RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SPRR3Q9UBC9 169 aa7.57□□□□□ -1.2
SMARCAL1-202ENST00000358207 TRBV20-1A0A075B6N2 111 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 TRAV25A0A0B4J276 109 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 E9PLD3 99 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 SMAD7O15105 426 aaKnown RBP7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 BCL3P20749 454 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 ZNF645Q8N7E2 425 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 KIR2DL4Q99706 377 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 CHEK1O14757 476 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 APOMO95445 188 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 IGLV3-1P01715 115 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 TRAT1Q6PIZ9 186 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 PCP2Q8IVA1 136 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 CNEP1R1Q8N9A8 125 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 PLPPR2Q96GM1 343 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 PIGLQ9Y2B2 252 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 POLDIP2Q9Y2S7 368 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 TIMM8BQ9Y5J9 83 aaPredicted RBP7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 FLNCQ14315 2725 aa7.56□□□□□ -1.2
SMARCAL1-202ENST00000358207 CXorf1O96002 111 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 CAMPP49913 170 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 GAGE13Q4V321 117 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 IBA57Q5T440 356 aaKnown RBP7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 ZFAND6Q6FIF0 208 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 TMEM211Q6ICI0 200 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 MDS2Q8NDY4 140 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 F11RQ9Y624 299 aaKnown RBP7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 TRGV5A0A0B4J1U4 118 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 A0A1B0GWB2 263 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 C3orf80F5H4A9 247 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 MRPL33O75394 65 aaKnown RBP7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 RTL8BQ17RB0 113 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 RPRMLQ8N4K4 120 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 TMEM178AQ8NBL3 297 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 NUP35Q8NFH5 326 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 ZNF502Q8TBZ5 544 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 SNRNP40Q96DI7 357 aaKnown RBP7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 ZNF442Q9H7R0 627 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 KLF13Q9Y2Y9 288 aaPredicted RBP7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 HIVEP3Q5T1R4 2406 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 CRYBG3Q68DQ2 2970 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 FOXH1O75593 365 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 PSG5Q15238 335 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 MOB1BQ7L9L4 216 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 OR4X2Q8NGF9 303 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 C8orf46Q8TAG6 207 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 PTH2Q96A98 100 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 TMEM133Q9H2Q1 129 aa7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 LSM4Q9Y4Z0 139 aaKnown RBP7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 UTP20O75691 2785 aaKnown RBP7.55□□□□□ -1.2
SMARCAL1-202ENST00000358207 TANC2Q9HCD6 1990 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 GCSHP23434 173 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 SMCPP49901 116 aaPredicted RBP7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 TAS2R45P59539 299 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 OR9G4Q8NGQ1 327 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 CHCHD1Q96BP2 118 aaKnown RBP7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 TRIB1Q96RU8 372 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 IL36RNQ9UBH0 155 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 DCHS2Q6V1P9 2916 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 IGLL5B9A064 214 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 DHRS3O75911 302 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 RBP4P02753 201 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 CT45A10P0DMU9 189 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 GCHFRP30047 84 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 OPRK1P41145 380 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 TEX29Q8N6K0 151 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 NHLRC2Q8NBF2 726 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 AJUBAQ96IF1 538 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 ADTRPQ96IZ2 230 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 PKIBQ9C010 78 aa7.54□□□□□ -1.2
SMARCAL1-202ENST00000358207 TRAV17A0A0B4J275 112 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 CT45A6P0DMU7 189 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 CT45A5P0DMU8 189 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 CT45A7P0DMV0 189 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 ZNF32P17041 273 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 CT45A1Q5HYN5 189 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 RASL11AQ6T310 242 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 BCL6BQ8N143 479 aaPredicted RBP7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 CT45A3Q8NHU0 189 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 DAZAP1Q96EP5 407 aaKnown RBP7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 VCX2Q9H322 139 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 ZNF503-AS2A6NEH8 195 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 NDUFV3P56181 108 aaKnown RBP7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 MALLQ13021 153 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 OSR2Q8N2R0 312 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 ZNF808Q8N4W9 903 aaPredicted RBP7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 NRGNQ92686 78 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 ZDHHC16Q969W1 377 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 HCFC1P51610 2035 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 ANKHD1Q8IWZ3 2542 aaKnown RBP7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 LINC01548A6NM66 108 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 ZG16O60844 167 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 LYZL6O75951 148 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 IGLV2-14P01704 120 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 KIR2DS4P43632 304 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 PRR30Q53SZ7 412 aaPredicted RBP7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 LCNL1Q6ZST4 164 aa7.53□□□□□ -1.2
SMARCAL1-202ENST00000358207 ZNF355PQ9NSJ1 428 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms