RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PRO1854Q9UHT4 67 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 A0A087WZ39 114 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 CRYGCP07315 174 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 PRSS2P07478 247 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 GNB1P62873 340 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF841Q6ZN19 808 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 CYTL1Q9NRR1 136 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 PILRAQ9UKJ1 303 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 TMSB15BA0A087X1C1 80 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 SYNGR3O43761 229 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 LYZL6O75951 148 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 FXYD7P58549 80 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 YPEL4Q96NS1 127 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 C4BP0C0L5 1744 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 LAIR2Q6ISS4 152 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 PEMTQ9UBM1 199 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 PHLPP1O60346 1717 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 ERC2-IT1O76042 136 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 CRYGBP07316 175 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 PHLDA1Q8WV24 401 aaPredicted RBP3.09□□□□□ -1.91
SYNE1-207ENST00000367255 GAGE2AQ6NT46 116 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 MRGPRFQ96AM1 343 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 F8VRH5 84 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 EBLN2Q6P2I7 272 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 LILRA6Q6PI73 481 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 CXorf67Q86X51 503 aaPredicted RBP3.09□□□□□ -1.91
SYNE1-207ENST00000367255 LOC105371242A0A075B767 164 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 SH2D7A6NKC9 451 aaPredicted RBP3.09□□□□□ -1.91
SYNE1-207ENST00000367255 RNASE1P07998 156 aaKnown RBP3.09□□□□□ -1.91
SYNE1-207ENST00000367255 TRPM3Q9HCF6 1732 aaPredicted RBP3.09□□□□□ -1.91
SYNE1-207ENST00000367255 MAST2Q6P0Q8 1798 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 TRAV4A0A0B4J268 109 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 TGFAP01135 160 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 Q9H3A6 140 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 ALPK2Q86TB3 2170 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF831Q5JPB2 1677 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 IGHV1OR21-1A0A087WYE8 117 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 HTN1P15515 57 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 SCN1AP35498 2009 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 PLCH1Q4KWH8 1693 aa3.09□□□□□ -1.91
SYNE1-207ENST00000367255 A0A1W2PPV9 198 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 C20orf141Q9NUB4 165 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 EPDR1Q9UM22 224 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 SNRNP200O75643 2136 aaKnown RBP3.09□□□□□ -1.92
SYNE1-207ENST00000367255 PRR32B1ATL7 298 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 EDDM3BP56851 147 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 EFNB3Q15768 340 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 INTS1Q8N201 2190 aaKnown RBP3.09□□□□□ -1.92
SYNE1-207ENST00000367255 H3BVH4 76 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 HEATR1Q9H583 2144 aaKnown RBP3.09□□□□□ -1.92
SYNE1-207ENST00000367255 ZNF497Q6ZNH5 498 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 PSG7Q13046 419 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 FAM104BQ5XKR9 115 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 TMEM230Q96A57 120 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 ZGLP1P0C6A0 271 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 IDI2-AS1Q9NZ38 188 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 TRAV26-2A0A0B4J265 109 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 MST1P26927 711 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 CTRLP40313 264 aa3.09□□□□□ -1.92
SYNE1-207ENST00000367255 CHD3Q12873 2000 aaKnown RBP3.09□□□□□ -1.92
SYNE1-207ENST00000367255 SCN9AQ15858 1988 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 HRKO00198 91 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 TCRBV4S1A1TA0A5B7 111 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 BAZ2AQ9UIF9 1905 aaKnown RBP3.08□□□□□ -1.92
SYNE1-207ENST00000367255 DDX60LQ5H9U9 1706 aaKnown RBP3.08□□□□□ -1.92
SYNE1-207ENST00000367255 IGHV3-43A0A0B4J1X8 118 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 IGHV3-43DP0DP04 118 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 HOXD3P31249 432 aaPredicted RBP3.08□□□□□ -1.92
SYNE1-207ENST00000367255 TMEM196Q5HYL7 178 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 MP68P56378 58 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 TIMM21Q9BVV7 248 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 KAAG1Q9UBP8 84 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 G3V4G9 280 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 AGFG2O95081 481 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 UBE2AP49459 152 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 GAS1P54826 345 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 RPL15P61313 204 aaKnown RBP3.08□□□□□ -1.92
SYNE1-207ENST00000367255 TRBV10-1A0A0K0K1A3 114 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 ZIC4Q8N9L1 334 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 RNF186Q9NXI6 227 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 CCL24O00175 119 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 PCOLCEQ15113 449 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 FAM19A2Q8N3H0 131 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 Q8N8P6 123 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 VOPP1Q96AW1 172 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 SCRG1O75711 98 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 WNT5AP41221 380 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 S4R3C0 116 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 NPPCP23582 126 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 RNF144BQ7Z419 303 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 ZDHHC16Q969W1 377 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 LOC101059948A0A1B0GTJ6 334 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 TP53BP1Q12888 1972 aaPredicted RBP3.08□□□□□ -1.92
SYNE1-207ENST00000367255 COL16A1Q07092 1604 aaPredicted RBP3.08□□□□□ -1.92
SYNE1-207ENST00000367255 IGKV3-7A0A075B6H7 116 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 TDRD6O60522 2096 aaKnown RBP3.08□□□□□ -1.92
SYNE1-207ENST00000367255 TPRX1Q8N7U7 411 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 TMEM74BQ9NUR3 256 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 RIF1Q5UIP0 2472 aaKnown RBP3.08□□□□□ -1.92
SYNE1-207ENST00000367255 ZNF462Q96JM2 2506 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms