RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PLSCR4Q9NRQ2 329 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 WNK2Q9Y3S1 2297 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 TMSB15BA0A087X1C1 80 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 ITGB1BP1O14713 200 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 FCN3O75636 299 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 FAM27E3Q08E93 113 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 GOLT1AQ6ZVE7 132 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 IGFBPL1Q8WX77 278 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 MED13LQ71F56 2210 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 TTC28Q96AY4 2481 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 TRAV30A0A087WSZ9 112 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 A8MWL6 223 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 HTR1DP28221 377 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 RASL11AQ6T310 242 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 ZNF788Q6ZQV5 615 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 CACNG8Q8WXS5 425 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 SAP30O75446 220 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 ARMS2P0C7Q2 107 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 LYZP61626 148 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 WFDC3Q8IUB2 231 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 C1orf162Q8NEQ5 155 aaPredicted RBP8.12□□□□□ -1.11
PTPRA-203ENST00000356147 C17orf77Q96MU5 243 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 MAP1LC3CQ9BXW4 147 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 TMEM191AQ9H0A3 160 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 HILPDAQ9Y5L2 63 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 S4R3C0 116 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 CDX4O14627 284 aaPredicted RBP8.12□□□□□ -1.11
PTPRA-203ENST00000356147 IGHG3P01860 377 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 APOHP02749 345 aaPredicted RBP8.12□□□□□ -1.11
PTPRA-203ENST00000356147 GLRXP35754 106 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 CFHR2P36980 270 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 MYCNOSP40205 109 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 ARF6P62330 175 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 LOXL1Q08397 574 aaPredicted RBP8.12□□□□□ -1.11
PTPRA-203ENST00000356147 OCIAD2Q56VL3 154 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 OR8A1Q8NGG7 326 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 MLST8Q9BVC4 326 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 ST20Q9HBF5 79 aa8.12□□□□□ -1.11
PTPRA-203ENST00000356147 TCRAP04437 139 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 RIPPLY3P57055 190 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 LYPD2Q6UXB3 125 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 OSR1Q8TAX0 266 aaPredicted RBP8.11□□□□□ -1.11
PTPRA-203ENST00000356147 SRSF12Q8WXF0 261 aaKnown RBP8.11□□□□□ -1.11
PTPRA-203ENST00000356147 CCL17Q92583 94 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 SARAFQ96BY9 339 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 TMEM200BQ69YZ2 307 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 RBPMS2Q6ZRY4 209 aaKnown RBP8.11□□□□□ -1.11
PTPRA-203ENST00000356147 ZNF833PQ6ZTB9 187 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 DEFB125Q8N687 156 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 PERPQ96FX8 193 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 SCRT2Q9NQ03 307 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 ASH1LQ9NR48 2969 aaKnown RBP8.11□□□□□ -1.11
PTPRA-203ENST00000356147 APC2O95996 2303 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 MALRD1Q5VYJ5 2156 aa8.11□□□□□ -1.11
PTPRA-203ENST00000356147 RAB37Q96AX2 223 aa8.1□□□□□ -1.11
PTPRA-203ENST00000356147 CHRDL1Q9BU40 450 aa8.1□□□□□ -1.11
PTPRA-203ENST00000356147 ACACAQ13085 2346 aa8.1□□□□□ -1.11
PTPRA-203ENST00000356147 GAGE12BA1L429 117 aa8.1□□□□□ -1.11
PTPRA-203ENST00000356147 TM4SF20Q53R12 229 aa8.1□□□□□ -1.11
PTPRA-203ENST00000356147 ATP5L2Q7Z4Y8 100 aa8.1□□□□□ -1.11
PTPRA-203ENST00000356147 OR4C13Q8NGP0 309 aa8.1□□□□□ -1.11
PTPRA-203ENST00000356147 PRSS22Q9GZN4 317 aa8.1□□□□□ -1.11
PTPRA-203ENST00000356147 NBASA2RRP1 2371 aa8.1□□□□□ -1.11
PTPRA-203ENST00000356147 DCHS2Q6V1P9 2916 aa8.1□□□□□ -1.11
PTPRA-203ENST00000356147 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.09□□□□□ -1.11
PTPRA-203ENST00000356147 SERTM2A0A1B0GWG4 89 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 C19orf71A6NCJ1 209 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 GPR183P32249 361 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 DEFB109BQ30KR1 87 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 PRSS57Q6UWY2 283 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 OR5AN1Q8NGI8 311 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 RAB9BQ9NP90 201 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 ABCA4P78363 2273 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 C7orf71A4D174 169 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 CRXO43186 299 aaPredicted RBP8.09□□□□□ -1.11
PTPRA-203ENST00000356147 LIPFP07098 398 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 SUB1P53999 127 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTPRA-203ENST00000356147 ZGRF1Q86YA3 2104 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 C5orf17Q8NAS9 161 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 PRSS3P2Q8NHM4 247 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 TMEM167AQ8TBQ9 72 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 FAM222BQ8WU58 562 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 NEU4Q8WWR8 484 aaPredicted RBP8.09□□□□□ -1.11
PTPRA-203ENST00000356147 SH3BGRL2Q9UJC5 107 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 RIF1Q5UIP0 2472 aaKnown RBP8.09□□□□□ -1.11
PTPRA-203ENST00000356147 M0R3E3 92 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 LTAP01374 205 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 IGLV2-23P01705 113 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 RBP4P02753 201 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 OR5AL1P0C617 328 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 GP9P14770 177 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 C12orf54Q6X4T0 127 aa8.09□□□□□ -1.11
PTPRA-203ENST00000356147 ZNF785A8K8V0 405 aa8.08□□□□□ -1.12
PTPRA-203ENST00000356147 HLA-DRB1P01911 266 aa8.08□□□□□ -1.12
PTPRA-203ENST00000356147 IFI27P40305 119 aaPredicted RBP8.08□□□□□ -1.12
PTPRA-203ENST00000356147 RHOGP84095 191 aa8.08□□□□□ -1.12
PTPRA-203ENST00000356147 C2orf91Q6ZV80 131 aa8.08□□□□□ -1.12
PTPRA-203ENST00000356147 CHCHD1Q96BP2 118 aaKnown RBP8.08□□□□□ -1.12
PTPRA-203ENST00000356147 KLF12Q9Y4X4 402 aa8.08□□□□□ -1.12
PTPRA-203ENST00000356147 AKAP13Q12802 2813 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms