-212ENST00000368533 OR1N2Q8NGR9 330 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 TSKUQ8WUA8 353 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 C1orf159Q96HA4 380 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 CLEC5AQ9NY25 188 aa8.52□□□□□ -1.05
TPM3-212ENST00000368533 KMT2BQ9UMN6 2715 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms