RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SPINK6Q6UWN8 80 aa-0.35□□□□□ -2.47
RNU4-28P-201ENST00000364739 Q6ZS92 163 aa-0.35□□□□□ -2.47
RNU4-28P-201ENST00000364739 GPER1Q99527 375 aa-0.35□□□□□ -2.47
RNU4-28P-201ENST00000364739 PRADC1Q9BSG0 188 aa-0.35□□□□□ -2.47
RNU4-28P-201ENST00000364739 GUCA1BQ9UMX6 200 aa-0.35□□□□□ -2.47
RNU4-28P-201ENST00000364739 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.36□□□□□ -2.47
RNU4-28P-201ENST00000364739 SERPINE1P05121 402 aa-0.36□□□□□ -2.47
RNU4-28P-201ENST00000364739 SMIM17P0DL12 118 aa-0.36□□□□□ -2.47
RNU4-28P-201ENST00000364739 KRTAP20-2Q3LI61 65 aa-0.36□□□□□ -2.47
RNU4-28P-201ENST00000364739 CDKL4Q5MAI5 379 aa-0.36□□□□□ -2.47
RNU4-28P-201ENST00000364739 ZNF833PQ6ZTB9 187 aa-0.36□□□□□ -2.47
RNU4-28P-201ENST00000364739 TP53RKQ96S44 253 aa-0.36□□□□□ -2.47
RNU4-28P-201ENST00000364739 MED29Q9NX70 200 aa-0.36□□□□□ -2.47
RNU4-28P-201ENST00000364739 PCTPQ9UKL6 214 aa-0.36□□□□□ -2.47
RNU4-28P-201ENST00000364739 HERC1Q15751 4861 aa-0.36□□□□□ -2.47
RNU4-28P-201ENST00000364739 RNF213Q63HN8 5207 aa-0.36□□□□□ -2.47
RNU4-28P-201ENST00000364739 TNXBP22105 4242 aa-0.37□□□□□ -2.47
RNU4-28P-201ENST00000364739 F8W1H4 67 aa-0.37□□□□□ -2.47
RNU4-28P-201ENST00000364739 H3BRM9 83 aa-0.37□□□□□ -2.47
RNU4-28P-201ENST00000364739 KRTAP19-7Q3SYF9 63 aa-0.37□□□□□ -2.47
RNU4-28P-201ENST00000364739 C2orf82Q6UX34 121 aa-0.37□□□□□ -2.47
RNU4-28P-201ENST00000364739 DCUN1D1Q96GG9 259 aa-0.37□□□□□ -2.47
RNU4-28P-201ENST00000364739 C8orf76Q96K31 380 aa-0.37□□□□□ -2.47
RNU4-28P-201ENST00000364739 WFDC10AQ9H1F0 79 aa-0.37□□□□□ -2.47
RNU4-28P-201ENST00000364739 TMEM138Q9NPI0 162 aa-0.37□□□□□ -2.47
RNU4-28P-201ENST00000364739 NKIRAS1Q9NYS0 192 aa-0.37□□□□□ -2.47
RNU4-28P-201ENST00000364739 FBXO5Q9UKT4 447 aa-0.37□□□□□ -2.47
RNU4-28P-201ENST00000364739 ARHGEF11O15085 1522 aa-0.38□□□□□ -2.47
RNU4-28P-201ENST00000364739 C5orf67F2Z3F1 127 aa-0.38□□□□□ -2.47
RNU4-28P-201ENST00000364739 CYB5BO43169 146 aa-0.38□□□□□ -2.47
RNU4-28P-201ENST00000364739 TPM3P06753 285 aa-0.38□□□□□ -2.47
RNU4-28P-201ENST00000364739 SULT1A1P50225 295 aa-0.38□□□□□ -2.47
RNU4-28P-201ENST00000364739 TMED1Q13445 227 aa-0.38□□□□□ -2.47
RNU4-28P-201ENST00000364739 GLIPR1L1Q6UWM5 242 aa-0.38□□□□□ -2.47
RNU4-28P-201ENST00000364739 C12orf45Q8N5I9 185 aaPredicted RBP-0.38□□□□□ -2.47
RNU4-28P-201ENST00000364739 GDPD1Q8N9F7 314 aa-0.38□□□□□ -2.47
RNU4-28P-201ENST00000364739 SRRM2Q9UQ35 2752 aaKnown RBP-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 MYO5AQ9Y4I1 1855 aaKnown RBP-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 TRAV10A0A0B4J240 114 aa-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 CNIH1O95406 144 aa-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 IFNA5P01569 189 aa-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 TTRP02766 147 aa-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 SRIP30626 198 aa-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 RNASE4P34096 147 aaKnown RBP-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 Q8TAT8 98 aa-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 JPT1Q9UK76 154 aa-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 KDM6AO15550 1401 aaPredicted RBP-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 CREBBPQ92793 2442 aa-0.39□□□□□ -2.47
RNU4-28P-201ENST00000364739 KMT2AQ03164 3969 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 MAP3K5Q99683 1374 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 B4DSR2 109 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 MT4P47944 62 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 C4orf22Q6V702 233 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 TEN1Q86WV5 123 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 OR5D14Q8NGL3 314 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 SLC25A40Q8TBP6 338 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 ZC2HC1AQ96GY0 325 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 MGAMO43451 1857 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 RYR2Q92736 4967 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 ABCA4P78363 2273 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 STARD9Q9P2P6 4700 aa-0.4□□□□□ -2.47
RNU4-28P-201ENST00000364739 KIF1BO60333 1816 aa-0.41□□□□□ -2.47
RNU4-28P-201ENST00000364739 FAT1Q14517 4588 aa-0.41□□□□□ -2.47
RNU4-28P-201ENST00000364739 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.41□□□□□ -2.47
RNU4-28P-201ENST00000364739 hCG_1818297A0A087WSY0 165 aa-0.41□□□□□ -2.48
RNU4-28P-201ENST00000364739 TRBV30A0A0K0K1B3 111 aa-0.41□□□□□ -2.48
RNU4-28P-201ENST00000364739 A8MT66 165 aa-0.41□□□□□ -2.48
RNU4-28P-201ENST00000364739 PPYP01298 95 aa-0.41□□□□□ -2.48
RNU4-28P-201ENST00000364739 NKX2-5P52952 324 aaPredicted RBP-0.41□□□□□ -2.48
RNU4-28P-201ENST00000364739 ROMO1P60602 79 aa-0.41□□□□□ -2.48
RNU4-28P-201ENST00000364739 TPM4P67936 248 aa-0.41□□□□□ -2.48
RNU4-28P-201ENST00000364739 ATOH7Q8N100 152 aa-0.41□□□□□ -2.48
RNU4-28P-201ENST00000364739 OR10AC1Q8NH08 325 aa-0.41□□□□□ -2.48
RNU4-28P-201ENST00000364739 MYLKQ15746 1914 aa-0.41□□□□□ -2.48
RNU4-28P-201ENST00000364739 OTOGQ6ZRI0 2925 aa-0.42□□□□□ -2.48
RNU4-28P-201ENST00000364739 TRAV23DV6A0A075B6W5 121 aa-0.42□□□□□ -2.48
RNU4-28P-201ENST00000364739 IFNA16P05015 189 aa-0.42□□□□□ -2.48
RNU4-28P-201ENST00000364739 FAM172AQ8WUF8 416 aa-0.42□□□□□ -2.48
RNU4-28P-201ENST00000364739 TMEM133Q9H2Q1 129 aa-0.42□□□□□ -2.48
RNU4-28P-201ENST00000364739 VPS29Q9UBQ0 182 aa-0.42□□□□□ -2.48
RNU4-28P-201ENST00000364739 TEP1Q99973 2627 aaKnown RBP-0.42□□□□□ -2.48
RNU4-28P-201ENST00000364739 PIEZO1Q92508 2521 aa-0.42□□□□□ -2.48
RNU4-28P-201ENST00000364739 LRP2P98164 4655 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 BCL9O00512 1426 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 HMCN2Q8NDA2 5059 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 hADV38S2A0JD32 116 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 CLDN24A6NM45 220 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 EIF5AP63241 154 aaKnown RBP-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 KRTAP19-8Q3LI54 63 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 CCDC122Q5T0U0 273 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 PDZD9Q8IXQ8 264 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 CLDN22Q8N7P3 220 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 STAG3L4Q8TBR4 150 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 CT55Q8WUE5 264 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 C2orf50Q96LR7 162 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 GGACTQ9BVM4 153 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 RNASE7Q9H1E1 156 aaKnown RBP-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 FLNCQ14315 2725 aa-0.43□□□□□ -2.48
RNU4-28P-201ENST00000364739 PTPRDP23468 1912 aa-0.44□□□□□ -2.48
RNU4-28P-201ENST00000364739 JMJD7-PLA2G4BH0Y9G9 81 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms