RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 OR1C1Q15619 314 aa12.68□□□□□ -0.38
RTN3-205ENST00000356000 TAL2Q16559 108 aa12.68□□□□□ -0.38
RTN3-205ENST00000356000 SLC25A2Q9BXI2 301 aa12.68□□□□□ -0.38
RTN3-205ENST00000356000 MRPL32Q9BYC8 188 aaKnown RBP12.68□□□□□ -0.38
RTN3-205ENST00000356000 TTTY13Q9BZ97 58 aa12.68□□□□□ -0.38
RTN3-205ENST00000356000 IFI27P40305 119 aaPredicted RBP12.67□□□□□ -0.38
RTN3-205ENST00000356000 RITA1Q96K30 269 aa12.67□□□□□ -0.38
RTN3-205ENST00000356000 PPDPFQ9H3Y8 114 aa12.67□□□□□ -0.38
RTN3-205ENST00000356000 IFI27L1Q96BM0 104 aa12.67□□□□□ -0.38
RTN3-205ENST00000356000 TANC2Q9HCD6 1990 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 KIR2DL1P43626 348 aaPredicted RBP12.66□□□□□ -0.38
RTN3-205ENST00000356000 GATD1Q8NB37 220 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 DKK2Q9UBU2 259 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 KLF12Q9Y4X4 402 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 PCSK5Q92824 1860 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 ADAMTS20P59510 1910 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 PF4V1P10720 104 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 CD27P26842 260 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 YPEL5P62699 121 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 FADS6Q8N9I5 356 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 OR5AN1Q8NGI8 311 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 FOXB1Q99853 325 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 DKK4Q9UBT3 224 aa12.66□□□□□ -0.38
RTN3-205ENST00000356000 HCFC1P51610 2035 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 IGKV1OR2-108A0A075B7D4 117 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 SHISA9B4DS77 424 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 TMEM262E9PQX1 116 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 OVOL3O00110 214 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 ZNF542PQ5EBM4 170 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 MORN5Q5VZ52 161 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 RND1Q92730 232 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 KIR2DL4Q99706 377 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 C12orf77C9JDV5 145 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 ITLN1Q8WWA0 313 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 HHLA3Q9XRX5 114 aa12.65□□□□□ -0.38
RTN3-205ENST00000356000 TRAV3A0A0B4J244 114 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 IGLV3-19P01714 112 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 ZNF688P0C7X2 276 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 C5orf47Q569G3 176 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 FAM169BQ8N8A8 192 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 NFAM1Q8NET5 270 aaPredicted RBP12.64□□□□□ -0.39
RTN3-205ENST00000356000 PPP1R35Q8TAP8 253 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 MAP1LC3AQ9H492 121 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 CDX4O14627 284 aaPredicted RBP12.64□□□□□ -0.39
RTN3-205ENST00000356000 HBDP02042 147 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 HLA-DRB4P13762 266 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 SPINK2P20155 84 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 MYCNOSP40205 109 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 GFERP55789 205 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 GNG5P63218 68 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 GAGE2BQ13066 116 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 GAGE2EQ4V326 116 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 TEN1Q86WV5 123 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 DLX4Q92988 240 aaPredicted RBP12.64□□□□□ -0.39
RTN3-205ENST00000356000 ZMAT4Q9H898 229 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 GAGE2DQ9UEU5 116 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 HLA-DRB4X5D2U9 266 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 ZNF292O60281 2723 aa12.64□□□□□ -0.39
RTN3-205ENST00000356000 TRBV20-1A0A075B6N2 111 aa12.63□□□□□ -0.39
RTN3-205ENST00000356000 MOSP00540 346 aa12.63□□□□□ -0.39
RTN3-205ENST00000356000 FCGR3BO75015 233 aa12.63□□□□□ -0.39
RTN3-205ENST00000356000 NGFP01138 241 aa12.63□□□□□ -0.39
RTN3-205ENST00000356000 PAX8Q06710 450 aa12.63□□□□□ -0.39
RTN3-205ENST00000356000 FOXF2Q12947 444 aa12.63□□□□□ -0.39
RTN3-205ENST00000356000 C1orf61Q13536 156 aa12.63□□□□□ -0.39
RTN3-205ENST00000356000 RPEQ96AT9 228 aa12.63□□□□□ -0.39
RTN3-205ENST00000356000 EPDR1Q9UM22 224 aa12.63□□□□□ -0.39
RTN3-205ENST00000356000 CACNA1DQ01668 2161 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 WI2-2373I1.2A0A1W2PRP0 233 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 NDUFS7O75251 213 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 PYYP10082 97 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 IFITM1P13164 125 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 SLC22A18ASQ8N1D0 253 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 DAZAP1Q96EP5 407 aaKnown RBP12.62□□□□□ -0.39
RTN3-205ENST00000356000 PTPRBP23467 1997 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 ERVK-16P61578 105 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 SLC25A48Q6ZT89 311 aaKnown RBP12.62□□□□□ -0.39
RTN3-205ENST00000356000 MOB3BQ86TA1 216 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 VKORC1L1Q8N0U8 176 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 OR13H1Q8NG92 308 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 TMEM158Q8WZ71 300 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 PAXXQ9BUH6 204 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 FAM234AQ9H0X4 552 aa12.62□□□□□ -0.39
RTN3-205ENST00000356000 PTPRZ1P23471 2315 aaPredicted RBP12.62□□□□□ -0.39
RTN3-205ENST00000356000 HEATR1Q9H583 2144 aaKnown RBP12.62□□□□□ -0.39
RTN3-205ENST00000356000 FCN3O75636 299 aa12.61□□□□□ -0.39
RTN3-205ENST00000356000 AJUBAQ96IF1 538 aa12.61□□□□□ -0.39
RTN3-205ENST00000356000 CABIN1Q9Y6J0 2220 aa12.61□□□□□ -0.39
RTN3-205ENST00000356000 A0A1B0GUT8 65 aa12.61□□□□□ -0.39
RTN3-205ENST00000356000 MORN3Q6PF18 240 aaPredicted RBP12.61□□□□□ -0.39
RTN3-205ENST00000356000 Q6Q795 121 aa12.61□□□□□ -0.39
RTN3-205ENST00000356000 PTH2Q96A98 100 aa12.61□□□□□ -0.39
RTN3-205ENST00000356000 ASCC3Q8N3C0 2202 aaKnown RBP12.61□□□□□ -0.39
RTN3-205ENST00000356000 TMEM30CPA0ZSE6 113 aa12.6□□□□□ -0.39
RTN3-205ENST00000356000 J3QT63 122 aa12.6□□□□□ -0.39
RTN3-205ENST00000356000 EVI2AP22794 236 aa12.6□□□□□ -0.39
RTN3-205ENST00000356000 TTC32Q5I0X7 151 aa12.6□□□□□ -0.39
RTN3-205ENST00000356000 KLF17Q5JT82 389 aaPredicted RBP12.6□□□□□ -0.39
RTN3-205ENST00000356000 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms