RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 CRYBA2P53672 197 aa7.4□□□□□ -1.23
SYNE1-209ENST00000367257 PSG7Q13046 419 aa7.4□□□□□ -1.23
SYNE1-209ENST00000367257 MST1LQ2TV78 715 aa7.4□□□□□ -1.23
SYNE1-209ENST00000367257 C1QL2Q7Z5L3 287 aa7.4□□□□□ -1.23
SYNE1-209ENST00000367257 ERG28Q9UKR5 140 aa7.4□□□□□ -1.23
SYNE1-209ENST00000367257 SAA2-SAA4A0A096LPE2 208 aa7.4□□□□□ -1.23
SYNE1-209ENST00000367257 SAA2P0DJI9 122 aaPredicted RBP7.4□□□□□ -1.23
SYNE1-209ENST00000367257 CRYGSP22914 178 aa7.4□□□□□ -1.23
SYNE1-209ENST00000367257 PGPEP1Q9NXJ5 209 aa7.4□□□□□ -1.23
SYNE1-209ENST00000367257 TRIP11Q15643 1979 aa7.4□□□□□ -1.23
SYNE1-209ENST00000367257 REG1AP05451 166 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 RBX1P62877 108 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 NEGR1Q7Z3B1 354 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 C18orf15Q96N68 181 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 CLUHP3Q96NS8 147 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 TSC2P49815 1807 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 SAP30O75446 220 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 IGHV4-39P01824 125 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 TMEM14EPQ6UXP3 125 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 RASL10AQ92737 203 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 CEP250Q9BV73 2442 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 A0A1W2PPM0 123 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 Q0VG73 95 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 CGB1A6NKQ9 187 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 PATE3B3GLJ2 98 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 PDE6HQ13956 83 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 ZNRF1Q8ND25 227 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 ABHD17AQ96GS6 310 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 LINC00477Q96M19 166 aa7.39□□□□□ -1.23
SYNE1-209ENST00000367257 RANBP2P49792 3224 aaKnown RBP7.39□□□□□ -1.23
SYNE1-209ENST00000367257 TRBV20-1A0A075B6N2 111 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 SYS1-DBNDD2H3BUS1 97 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 CRPP02741 224 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 NUP214P35658 2090 aaPredicted RBP7.38□□□□□ -1.23
SYNE1-209ENST00000367257 IGLC7A0M8Q6 106 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 PRR32B1ATL7 298 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 C9JQL5 133 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 BMPERQ8N8U9 685 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 TDRD15B5MCY1 1934 aaKnown RBP7.38□□□□□ -1.23
SYNE1-209ENST00000367257 ZNF815PA8K554 130 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 M0R2P5 195 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 IGHV1-2P23083 117 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 KLF17Q5JT82 389 aaPredicted RBP7.38□□□□□ -1.23
SYNE1-209ENST00000367257 PEAR1Q5VY43 1037 aaPredicted RBP7.38□□□□□ -1.23
SYNE1-209ENST00000367257 Q6ZWC4 215 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 RPUSD1Q9UJJ7 312 aaKnown RBP7.38□□□□□ -1.23
SYNE1-209ENST00000367257 SCN10AQ9Y5Y9 1956 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 GVINP1Q7Z2Y8 2422 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 NDUFC2O95298 119 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 BVES-AS1Q5T3Y7 98 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 LINC01587Q99440 93 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 WFDC1Q9HC57 220 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 ZDBF2Q9HCK1 2354 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 ZNF492Q9P255 531 aa7.38□□□□□ -1.23
SYNE1-209ENST00000367257 MUC3AQ02505 3323 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 G3V4G9 280 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 CSRP1P21291 193 aaKnown RBP7.37□□□□□ -1.23
SYNE1-209ENST00000367257 MESP2Q0VG99 397 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 OCC1Q8TAD7 63 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 SPAG17Q6Q759 2223 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 M0R1W7 72 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 TCTEX1D4Q5JR98 221 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 FAM168AQ92567 244 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 TRBV7-1A0A0A6YYK4 115 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 LOC101059948A0A1B0GTJ6 334 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 SRRM5B3KS81 715 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 NAPSAO96009 420 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 VCYO14598 125 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 SMAD7O15105 426 aaKnown RBP7.37□□□□□ -1.23
SYNE1-209ENST00000367257 NDUFA3O95167 84 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 RNASE1P07998 156 aaKnown RBP7.37□□□□□ -1.23
SYNE1-209ENST00000367257 MALP21145 153 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 NMSQ5H8A3 153 aa7.37□□□□□ -1.23
SYNE1-209ENST00000367257 ANKRD36A6QL64 1941 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 RNASE4P34096 147 aaKnown RBP7.36□□□□□ -1.23
SYNE1-209ENST00000367257 TREML4Q6UXN2 200 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 C1orf122Q6ZSJ8 110 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 MRAPQ8TCY5 172 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 USMG5Q96IX5 58 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 DPH3P1Q9H4G8 78 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 PATJQ8NI35 1801 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 IGHV3OR16-12A0A075B7B8 117 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 PRR19A6NJB7 356 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 IGKV3-15P01624 115 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 CD28P10747 220 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 DEFB125Q8N687 156 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 PRADC1Q9BSG0 188 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 COLQQ9Y215 455 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-209ENST00000367257 RFNGQ9Y644 331 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 FAM186AA6NE01 2351 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 C3orf36Q3SXR2 165 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 FOXL2NBQ6ZUU3 175 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 PAQR4Q8N4S7 273 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-209ENST00000367257 FAM216BQ8N7L0 139 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 LEAP2Q969E1 77 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 IGKV1-9A0A0C4DH69 117 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 FAM223BA6NKX1 122 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 E9PLN8 166 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 Q6ZVH6 145 aa7.36□□□□□ -1.23
SYNE1-209ENST00000367257 FAM223AQ8IWN6 122 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms