RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CLRN3Q8NCR9 226 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 OR5AU1Q8NGC0 362 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 OR4F5Q8NH21 305 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 RPUSD4Q96CM3 377 aaKnown RBP10.53□□□□□ -0.72
CCDC197-201ENST00000359253 RNF125Q96EQ8 232 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 OR4F4Q96R69 305 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 PAXXQ9BUH6 204 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 SLC25A2Q9BXI2 301 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 NPFFR1Q9GZQ6 430 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 TMEM14CQ9P0S9 112 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 PRELID1Q9Y255 219 aa10.53□□□□□ -0.72
CCDC197-201ENST00000359253 FAM74A7A6NL05 159 aa10.52□□□□□ -0.73
CCDC197-201ENST00000359253 CTSGP08311 255 aa10.52□□□□□ -0.73
CCDC197-201ENST00000359253 RAB9AP51151 201 aa10.52□□□□□ -0.73
CCDC197-201ENST00000359253 LYZP61626 148 aa10.52□□□□□ -0.73
CCDC197-201ENST00000359253 BLCAPP62952 87 aa10.52□□□□□ -0.73
CCDC197-201ENST00000359253 RELQ04864 619 aaPredicted RBP10.52□□□□□ -0.73
CCDC197-201ENST00000359253 KRTAP21-3Q3LHN1 58 aa10.52□□□□□ -0.73
CCDC197-201ENST00000359253 FAM90A2PQ658T7 463 aa10.52□□□□□ -0.73
CCDC197-201ENST00000359253 TVP23CQ96ET8 276 aa10.52□□□□□ -0.73
CCDC197-201ENST00000359253 SLC25A39Q9BZJ4 359 aaPredicted RBP10.52□□□□□ -0.73
CCDC197-201ENST00000359253 DOK5Q9P104 306 aa10.52□□□□□ -0.73
CCDC197-201ENST00000359253 ZFHX3Q15911 3703 aa10.51□□□□□ -0.73
CCDC197-201ENST00000359253 SH2D7A6NKC9 451 aaPredicted RBP10.51□□□□□ -0.73
CCDC197-201ENST00000359253 EIF3GO75821 320 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCDC197-201ENST00000359253 IGLV1-40P01703 118 aa10.51□□□□□ -0.73
CCDC197-201ENST00000359253 TRGV3P03979 118 aa10.51□□□□□ -0.73
CCDC197-201ENST00000359253 ZNF503Q96F45 646 aa10.51□□□□□ -0.73
CCDC197-201ENST00000359253 SHANK2-AS3Q9BTD1 123 aa10.51□□□□□ -0.73
CCDC197-201ENST00000359253 NAT8Q9UHE5 227 aa10.51□□□□□ -0.73
CCDC197-201ENST00000359253 ANK3Q12955 4377 aaKnown RBP10.51□□□□□ -0.73
CCDC197-201ENST00000359253 SVEP1Q4LDE5 3571 aa10.51□□□□□ -0.73
CCDC197-201ENST00000359253 ZNF727A8MUV8 499 aa10.5□□□□□ -0.73
CCDC197-201ENST00000359253 H3BQ15 152 aa10.5□□□□□ -0.73
CCDC197-201ENST00000359253 BMPR1BO00238 502 aa10.5□□□□□ -0.73
CCDC197-201ENST00000359253 IL4P05112 153 aa10.5□□□□□ -0.73
CCDC197-201ENST00000359253 CLEC3BP05452 202 aa10.5□□□□□ -0.73
CCDC197-201ENST00000359253 UBE2L3P68036 154 aaKnown RBP10.5□□□□□ -0.73
CCDC197-201ENST00000359253 SLC35B1P78383 322 aa10.5□□□□□ -0.73
CCDC197-201ENST00000359253 CFHR3Q02985 330 aa10.5□□□□□ -0.73
CCDC197-201ENST00000359253 BPIFA4PQ86YQ2 179 aa10.5□□□□□ -0.73
CCDC197-201ENST00000359253 C11orf52Q96A22 123 aa10.5□□□□□ -0.73
CCDC197-201ENST00000359253 OR2T8A6NH00 312 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 H3BRN7 92 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 M0R036 132 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 HOXA3O43365 443 aaPredicted RBP10.49□□□□□ -0.73
CCDC197-201ENST00000359253 TGOLN2O43493 480 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 IGHG4P01861 327 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 HIST1H1EP10412 219 aaKnown RBP10.49□□□□□ -0.73
CCDC197-201ENST00000359253 CEBPGP53567 150 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 UBE2G2P60604 165 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 TMEM241Q24JQ0 296 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 IL17RELQ6ZVW7 336 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 ZNF418Q8TF45 676 aaPredicted RBP10.49□□□□□ -0.73
CCDC197-201ENST00000359253 FXYD5Q96DB9 178 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 MS4A10Q96PG2 267 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 JMJD8Q96S16 334 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 SMIM7Q9BQ49 75 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 TUBA4BQ9H853 241 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 SDF2L1Q9HCN8 221 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 RABAC1Q9UI14 185 aa10.49□□□□□ -0.73
CCDC197-201ENST00000359253 PUS1Q9Y606 427 aaKnown RBP eCLIP10.49□□□□□ -0.73
CCDC197-201ENST00000359253 A0A087WWC5 75 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 TRAV5A0A0B4J249 113 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 NBEAP1P0C6P0 100 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 GPR183P32249 361 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 ATP5G3P48201 142 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 TPPP2P59282 170 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 RPL15P61313 204 aaKnown RBP10.48□□□□□ -0.73
CCDC197-201ENST00000359253 MORN5Q5VZ52 161 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 ZNF343Q6P1L6 599 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 ATRAIDQ6UW56 229 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 Q8N2B8 174 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 LYPD1Q8N2G4 141 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 PARLQ9H300 379 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 YTHDF2Q9Y5A9 579 aaKnown RBP10.48□□□□□ -0.73
CCDC197-201ENST00000359253 LY96Q9Y6Y9 160 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 MXRA5Q9NR99 2828 aa10.48□□□□□ -0.73
CCDC197-201ENST00000359253 NF1P21359 2839 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.47□□□□□ -0.73
CCDC197-201ENST00000359253 C7orf77A4D0Y5 90 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 ZNF98A6NK75 572 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 ELANEP08246 267 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 GP9P14770 177 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 ADMP35318 185 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 BTN1A1Q13410 526 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 AWAT1Q58HT5 328 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 CLEC19AQ6UXS0 136 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 SIGLECL1Q8N7X8 197 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 OR4F17Q8NGA8 305 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 CCDC140Q96MF4 163 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 GPR82Q96P67 336 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 CHRDL1Q9BU40 450 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 SMCO4Q9NRQ5 59 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 TMEM242Q9NWH2 141 aa10.47□□□□□ -0.73
CCDC197-201ENST00000359253 CXorf65A6NEN9 183 aa10.46□□□□□ -0.73
CCDC197-201ENST00000359253 C9JCJ5 164 aa10.46□□□□□ -0.73
CCDC197-201ENST00000359253 CLDN34H7C241 214 aa10.46□□□□□ -0.73
CCDC197-201ENST00000359253 TCF21O43680 179 aa10.46□□□□□ -0.73
CCDC197-201ENST00000359253 SCO1O75880 301 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms