RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 CBLN1P23435 193 aa14.18□□□□□ -0.14
LMNA-204ENST00000368298 RND2P52198 227 aa14.18□□□□□ -0.14
LMNA-204ENST00000368298 SCGB2A1O75556 95 aa14.17□□□□□ -0.14
LMNA-204ENST00000368298 IGKV1-17P01599 117 aa14.17□□□□□ -0.14
LMNA-204ENST00000368298 IGLC1P0CG04 106 aa14.17□□□□□ -0.14
LMNA-204ENST00000368298 FOLR2P14207 255 aa14.17□□□□□ -0.14
LMNA-204ENST00000368298 DEFA6Q01524 100 aa14.17□□□□□ -0.14
LMNA-204ENST00000368298 GAMTQ14353 236 aa14.17□□□□□ -0.14
LMNA-204ENST00000368298 VWC2Q2TAL6 325 aa14.17□□□□□ -0.14
LMNA-204ENST00000368298 NPIPB3Q92617 1050 aa14.17□□□□□ -0.14
LMNA-204ENST00000368298 NARS2Q96I59 477 aaKnown RBP14.17□□□□□ -0.14
LMNA-204ENST00000368298 AGPAT2O15120 278 aa14.16□□□□□ -0.14
LMNA-204ENST00000368298 FGF7P21781 194 aa14.16□□□□□ -0.14
LMNA-204ENST00000368298 YPEL3P61236 119 aaPredicted RBP14.16□□□□□ -0.14
LMNA-204ENST00000368298 SRSF3P84103 164 aaKnown RBP14.16□□□□□ -0.14
LMNA-204ENST00000368298 TM4SF20Q53R12 229 aa14.16□□□□□ -0.14
LMNA-204ENST00000368298 DPPA3Q6W0C5 159 aa14.16□□□□□ -0.14
LMNA-204ENST00000368298 ZNF600Q6ZNG1 722 aa14.16□□□□□ -0.14
LMNA-204ENST00000368298 TREM1Q9NP99 234 aa14.16□□□□□ -0.14
LMNA-204ENST00000368298 DAZ1Q9NQZ3 744 aaKnown RBP14.16□□□□□ -0.14
LMNA-204ENST00000368298 MRPL27Q9P0M9 148 aaKnown RBP14.16□□□□□ -0.14
LMNA-204ENST00000368298 TIMM9Q9Y5J7 89 aa14.16□□□□□ -0.14
LMNA-204ENST00000368298 AKR1C1Q04828 323 aa14.15□□□□□ -0.14
LMNA-204ENST00000368298 OR2K2Q8NGT1 345 aa14.15□□□□□ -0.14
LMNA-204ENST00000368298 TMEM231Q9H6L2 316 aa14.15□□□□□ -0.14
LMNA-204ENST00000368298 TECRQ9NZ01 308 aaKnown RBP14.15□□□□□ -0.14
LMNA-204ENST00000368298 OR10J1P30954 320 aa14.14□□□□□ -0.15
LMNA-204ENST00000368298 AURKAIP1Q9NWT8 199 aaPredicted RBP14.14□□□□□ -0.15
LMNA-204ENST00000368298 TMEM218A2RU14 115 aa14.13□□□□□ -0.15
LMNA-204ENST00000368298 EDN2P20800 178 aa14.13□□□□□ -0.15
LMNA-204ENST00000368298 DLK1P80370 383 aa14.13□□□□□ -0.15
LMNA-204ENST00000368298 SERF2P84101 59 aa14.13□□□□□ -0.15
LMNA-204ENST00000368298 DEFB114Q30KQ6 69 aa14.13□□□□□ -0.15
LMNA-204ENST00000368298 TOMM20LQ6UXN7 152 aa14.13□□□□□ -0.15
LMNA-204ENST00000368298 ACY3Q96HD9 319 aa14.13□□□□□ -0.15
LMNA-204ENST00000368298 SLC35E1Q96K37 410 aa14.13□□□□□ -0.15
LMNA-204ENST00000368298 ZFAND3Q9H8U3 227 aa14.13□□□□□ -0.15
LMNA-204ENST00000368298 ZNF256Q9Y2P7 627 aaPredicted RBP14.13□□□□□ -0.15
LMNA-204ENST00000368298 PUS1Q9Y606 427 aaKnown RBP eCLIP14.13□□□□□ -0.15
LMNA-204ENST00000368298 SORL1Q92673 2214 aa14.13□□□□□ -0.15
LMNA-204ENST00000368298 A0A1B0GV50 99 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 H2AFB1P0C5Y9 115 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 TIGITQ495A1 244 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 C20orf24Q9BUV8 137 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 GGACTQ9BVM4 153 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 IGKV1D-37A0A075B6S9 117 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 SMCO3A2RU48 225 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 FNDC10F2Z333 226 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 YIF1AO95070 293 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 PRB2P02812 416 aaPredicted RBP14.12□□□□□ -0.15
LMNA-204ENST00000368298 CD5P06127 495 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 TMEM41BQ5BJD5 291 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 THAP8Q8NA92 274 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 VSIRQ9H7M9 311 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 RPRMQ9NS64 109 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 MLXQ9UH92 298 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 WDR83OSQ9Y284 106 aa14.12□□□□□ -0.15
LMNA-204ENST00000368298 HBE1P02100 147 aa14.11□□□□□ -0.15
LMNA-204ENST00000368298 GUK1Q16774 197 aa14.11□□□□□ -0.15
LMNA-204ENST00000368298 LCN12Q6JVE5 192 aa14.11□□□□□ -0.15
LMNA-204ENST00000368298 ZNF709Q8N972 641 aa14.11□□□□□ -0.15
LMNA-204ENST00000368298 DYNLRB2Q8TF09 96 aa14.11□□□□□ -0.15
LMNA-204ENST00000368298 Q8WTZ3 238 aa14.11□□□□□ -0.15
LMNA-204ENST00000368298 SMPXQ9UHP9 88 aa14.11□□□□□ -0.15
LMNA-204ENST00000368298 IGKV1OR2-108A0A075B7D4 117 aa14.1□□□□□ -0.15
LMNA-204ENST00000368298 IGHV3OR16-8A0A075B7F1 116 aa14.1□□□□□ -0.15
LMNA-204ENST00000368298 C17orf112F2Z3M2 114 aa14.1□□□□□ -0.15
LMNA-204ENST00000368298 SCO1O75880 301 aa14.1□□□□□ -0.15
LMNA-204ENST00000368298 TOMM40O96008 361 aa14.1□□□□□ -0.15
LMNA-204ENST00000368298 RAB2AP61019 212 aa14.1□□□□□ -0.15
LMNA-204ENST00000368298 PEA15Q15121 130 aa14.1□□□□□ -0.15
LMNA-204ENST00000368298 CD300EQ496F6 205 aaPredicted RBP14.1□□□□□ -0.15
LMNA-204ENST00000368298 TRGV9Q99603 122 aa14.1□□□□□ -0.15
LMNA-204ENST00000368298 NPCDR1Q9BY65 106 aa14.1□□□□□ -0.15
LMNA-204ENST00000368298 IGHV7-4-1A0A0J9YVY3 117 aa14.09□□□□□ -0.15
LMNA-204ENST00000368298 APOC3P02656 99 aa14.09□□□□□ -0.15
LMNA-204ENST00000368298 RD3LP0DJH9 198 aa14.09□□□□□ -0.15
LMNA-204ENST00000368298 GP9P14770 177 aa14.09□□□□□ -0.15
LMNA-204ENST00000368298 FFAR4Q5NUL3 377 aa14.09□□□□□ -0.15
LMNA-204ENST00000368298 TMEM144Q7Z5S9 345 aa14.09□□□□□ -0.15
LMNA-204ENST00000368298 SFT2D1Q8WV19 159 aa14.09□□□□□ -0.15
LMNA-204ENST00000368298 PBDC1Q9BVG4 233 aa14.09□□□□□ -0.15
LMNA-204ENST00000368298 SCRT1Q9BWW7 348 aa14.09□□□□□ -0.15
LMNA-204ENST00000368298 TRAV25A0A0B4J276 109 aa14.08□□□□□ -0.16
LMNA-204ENST00000368298 WI2-2373I1.2A0A1W2PRP0 233 aa14.08□□□□□ -0.16
LMNA-204ENST00000368298 IZUMO1RA6ND01 250 aa14.08□□□□□ -0.16
LMNA-204ENST00000368298 ZFP92A6NM28 416 aa14.08□□□□□ -0.16
LMNA-204ENST00000368298 F8W036 122 aa14.08□□□□□ -0.16
LMNA-204ENST00000368298 MPDU1O75352 247 aa14.08□□□□□ -0.16
LMNA-204ENST00000368298 ADCYAP1P18509 176 aa14.08□□□□□ -0.16
LMNA-204ENST00000368298 CCL20P78556 96 aa14.08□□□□□ -0.16
LMNA-204ENST00000368298 EIF5A2Q9GZV4 153 aaKnown RBP14.08□□□□□ -0.16
LMNA-204ENST00000368298 TRAV1-1A0A0B4J248 108 aa14.07□□□□□ -0.16
LMNA-204ENST00000368298 ZNF785A8K8V0 405 aa14.07□□□□□ -0.16
LMNA-204ENST00000368298 C9JQL5 133 aa14.07□□□□□ -0.16
LMNA-204ENST00000368298 K7EIL1 84 aa14.07□□□□□ -0.16
LMNA-204ENST00000368298 CHEK1O14757 476 aa14.07□□□□□ -0.16
LMNA-204ENST00000368298 ZNF207O43670 478 aaKnown RBP14.07□□□□□ -0.16
LMNA-204ENST00000368298 MBP02144 154 aa14.07□□□□□ -0.16
LMNA-204ENST00000368298 FABP1P07148 127 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms