RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 MRPL36Q9P0J6 103 aaKnown RBP5.32□□□□□ -1.56
CSDE1-203ENST00000358528 GAGE10A6NGK3 116 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 NCBP2LA6PVI3 153 aaKnown RBP5.31□□□□□ -1.56
CSDE1-203ENST00000358528 H0YJW9 148 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 SYS1-DBNDD2H3BUS1 97 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 CNTFRP26992 372 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 LYPD2Q6UXB3 125 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 C12orf54Q6X4T0 127 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 RBPMS2Q6ZRY4 209 aaKnown RBP5.31□□□□□ -1.56
CSDE1-203ENST00000358528 SLC25A48Q6ZT89 311 aaKnown RBP5.31□□□□□ -1.56
CSDE1-203ENST00000358528 DDB2Q92466 427 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 M0R296 226 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 IGLV2-8P01709 118 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 LIPFP07098 398 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 RPL24P83731 157 aaKnown RBP5.31□□□□□ -1.56
CSDE1-203ENST00000358528 GDF5OSQ5U4N7 250 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 TMEM200BQ69YZ2 307 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 IGFBPL1Q8WX77 278 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 LINC00312Q9Y6C7 94 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 A0A1W2PPI3 338 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 CDX4O14627 284 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-203ENST00000358528 PATE2Q6UY27 113 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 ORAOV1Q8WV07 137 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 AAMDCQ9H7C9 122 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 MRPL27Q9P0M9 148 aaKnown RBP5.31□□□□□ -1.56
CSDE1-203ENST00000358528 BOD1L1Q8NFC6 3051 aa5.31□□□□□ -1.56
CSDE1-203ENST00000358528 GNG7O60262 68 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 NDUFB8O95169 186 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 ORM1P02763 201 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 IL4P05112 153 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 PRSS1P07477 247 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 FTH1P19P0C7X4 201 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 KLF17Q5JT82 389 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-203ENST00000358528 TEX45Q8NA69 505 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 IGHV3OR16-13A0A075B7E8 117 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 IGHV3-74A0A0B4J1X5 117 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 IGHV1-24A0A0C4DH33 117 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 A0A1B0GUT8 65 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 C16orf97H3BN30 126 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 J3KRW8 73 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 M0R3E3 92 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 WT1P19544 449 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-203ENST00000358528 RELQ04864 619 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-203ENST00000358528 C1orf185Q5T7R7 199 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 ZNF788Q6ZQV5 615 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 FAM167A-AS1Q96KT0 104 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 NDUFA4L2Q9NRX3 87 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 THYN1Q9P016 225 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 IGHV1-69-2A0A0G2JMI3 117 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 TCRAP04437 139 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 ARMS2P0C7Q2 107 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 ESDP10768 282 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 BSPH1Q075Z2 132 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 TWIST1Q15672 202 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 GFRALQ6UXV0 394 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 TMEM186Q96B77 213 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 FXYD5Q96DB9 178 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 RITA1Q96K30 269 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 IGF2BP2-AS1Q96M15 143 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 SPRY4Q9C004 299 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 HIF1ANQ9NWT6 349 aa5.3□□□□□ -1.56
CSDE1-203ENST00000358528 CGB1A6NKQ9 187 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 TM4SF5O14894 197 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 GPR183P32249 361 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 RIPPLY3P57055 190 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 OR10AG1Q8NH19 301 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 RALYQ9UKM9 306 aaKnown RBP5.29□□□□□ -1.56
CSDE1-203ENST00000358528 MRPS16Q9Y3D3 137 aaKnown RBP5.29□□□□□ -1.56
CSDE1-203ENST00000358528 IGHV2-26A0A0B4J1V2 119 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 C17orf100A8MU93 164 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 H3BUT2 72 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 OR2J3O76001 311 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 IGLV1-44P01699 117 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 IGHG3P01860 377 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 MC5RP33032 325 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 SMIM15Q7Z3B0 74 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 MRPL52Q86TS9 123 aaKnown RBP5.29□□□□□ -1.56
CSDE1-203ENST00000358528 PPP1R14DQ9NXH3 145 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 CREBBPQ92793 2442 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 TMEM189A5PLL7 270 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 K7ERU9 68 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 NCR2O95944 276 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 ZNF883P0CG24 379 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 PPIFP30405 207 aaKnown RBP5.29□□□□□ -1.56
CSDE1-203ENST00000358528 CKS2P33552 79 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 IGFL4Q6B9Z1 124 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 LINC00322Q6ZN03 302 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-203ENST00000358528 FMC1Q96HJ9 113 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 SCNM1Q9BWG6 230 aa5.29□□□□□ -1.56
CSDE1-203ENST00000358528 C7orf71A4D174 169 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 SMKR1H3BMG3 65 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 CRYABP02511 175 aaKnown RBP5.28□□□□□ -1.56
CSDE1-203ENST00000358528 GCSHP23434 173 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 CFHR2P36980 270 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 CTRLP40313 264 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 ATP5IP56385 69 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-203ENST00000358528 CACNG7P62955 275 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 SCGB2A2Q13296 93 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 Q8N976 141 aa5.28□□□□□ -1.56
CSDE1-203ENST00000358528 TMEM167AQ8TBQ9 72 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms