RNA–Protein interactions for RNA: ENST00000356205.8

SLC39A1-202, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-202ENST00000356205 TNXAQ16473 311 aa12.95□□□□□ -0.34
SLC39A1-202ENST00000356205 MAPK1IP1LQ8NDC0 245 aa12.95□□□□□ -0.34
SLC39A1-202ENST00000356205 A0A1B0GUS0 222 aa12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 CGB1A6NKQ9 187 aa12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 FAM106CPP0CH98 169 aa12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 IGHV4-38-2P0DP08 117 aa12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 RPL27AP46776 148 aaKnown RBP12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 COMPP49747 757 aaPredicted RBP12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 USF2Q15853 346 aaPredicted RBP12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 FBLN7Q53RD9 439 aa12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 WDR73Q6P4I2 378 aa12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 MIR17HGQ75NE6 70 aa12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 OR10W1Q8NGF6 305 aa12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 SNHG12Q9BXW3 62 aa12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 WNK2Q9Y3S1 2297 aa12.94□□□□□ -0.34
SLC39A1-202ENST00000356205 A0A1W2PRE2 83 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 E7EUB6 86 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 M0R143 59 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 IGHV4-31P0DP07 118 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 TMEM11P17152 192 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 TAS2R45P59539 299 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 CX3CL1P78423 397 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 ERHP84090 104 aaKnown RBP12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 OR1L6Q8NGR2 347 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 ZNF503Q96F45 646 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 HELTA6NFD8 242 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 SLC17A3O00476 420 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 ISLRO14498 428 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 GNG4P50150 75 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 BRD3OSQ6XYD6 125 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 Q6ZWC4 215 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 RNF2Q99496 336 aa12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 MRPL32Q9BYC8 188 aaKnown RBP12.93□□□□□ -0.34
SLC39A1-202ENST00000356205 GRIFINA4D1Z8 144 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 M0QZK8 103 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 C5orf64Q2M2E5 130 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 CENPWQ5EE01 88 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 OR10J3Q5JRS4 329 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 NOTCH2Q04721 2471 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 IGKV1OR2-108A0A075B7D4 117 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 SERF1AO75920 110 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 TGFAP01135 160 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 RNASE2P10153 161 aaKnown RBP12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 WT1-ASQ06250 92 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 FAM120AOSQ5T036 256 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 CACNG8Q8WXS5 425 aa12.92□□□□□ -0.34
SLC39A1-202ENST00000356205 SNURFLB1AK76 121 aa12.91□□□□□ -0.34
SLC39A1-202ENST00000356205 FCN1O00602 326 aa12.91□□□□□ -0.34
SLC39A1-202ENST00000356205 HNF1AP20823 631 aa12.91□□□□□ -0.34
SLC39A1-202ENST00000356205 SSBP2P81877 361 aaPredicted RBP12.91□□□□□ -0.34
SLC39A1-202ENST00000356205 KLF17Q5JT82 389 aaPredicted RBP12.91□□□□□ -0.34
SLC39A1-202ENST00000356205 OR5AU1Q8NGC0 362 aa12.91□□□□□ -0.34
SLC39A1-202ENST00000356205 IGLC7A0M8Q6 106 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 PSMB11A5LHX3 300 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 TCAPO15273 167 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 AVPP01185 164 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 IGLV2-8P01709 118 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 CD69Q07108 199 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 TIGITQ495A1 244 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 SRSF12Q8WXF0 261 aaKnown RBP12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 IGF2BP2-AS1Q96M15 143 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 C1RLQ9NZP8 487 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 NCBP2LA6PVI3 153 aaKnown RBP12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 REG1AP05451 166 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 CRYBB3P26998 211 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 IER3P46695 156 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 SLC25A33Q9BSK2 321 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 MEGF9Q9H1U4 602 aa12.9□□□□□ -0.34
SLC39A1-202ENST00000356205 SMIM27A0A1W2PRY6 76 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 ZNF705FA8MVS1 300 aaPredicted RBP12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 GGTLC3B5MD39 225 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 TEX22C9J3V5 150 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 ZNF705DP0CH99 300 aaPredicted RBP12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 ZNF705BP0CI00 300 aaPredicted RBP12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 C8orf88P0DMB2 117 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 SUB1P53999 127 aaKnown RBP eCLIP12.89□□□□□ -0.358e-6■■■□□ 15.3
SLC39A1-202ENST00000356205 TMEM136Q6ZRR5 245 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 OR8I2Q8N0Y5 310 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 TNCP24821 2201 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 CNIH1O95406 144 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 FOSL1P15407 271 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 TMEM183BQ1AE95 376 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 RASL11AQ6T310 242 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 FOXC2Q99958 501 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 MIEN1Q9BRT3 115 aa12.89□□□□□ -0.35
SLC39A1-202ENST00000356205 OR5I1Q13606 314 aa12.88□□□□□ -0.35
SLC39A1-202ENST00000356205 BAGE3Q86Y29 109 aa12.88□□□□□ -0.35
SLC39A1-202ENST00000356205 BAGE2Q86Y30 109 aa12.88□□□□□ -0.35
SLC39A1-202ENST00000356205 WFDC11Q8NEX6 87 aa12.88□□□□□ -0.35
SLC39A1-202ENST00000356205 HSPB9Q9BQS6 159 aa12.88□□□□□ -0.35
SLC39A1-202ENST00000356205 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.88□□□□□ -0.353e-9■■□□□ 13.8
SLC39A1-202ENST00000356205 HLA-DQA1P01909 254 aa12.87□□□□□ -0.35
SLC39A1-202ENST00000356205 GPX1P07203 203 aa12.87□□□□□ -0.35
SLC39A1-202ENST00000356205 BPIFB3P59826 476 aa12.87□□□□□ -0.35
SLC39A1-202ENST00000356205 TOMM20LQ6UXN7 152 aa12.87□□□□□ -0.35
SLC39A1-202ENST00000356205 FAM231DQ6ZW35 169 aa12.87□□□□□ -0.35
SLC39A1-202ENST00000356205 FAM167A-AS1Q96KT0 104 aa12.87□□□□□ -0.35
SLC39A1-202ENST00000356205 CDC42EP3Q9UKI2 254 aa12.87□□□□□ -0.35
SLC39A1-202ENST00000356205 CR1P17927 2039 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms