RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 KLHDC3Q9BQ90 382 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 DPM3Q9P2X0 92 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 NUPR1O60356 82 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 CLPSP04118 112 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 CELA3BP08861 270 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 C1orf122Q6ZSJ8 110 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 FOXA2Q9Y261 457 aaPredicted RBP10.09□□□□□ -0.79
SHPRH-202ENST00000367503 TRAV12-3A0A0B4J271 114 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 CFHR1Q03591 330 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 ATXN8Q156A1 80 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 FGFBP3Q8TAT2 258 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 EP300Q09472 2414 aaPredicted RBP10.09□□□□□ -0.79
SHPRH-202ENST00000367503 FAM201AQ5SY85 155 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 GFRA4Q9GZZ7 299 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 FBXL15Q9H469 300 aa10.09□□□□□ -0.79
SHPRH-202ENST00000367503 GAGE5Q13069 117 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 GAGE6Q13070 117 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 LYZL1Q6UWQ5 148 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 FOXF2Q12947 444 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 C9orf153Q5TBE3 101 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 C2orf82Q6UX34 121 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 WFDC12Q8WWY7 111 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 EEF1AKMT3Q96AZ1 226 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 MBNL3Q9NUK0 354 aaKnown RBP10.08□□□□□ -0.8
SHPRH-202ENST00000367503 ROS1P08922 2347 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 SMIM27A0A1W2PRY6 76 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 WIPF3A6NGB9 483 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 ATP5G2Q06055 141 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 FAM106AQ4KMX7 169 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 ASCL2Q99929 193 aa10.08□□□□□ -0.8
SHPRH-202ENST00000367503 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.07□□□□□ -0.8
SHPRH-202ENST00000367503 PRR19A6NJB7 356 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 SP9P0CG40 484 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 APOBEC3AP31941 199 aaPredicted RBP10.07□□□□□ -0.8
SHPRH-202ENST00000367503 SRSF6Q13247 344 aaKnown RBP10.07□□□□□ -0.8
SHPRH-202ENST00000367503 ZNF562Q6V9R5 426 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 PRR7Q8TB68 274 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 DYNLRB2Q8TF09 96 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 GFRA3O60609 400 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 IFITM1P13164 125 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 CSRP1P21291 193 aaKnown RBP10.07□□□□□ -0.8
SHPRH-202ENST00000367503 ASCL4Q6XD76 172 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 LINC00479Q96M42 142 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 C21orf62Q9NYP8 219 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 RHOGP84095 191 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 PRSS57Q6UWY2 283 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 LCNL1Q6ZST4 164 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 SPACA3Q8IXA5 215 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 C8orf46Q8TAG6 207 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 VGLL1Q99990 258 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 CASP8AP2Q9UKL3 1982 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 C9JAW5 83 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 ZNF329Q86UD4 541 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 TMEM190Q8WZ59 177 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 EDA2RQ9HAV5 297 aa10.07□□□□□ -0.8
SHPRH-202ENST00000367503 B5MCH6 92 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 GAGE12JA6NER3 117 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 GAGE7O76087 117 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 GAGE12FP0CL80 117 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 GAGE12GP0CL81 117 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 GAGE12IP0CL82 117 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 ZFP36L1Q07352 338 aaKnown RBP10.06□□□□□ -0.8
SHPRH-202ENST00000367503 GAGE4Q13068 117 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 DOCK11Q5JSL3 2073 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 H7C1H1 209 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 FAM27E3Q08E93 113 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 TEX48A0A1B0GUV7 120 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 H3BMG7 143 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 FAM159AQ6UWV7 190 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 GGNQ86UU5 652 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 SLC25A39Q9BZJ4 359 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-202ENST00000367503 SPTBN2O15020 2390 aa10.06□□□□□ -0.8
SHPRH-202ENST00000367503 IGHV3-35A0A0C4DH35 117 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 C17orf100A8MU93 164 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 TOMM40O96008 361 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 YAE1D1Q9NRH1 226 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 TRAV3A0A0B4J244 114 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 PRSS47A8MTI9 375 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 SIVA1O15304 175 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 PPIFP30405 207 aaKnown RBP10.05□□□□□ -0.8
SHPRH-202ENST00000367503 PLAURQ03405 335 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 WNK2Q9Y3S1 2297 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 IGKV3-15P01624 115 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 SUMO2P61956 95 aaKnown RBP10.05□□□□□ -0.8
SHPRH-202ENST00000367503 VWC2Q2TAL6 325 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 TMEM158Q8WZ71 300 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 LGALS9BQ3B8N2 356 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 ANKRD39Q53RE8 183 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 LGALS9CQ6DKI2 356 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 C9orf106Q8NAJ2 232 aa10.05□□□□□ -0.8
SHPRH-202ENST00000367503 PTPRDP23468 1912 aa10.04□□□□□ -0.8
SHPRH-202ENST00000367503 TRBV20-1A0A075B6N2 111 aa10.04□□□□□ -0.8
SHPRH-202ENST00000367503 RNF182Q8N6D2 247 aa10.04□□□□□ -0.8
SHPRH-202ENST00000367503 S4R3C0 116 aa10.04□□□□□ -0.8
SHPRH-202ENST00000367503 MYLKQ15746 1914 aa10.04□□□□□ -0.8
SHPRH-202ENST00000367503 M0R2P5 195 aa10.04□□□□□ -0.8
SHPRH-202ENST00000367503 PVRIGQ6DKI7 326 aa10.04□□□□□ -0.8
SHPRH-202ENST00000367503 AMN1Q8IY45 258 aa10.04□□□□□ -0.8
SHPRH-202ENST00000367503 TMEM101Q96IK0 257 aa10.04□□□□□ -0.8
SHPRH-202ENST00000367503 DENND4AQ7Z401 1863 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 1501 ms