RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 FCGR2CP31995 323 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 CCL18P55774 89 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 NUTF2P61970 127 aaKnown RBP5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 MSMO1Q15800 293 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 USF2Q15853 346 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 HACD4Q5VWC8 232 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 C16orf54Q6UWD8 224 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 TEX261Q6UWH6 196 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 ZNF114Q8NC26 417 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 RNASE11Q8TAA1 199 aaKnown RBP5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 FCAMRQ8WWV6 532 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 MOB3AQ96BX8 217 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 YIPF6Q96EC8 236 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 TMEM231Q9H6L2 316 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 U3KQ87 197 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 V9GY05 133 aa5.83□□□□□ -1.48
HMGB1P39-201ENST00000366304 DNAH8Q96JB1 4490 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 PPYP01298 95 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 IGKV1-17P01599 117 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 PSMB9P28065 219 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 LPAR6P43657 344 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 SPCS3P61009 180 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 FABP5Q01469 135 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 BTN1A1Q13410 526 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 ASAH1Q13510 395 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 ESRGQ1W209 222 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 SPINK9Q5DT21 86 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 TMEM69Q5SWH9 247 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 MZT2BQ6NZ67 158 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 COMMD7Q86VX2 200 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 METTL26Q96S19 204 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 SEC22CQ9BRL7 303 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 SLC5A7Q9GZV3 580 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 SAV1Q9H4B6 383 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 FNDC4Q9H6D8 234 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 NDUFB11Q9NX14 153 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 COMMD9Q9P000 198 aa5.82□□□□□ -1.48
HMGB1P39-201ENST00000366304 A0A1W2PS18 150 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 ZNF705GA8MUZ8 300 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 F6UB75 175 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 ARL6IP5O75915 188 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 HBE1P02100 147 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 FCER2P06734 321 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 MYL9P24844 172 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 GNRHRP30968 328 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 AKR1D1P51857 326 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 FXYD4P59646 89 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 COTL1Q14019 142 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 TIGITQ495A1 244 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 Q5BKY6 102 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 TTC32Q5I0X7 151 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 AADACL3Q5VUY0 350 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 CCDC190Q86UF4 302 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 ATG5Q9H1Y0 275 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 FAM30AQ9NZY2 134 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 COPZ2Q9P299 210 aa5.81□□□□□ -1.48
HMGB1P39-201ENST00000366304 A0A087WTM6 91 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 A0A1W2PPQ1 181 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 IFITM5A6NNB3 132 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 IGKV1-39P01597 117 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 IGKV1D-39P04432 117 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 RLN1P04808 185 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 ELK1P19419 428 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 AZU1P20160 251 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 NKX2-1P43699 371 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 NPBWR1P48145 328 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 FGL1Q08830 312 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 CATR1Q13166 79 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 ZNF79Q15937 498 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 IZUMO4Q1ZYL8 232 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 RRN3P1Q2M238 152 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 DNLZQ5SXM8 178 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 ZBTB34Q8NCN2 500 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 TMEM56Q96MV1 263 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 UPK3BQ9BT76 320 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 CDIP1Q9H305 208 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 NRN1Q9NPD7 142 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 GSN-AS1Q9NRJ2 163 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 PRNDQ9UKY0 176 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 HSPB11Q9Y547 144 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 LRP2P98164 4655 aa5.8□□□□□ -1.48
HMGB1P39-201ENST00000366304 TRDV1A0A1B0GX56 115 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 SMIM30A4D0T7 59 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 LINC00587B1AMM8 73 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 M0QYG6 137 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 PGLYRP1O75594 196 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 CLEC2LP0C7M8 214 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 F2RP25116 425 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 ERVK-16P61578 105 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 SNRPD3P62318 126 aaKnown RBP5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 PRCDQ00LT1 54 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 CLINT1Q14677 625 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 C22orf42Q6IC83 251 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 AMTNQ6UX39 209 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 TMEM17Q86X19 198 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 OR4B1Q8NGF8 309 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 LGALS14Q8TCE9 139 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 CLUHP3Q96NS8 147 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 GOLT1BQ9Y3E0 138 aa5.79□□□□□ -1.48
HMGB1P39-201ENST00000366304 CHTOPQ9Y3Y2 248 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms