RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 C5orf64Q2M2E5 130 aa17.2■□□□□ 0.34
SMURF1-201ENST00000361125 OVOL1O14753 267 aa17.2■□□□□ 0.34
SMURF1-201ENST00000361125 FOXL1Q12952 345 aa17.2■□□□□ 0.34
SMURF1-201ENST00000361125 TTC9CQ8N5M4 171 aa17.2■□□□□ 0.34
SMURF1-201ENST00000361125 IGFL4Q6B9Z1 124 aa17.2■□□□□ 0.34
SMURF1-201ENST00000361125 ASCL4Q6XD76 172 aa17.2■□□□□ 0.34
SMURF1-201ENST00000361125 SPTA1P02549 2419 aa17.2■□□□□ 0.34
SMURF1-201ENST00000361125 NTF4P34130 210 aa17.2■□□□□ 0.34
SMURF1-201ENST00000361125 CACNG7P62955 275 aa17.2■□□□□ 0.34
SMURF1-201ENST00000361125 Q6ZS49 121 aa17.2■□□□□ 0.34
SMURF1-201ENST00000361125 GTSCR1Q86UQ5 136 aa17.2■□□□□ 0.34
SMURF1-201ENST00000361125 DEFB104AQ8WTQ1 72 aa17.19■□□□□ 0.34
SMURF1-201ENST00000361125 TSKUQ8WUA8 353 aa17.19■□□□□ 0.34
SMURF1-201ENST00000361125 PROK2Q9HC23 129 aa17.19■□□□□ 0.34
SMURF1-201ENST00000361125 ZNF524Q96C55 264 aa17.19■□□□□ 0.34
SMURF1-201ENST00000361125 ANAPC10Q9UM13 185 aa17.19■□□□□ 0.34
SMURF1-201ENST00000361125 SNRNP200O75643 2136 aaKnown RBP17.19■□□□□ 0.34
SMURF1-201ENST00000361125 K7ENP7 123 aa17.18■□□□□ 0.34
SMURF1-201ENST00000361125 ZNF329Q86UD4 541 aa17.18■□□□□ 0.34
SMURF1-201ENST00000361125 SIGLEC9Q9Y336 463 aa17.18■□□□□ 0.34
SMURF1-201ENST00000361125 PLXNA2O75051 1894 aa17.18■□□□□ 0.34
SMURF1-201ENST00000361125 SPSB3Q6PJ21 355 aa17.18■□□□□ 0.34
SMURF1-201ENST00000361125 TRGV4A0A0C4DH28 118 aa17.18■□□□□ 0.34
SMURF1-201ENST00000361125 DNAL4O96015 105 aa17.18■□□□□ 0.34
SMURF1-201ENST00000361125 FXYD7P58549 80 aa17.18■□□□□ 0.34
SMURF1-201ENST00000361125 SRSF1Q07955 248 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMURF1-201ENST00000361125 LINC00614P0C842 121 aa17.18■□□□□ 0.34
SMURF1-201ENST00000361125 TRGV9Q99603 122 aa17.18■□□□□ 0.34
SMURF1-201ENST00000361125 VCX2Q9H322 139 aa17.18■□□□□ 0.34
SMURF1-201ENST00000361125 TRGV11A0A075B6L2 103 aa17.17■□□□□ 0.34
SMURF1-201ENST00000361125 MLANAQ16655 118 aa17.17■□□□□ 0.34
SMURF1-201ENST00000361125 APOMO95445 188 aa17.17■□□□□ 0.34
SMURF1-201ENST00000361125 IGKV1-16P04430 117 aa17.17■□□□□ 0.34
SMURF1-201ENST00000361125 IFI27P40305 119 aaPredicted RBP17.17■□□□□ 0.34
SMURF1-201ENST00000361125 RNF5Q99942 180 aa17.17■□□□□ 0.34
SMURF1-201ENST00000361125 TRAV9-2A0A087WT02 112 aa17.17■□□□□ 0.34
SMURF1-201ENST00000361125 IGHV3-73A0A0B4J1V6 119 aa17.17■□□□□ 0.34
SMURF1-201ENST00000361125 RUSC1-AS1Q66K80 236 aa17.17■□□□□ 0.34
SMURF1-201ENST00000361125 FAM90A2PQ658T7 463 aa17.16■□□□□ 0.34
SMURF1-201ENST00000361125 CFAP161Q6P656 301 aa17.16■□□□□ 0.34
SMURF1-201ENST00000361125 Q6ZRM9 215 aa17.16■□□□□ 0.34
SMURF1-201ENST00000361125 OOSP1A8MZH6 123 aa17.16■□□□□ 0.34
SMURF1-201ENST00000361125 NIT1Q86X76 327 aa17.16■□□□□ 0.34
SMURF1-201ENST00000361125 C1orf147Q96MC9 270 aaPredicted RBP17.16■□□□□ 0.34
SMURF1-201ENST00000361125 MALP21145 153 aa17.16■□□□□ 0.34
SMURF1-201ENST00000361125 VOPP1Q96AW1 172 aa17.16■□□□□ 0.34
SMURF1-201ENST00000361125 ICE1Q9Y2F5 2266 aa17.15■□□□□ 0.34
SMURF1-201ENST00000361125 HBDP02042 147 aa17.15■□□□□ 0.34
SMURF1-201ENST00000361125 CNTFRP26992 372 aa17.15■□□□□ 0.34
SMURF1-201ENST00000361125 FAM169BQ8N8A8 192 aa17.15■□□□□ 0.34
SMURF1-201ENST00000361125 A6NNC1 897 aa17.15■□□□□ 0.34
SMURF1-201ENST00000361125 TNFSF13O75888 250 aa17.15■□□□□ 0.34
SMURF1-201ENST00000361125 SAA4P35542 130 aa17.15■□□□□ 0.34
SMURF1-201ENST00000361125 TMEM256Q8N2U0 113 aa17.15■□□□□ 0.34
SMURF1-201ENST00000361125 TRBV7-1A0A0A6YYK4 115 aa17.14■□□□□ 0.34
SMURF1-201ENST00000361125 Q8TAT8 98 aa17.14■□□□□ 0.33
SMURF1-201ENST00000361125 C15orf62A8K5M9 175 aa17.14■□□□□ 0.33
SMURF1-201ENST00000361125 MPDZO75970 2070 aa17.14■□□□□ 0.33
SMURF1-201ENST00000361125 ZNF688P0C7X2 276 aa17.14■□□□□ 0.33
SMURF1-201ENST00000361125 MED12Q93074 2177 aa17.14■□□□□ 0.33
SMURF1-201ENST00000361125 NCR2O95944 276 aa17.14■□□□□ 0.33
SMURF1-201ENST00000361125 ERVK11-1P61568 191 aa17.14■□□□□ 0.33
SMURF1-201ENST00000361125 MAPK1IP1LQ8NDC0 245 aa17.14■□□□□ 0.33
SMURF1-201ENST00000361125 F2Z2F3 143 aa17.12■□□□□ 0.33
SMURF1-201ENST00000361125 TCRAP04437 139 aa17.12■□□□□ 0.33
SMURF1-201ENST00000361125 C1orf194Q5T5A4 169 aa17.12■□□□□ 0.33
SMURF1-201ENST00000361125 PIP4P2Q8N4L2 257 aa17.12■□□□□ 0.33
SMURF1-201ENST00000361125 LINC01356Q8N9X3 169 aa17.12■□□□□ 0.33
SMURF1-201ENST00000361125 ZNF503-AS2A6NEH8 195 aa17.12■□□□□ 0.33
SMURF1-201ENST00000361125 CD28P10747 220 aa17.12■□□□□ 0.33
SMURF1-201ENST00000361125 TRAV12-3A0A0B4J271 114 aa17.12■□□□□ 0.33
SMURF1-201ENST00000361125 FCN3O75636 299 aa17.12■□□□□ 0.33
SMURF1-201ENST00000361125 SP5Q6BEB4 398 aaPredicted RBP17.12■□□□□ 0.33
SMURF1-201ENST00000361125 CHTOPQ9Y3Y2 248 aaKnown RBP17.12■□□□□ 0.33
SMURF1-201ENST00000361125 CYSLTR1Q9Y271 337 aa17.12■□□□□ 0.33
SMURF1-201ENST00000361125 IGKV1-6A0A0C4DH72 117 aa17.11■□□□□ 0.33
SMURF1-201ENST00000361125 RPL35AP18077 110 aaKnown RBP17.11■□□□□ 0.33
SMURF1-201ENST00000361125 IGHV3-64A0A075B6Q5 118 aa17.11■□□□□ 0.33
SMURF1-201ENST00000361125 C10orf91Q5T1B1 145 aa17.11■□□□□ 0.33
SMURF1-201ENST00000361125 LYZL1Q6UWQ5 148 aa17.11■□□□□ 0.33
SMURF1-201ENST00000361125 RNF223E7ERA6 249 aa17.11■□□□□ 0.33
SMURF1-201ENST00000361125 RNASE2P10153 161 aaKnown RBP17.11■□□□□ 0.33
SMURF1-201ENST00000361125 PLA2G2CQ5R387 149 aa17.11■□□□□ 0.33
SMURF1-201ENST00000361125 DUX4L9Q6RFH8 374 aaPredicted RBP17.11■□□□□ 0.33
SMURF1-201ENST00000361125 NXT2Q9NPJ8 142 aaKnown RBP17.11■□□□□ 0.33
SMURF1-201ENST00000361125 SH2D1AO60880 128 aa17.1■□□□□ 0.33
SMURF1-201ENST00000361125 LCNL1Q6ZST4 164 aa17.1■□□□□ 0.33
SMURF1-201ENST00000361125 RCHY1Q96PM5 261 aa17.1■□□□□ 0.33
SMURF1-201ENST00000361125 ETV2O00321 342 aaPredicted RBP17.1■□□□□ 0.33
SMURF1-201ENST00000361125 NDUFS6O75380 124 aaKnown RBP17.1■□□□□ 0.33
SMURF1-201ENST00000361125 ATP5L2Q7Z4Y8 100 aa17.1■□□□□ 0.33
SMURF1-201ENST00000361125 ZNF415Q09FC8 603 aa17.1■□□□□ 0.33
SMURF1-201ENST00000361125 TMEM155Q4W5P6 130 aa17.1■□□□□ 0.33
SMURF1-201ENST00000361125 KLHL30-AS1Q8NEE0 82 aa17.1■□□□□ 0.33
SMURF1-201ENST00000361125 DPM2O94777 84 aa17.09■□□□□ 0.33
SMURF1-201ENST00000361125 TYMSP04818 313 aa17.09■□□□□ 0.33
SMURF1-201ENST00000361125 CHCHD1Q96BP2 118 aaKnown RBP17.09■□□□□ 0.33
SMURF1-201ENST00000361125 TRBV7-9A0A0J9YWB2 115 aa17.09■□□□□ 0.33
SMURF1-201ENST00000361125 Q6ZR03 302 aa17.09■□□□□ 0.33
SMURF1-201ENST00000361125 ZNF124Q15973 351 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms