RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 MAPK1IP1LQ8NDC0 245 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 GATAD1Q8WUU5 269 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 RPEQ96AT9 228 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 C1orf159Q96HA4 380 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 FBXL15Q9H469 300 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 SRD5A3Q9H8P0 318 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 FOXA2Q9Y261 457 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 WASHC3Q9Y3C0 194 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 MYO9AB2RTY4 2548 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 PRRC2AP48634 2157 aaKnown RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 PIGBOS1A0A0B4J2F0 54 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 J3QR89 54 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 K7EQM0 130 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 GATA2P23769 480 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 NPY1RP25929 384 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 KRTAP10-9P60411 292 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 RPL8P62917 257 aaKnown RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 PAFAH1B2P68402 229 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 WT1-ASQ06250 92 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 MRGPRG-AS1Q2M3A8 158 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 FFAR4Q5NUL3 377 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 LINC00311Q8N616 119 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 STPG4Q8N801 248 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 LY6G5BQ8NDX9 201 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 OR4C13Q8NGP0 309 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 GNPNAT1Q96EK6 184 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 TBX15Q96SF7 602 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 CHRDL1Q9BU40 450 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 C20orf24Q9BUV8 137 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 TMEM147Q9BVK8 224 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 NPCDR1Q9BY65 106 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 GEMIN7Q9H840 131 aaKnown RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 PLEKHA3Q9HB20 300 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 ENY2Q9NPA8 101 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 SOX21Q9Y651 276 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 IGHV4-61A0A0C4DH41 118 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 A0A1W2PPI3 338 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 ZFP92A6NM28 416 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 ZNF705FA8MVS1 300 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-202ENST00000359366 F8WDY8 70 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 OVOL3O00110 214 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 SAP30O75446 220 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 SCGB2A1O75556 95 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 BRI3O95415 125 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 ZNF705DP0CH99 300 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-202ENST00000359366 ZNF705BP0CI00 300 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-202ENST00000359366 AREGP15514 252 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 AZU1P20160 251 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 ATP5J2P56134 94 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 PLP1P60201 277 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 LMO4P61968 165 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 PMS2P11Q13670 270 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 HES1Q14469 280 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 TNXAQ16473 311 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 TMEM177Q53S58 311 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 MIC13Q5XKP0 118 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 ZNF429Q86V71 674 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 BOD1L2Q8IYS8 172 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 RPP25LQ8N5L8 163 aaKnown RBP4.07□□□□□ -1.76
ATXN3-202ENST00000359366 FAM103A1Q9BTL3 118 aaKnown RBP4.07□□□□□ -1.76
ATXN3-202ENST00000359366 SCRT1Q9BWW7 348 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 COMMD5Q9GZQ3 224 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 CTDSP1Q9GZU7 261 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 GNG13Q9P2W3 67 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 CUBNO60494 3623 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 MTORP42345 2549 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 IGHV4-30-2A0A087WSY4 118 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 SH2D7A6NKC9 451 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-202ENST00000359366 PRSS46E5RG02 174 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 LY6LH3BQJ8 138 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 CLDN34H7C241 214 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 CXCL1P09341 107 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 HOXB4P17483 251 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-202ENST00000359366 HNRNPA3P51991 378 aaKnown RBP4.07□□□□□ -1.76
ATXN3-202ENST00000359366 PRCDQ00LT1 54 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 POU2AF1Q16633 256 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 TMEM30BQ3MIR4 351 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 TMEM41BQ5BJD5 291 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 GTF2H5Q6ZYL4 71 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 PDPNQ86YL7 162 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 FER1L6-AS1Q8NA97 138 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 OR2T6Q8NHC8 308 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 C8orf46Q8TAG6 207 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 OSR1Q8TAX0 266 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-202ENST00000359366 MGST2Q99735 147 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 MRPL36Q9P0J6 103 aaKnown RBP4.07□□□□□ -1.76
ATXN3-202ENST00000359366 PRNDQ9UKY0 176 aa4.07□□□□□ -1.76
ATXN3-202ENST00000359366 IGKV1OR2-108A0A075B7D4 117 aa4.06□□□□□ -1.76
ATXN3-202ENST00000359366 FAM90A9PA6NNJ1 464 aa4.06□□□□□ -1.76
ATXN3-202ENST00000359366 ACTL6BO94805 426 aa4.06□□□□□ -1.76
ATXN3-202ENST00000359366 IL3RAP26951 378 aa4.06□□□□□ -1.76
ATXN3-202ENST00000359366 HTR1DP28221 377 aa4.06□□□□□ -1.76
ATXN3-202ENST00000359366 ZNF137PP52743 207 aa4.06□□□□□ -1.76
ATXN3-202ENST00000359366 FAM3BP58499 235 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-202ENST00000359366 GAGE5Q13069 117 aa4.06□□□□□ -1.76
ATXN3-202ENST00000359366 GAGE6Q13070 117 aa4.06□□□□□ -1.76
ATXN3-202ENST00000359366 PLGLAQ15195 96 aa4.06□□□□□ -1.76
ATXN3-202ENST00000359366 MMDQ15546 238 aa4.06□□□□□ -1.76
ATXN3-202ENST00000359366 FAM120AOSQ5T036 256 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms