RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 C6orf226Q5I0X4 101 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 DEFB121Q5J5C9 76 aa13.23□□□□□ -0.29
RXRA-201ENST00000356384 GTF3AQ92664 365 aaKnown RBP13.23□□□□□ -0.29
RXRA-201ENST00000356384 hDV102S1A0JD36 115 aa13.22□□□□□ -0.29
RXRA-201ENST00000356384 PAQR4Q8N4S7 273 aaPredicted RBP13.22□□□□□ -0.29
RXRA-201ENST00000356384 C1orf159Q96HA4 380 aa13.22□□□□□ -0.29
RXRA-201ENST00000356384 EDA2RQ9HAV5 297 aa13.22□□□□□ -0.29
RXRA-201ENST00000356384 ACTL10Q5JWF8 245 aa13.22□□□□□ -0.29
RXRA-201ENST00000356384 SELLP14151 372 aa13.22□□□□□ -0.29
RXRA-201ENST00000356384 FBLN5Q9UBX5 448 aa13.22□□□□□ -0.29
RXRA-201ENST00000356384 SSBP2P81877 361 aaPredicted RBP13.22□□□□□ -0.29
RXRA-201ENST00000356384 TNFRSF14Q92956 283 aa13.22□□□□□ -0.29
RXRA-201ENST00000356384 PINLYPA6NC86 204 aa13.21□□□□□ -0.29
RXRA-201ENST00000356384 TRAV8-3A0A0A6YYJ7 113 aa13.21□□□□□ -0.29
RXRA-201ENST00000356384 LURAP1LQ8IV03 231 aa13.21□□□□□ -0.29
RXRA-201ENST00000356384 Q8TAT8 98 aa13.21□□□□□ -0.29
RXRA-201ENST00000356384 FCN3O75636 299 aa13.21□□□□□ -0.3
RXRA-201ENST00000356384 ZNF672Q499Z4 452 aaPredicted RBP13.21□□□□□ -0.3
RXRA-201ENST00000356384 A0A087X0K7 114 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 CACNA1EQ15878 2313 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 CEP250Q9BV73 2442 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 SRSF7Q16629 238 aaKnown RBP eCLIP13.2□□□□□ -0.3
RXRA-201ENST00000356384 ANAPC10Q9UM13 185 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 SH2D1AO60880 128 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 ERCC8Q13216 396 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 RPUSD1Q9UJJ7 312 aaKnown RBP13.2□□□□□ -0.3
RXRA-201ENST00000356384 TRAV13-1A0A0B4J241 112 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 ZNF138P52744 262 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 CMC4P56277 68 aaPredicted RBP13.2□□□□□ -0.3
RXRA-201ENST00000356384 LINC01559Q495D7 138 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 TMEM200BQ69YZ2 307 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 CSTL1Q9H114 145 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 SCN10AQ9Y5Y9 1956 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 IGKV1-12A0A0C4DH73 117 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 IGKV1D-12P01611 117 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 FOXF2Q12947 444 aa13.2□□□□□ -0.3
RXRA-201ENST00000356384 KLF17Q5JT82 389 aaPredicted RBP13.19□□□□□ -0.3
RXRA-201ENST00000356384 UBE2E2Q96LR5 201 aa13.19□□□□□ -0.3
RXRA-201ENST00000356384 INTS1Q8N201 2190 aaKnown RBP13.19□□□□□ -0.3
RXRA-201ENST00000356384 A0A1B0GWJ7 208 aa13.19□□□□□ -0.3
RXRA-201ENST00000356384 IGFL4Q6B9Z1 124 aa13.19□□□□□ -0.3
RXRA-201ENST00000356384 C14orf178Q8N769 122 aaPredicted RBP13.19□□□□□ -0.3
RXRA-201ENST00000356384 TRBV24-1A0A075B6N3 115 aa13.19□□□□□ -0.3
RXRA-201ENST00000356384 IGHV1-3A0A0C4DH29 117 aa13.19□□□□□ -0.3
RXRA-201ENST00000356384 VCYO14598 125 aa13.19□□□□□ -0.3
RXRA-201ENST00000356384 LILRA1O75019 489 aa13.19□□□□□ -0.3
RXRA-201ENST00000356384 RPL32P62910 135 aaKnown RBP13.19□□□□□ -0.3
RXRA-201ENST00000356384 MGST2Q99735 147 aa13.19□□□□□ -0.3
RXRA-201ENST00000356384 TRPM7Q96QT4 1865 aa13.19□□□□□ -0.3
RXRA-201ENST00000356384 LEPROTO15243 131 aa13.19□□□□□ -0.3
RXRA-201ENST00000356384 AGMATQ9BSE5 352 aa13.19□□□□□ -0.3
RXRA-201ENST00000356384 E9PLN8 166 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 IGHV1-8P0DP01 117 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 ESDP10768 282 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 MPZP25189 248 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 LCN12Q6JVE5 192 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 TMEM242Q9NWH2 141 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 HGFACQ04756 655 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 FAM90A2PQ658T7 463 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 FAM166AQ6J272 317 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 DTX1Q86Y01 620 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 DOPEY2Q9Y3R5 2298 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 GAGE2AQ6NT46 116 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 DLX4Q92988 240 aaPredicted RBP13.18□□□□□ -0.3
RXRA-201ENST00000356384 IGLV3-12A0A075B6K2 115 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 TRAV3A0A0B4J244 114 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 TPTE2P1Q5T6R2 138 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 BRD3OSQ6XYD6 125 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 BMPERQ8N8U9 685 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 SBF1O95248 1867 aa13.18□□□□□ -0.3
RXRA-201ENST00000356384 LINC01551Q86U37 167 aa13.17□□□□□ -0.3
RXRA-201ENST00000356384 LOC102723996A0A087X1L8 192 aa13.17□□□□□ -0.3
RXRA-201ENST00000356384 CD5P06127 495 aa13.17□□□□□ -0.3
RXRA-201ENST00000356384 FOXG1P55316 489 aaPredicted RBP13.17□□□□□ -0.3
RXRA-201ENST00000356384 TMEM158Q8WZ71 300 aa13.17□□□□□ -0.3
RXRA-201ENST00000356384 ARHGEF17Q96PE2 2063 aaPredicted RBP13.17□□□□□ -0.3
RXRA-201ENST00000356384 ZNF124Q15973 351 aa13.17□□□□□ -0.3
RXRA-201ENST00000356384 SPACA3Q8IXA5 215 aa13.17□□□□□ -0.3
RXRA-201ENST00000356384 RPRMLQ8N4K4 120 aa13.17□□□□□ -0.3
RXRA-201ENST00000356384 GFI1Q99684 422 aa13.17□□□□□ -0.3
RXRA-201ENST00000356384 NUP35Q8NFH5 326 aa13.17□□□□□ -0.3
RXRA-201ENST00000356384 H3BUX3 64 aa13.17□□□□□ -0.3
RXRA-201ENST00000356384 TMEM256Q8N2U0 113 aa13.17□□□□□ -0.3
RXRA-201ENST00000356384 A0A087WWL8 130 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 SMKR1H3BMG3 65 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 C9orf139Q6ZV77 190 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 SPXQ9BT56 116 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 GTSF1LQ9H1H1 148 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 COLCA2A8K830 154 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 PRIMA1Q86XR5 153 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 MESP1Q9BRJ9 268 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 SRRM5B3KS81 715 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 CRYGSP22914 178 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 MPV17L2Q567V2 206 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 SPSB3Q6PJ21 355 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 VWCEQ96DN2 955 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 TRGV9Q99603 122 aa13.16□□□□□ -0.3
RXRA-201ENST00000356384 CACNA1DQ01668 2161 aa13.15□□□□□ -0.3
RXRA-201ENST00000356384 MYMXA0A1B0GTQ4 84 aa13.15□□□□□ -0.3
RXRA-201ENST00000356384 LYPD3O95274 346 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 759.3 ms