RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 FAM216BQ8N7L0 139 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 J3QRE1 110 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 PRTN3P24158 256 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 ID3Q02535 119 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 SSC4DQ8WTU2 575 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 REPIN1Q9BWE0 567 aaKnown RBP6.1□□□□□ -1.43
SYNE1-208ENST00000367256 GATA2P23769 480 aaPredicted RBP6.1□□□□□ -1.43
SYNE1-208ENST00000367256 GLRXP35754 106 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 UBE2V1Q13404 147 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 GLRX5Q86SX6 157 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 UMODP07911 640 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 CD300EQ496F6 205 aaPredicted RBP6.1□□□□□ -1.43
SYNE1-208ENST00000367256 COX11Q9Y6N1 276 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 FABP5P3A8MUU1 101 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 ATP1A1-AS1Q5TC04 95 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 IFI27L1Q96BM0 104 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 PAX4O43316 350 aa6.1□□□□□ -1.43
SYNE1-208ENST00000367256 YPEL1O60688 119 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 CT83Q5H943 113 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 YPEL2Q96QA6 119 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 MRPS18CQ9Y3D5 142 aaKnown RBP6.09□□□□□ -1.43
SYNE1-208ENST00000367256 CELA3BP08861 270 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 GZMBP10144 247 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 A0A0U1RRA0 63 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 C2orf82Q6UX34 121 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 THSD7AQ9UPZ6 1657 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 MRAPQ8TCY5 172 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 REG4Q9BYZ8 158 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 CRIM1Q9NZV1 1036 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 IGHV3-73A0A0B4J1V6 119 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 DUSP14O95147 198 aaKnown RBP6.09□□□□□ -1.43
SYNE1-208ENST00000367256 C1QL2Q7Z5L3 287 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 SP7Q8TDD2 431 aaPredicted RBP6.09□□□□□ -1.43
SYNE1-208ENST00000367256 SLC25A28Q96A46 364 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 CHCHD2Q9Y6H1 151 aaPredicted RBP6.09□□□□□ -1.43
SYNE1-208ENST00000367256 NLRC5Q86WI3 1866 aa6.09□□□□□ -1.43
SYNE1-208ENST00000367256 PRADC1Q9BSG0 188 aa6.09□□□□□ -1.44
SYNE1-208ENST00000367256 SLC25A45Q8N413 288 aa6.09□□□□□ -1.44
SYNE1-208ENST00000367256 SAP25Q8TEE9 199 aa6.09□□□□□ -1.44
SYNE1-208ENST00000367256 C7orf69Q9H7B7 122 aa6.09□□□□□ -1.44
SYNE1-208ENST00000367256 PYYP10082 97 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 RPL32P62910 135 aaKnown RBP6.08□□□□□ -1.44
SYNE1-208ENST00000367256 SRSF3P84103 164 aaKnown RBP6.08□□□□□ -1.44
SYNE1-208ENST00000367256 ZNF497Q6ZNH5 498 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 TEX43Q6ZNM6 134 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 NSUN5P1Q3KNT7 163 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 OCIAD2Q56VL3 154 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 KLF17Q5JT82 389 aaPredicted RBP6.08□□□□□ -1.44
SYNE1-208ENST00000367256 SUMO4Q6EEV6 95 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 C1orf122Q6ZSJ8 110 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 KLF12Q9Y4X4 402 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 OBSL1O75147 1896 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 D6R8Y8 96 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 ERCC8Q13216 396 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 NEU4Q8WWR8 484 aaPredicted RBP6.08□□□□□ -1.44
SYNE1-208ENST00000367256 WDR90Q96KV7 1748 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 IGLV3-32A0A0A0MS00 114 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 PLEKHB2Q96CS7 222 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 C20orf144Q9BQM9 153 aa6.08□□□□□ -1.44
SYNE1-208ENST00000367256 FNDC1Q4ZHG4 1894 aaPredicted RBP6.08□□□□□ -1.44
SYNE1-208ENST00000367256 KIF26AQ9ULI4 1882 aaPredicted RBP6.08□□□□□ -1.44
SYNE1-208ENST00000367256 A0A0G2JMM0 328 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 A0A1W2PPB8 328 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 KIR3DP1A8MWS1 328 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 LYL1P12980 280 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 LHFPL4Q7Z7J7 247 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 GREM1O60565 184 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 FAM201AQ5SY85 155 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 RPRMLQ8N4K4 120 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 IMMP1LQ96LU5 166 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 DEPPQ9NTK1 212 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 MALRD1Q5VYJ5 2156 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 IGKV2-40A0A087WW87 121 aaPredicted RBP6.07□□□□□ -1.44
SYNE1-208ENST00000367256 IQCF6A8MYZ5 107 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 IGKV2D-40P01614 121 aaPredicted RBP6.07□□□□□ -1.44
SYNE1-208ENST00000367256 TPTE2P1Q5T6R2 138 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 GGTLC1Q9BX51 225 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 INS-IGF2F8WCM5 200 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 UPK2O00526 184 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 OVOL1O14753 267 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 INSP01308 110 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 GUSBP1Q15486 140 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 TMEM133Q9H2Q1 129 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 WDR83OSQ9Y284 106 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 TNS1Q9HBL0 1735 aaKnown RBP6.07□□□□□ -1.44
SYNE1-208ENST00000367256 H0YIZ8 118 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 NCR2O95944 276 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 LHFPL1Q86WI0 220 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 SLC25A39Q9BZJ4 359 aaPredicted RBP6.07□□□□□ -1.44
SYNE1-208ENST00000367256 FNDC10F2Z333 226 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 CELA3AP09093 270 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 RFPL3SP0C7P2 107 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 PRCDQ00LT1 54 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 EFNB3Q15768 340 aa6.07□□□□□ -1.44
SYNE1-208ENST00000367256 PRB3Q04118 309 aaPredicted RBP6.07□□□□□ -1.44
SYNE1-208ENST00000367256 PSCAO43653 123 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 OR10W1Q8NGF6 305 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 MMP23AO75900 390 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 SRD5A1P18405 259 aa6.06□□□□□ -1.44
SYNE1-208ENST00000367256 RPL15P61313 204 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms