RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 MS4A6AQ9H2W1 248 aa12.24□□□□□ -0.45
VAT1-201ENST00000355653 Q9H3A6 140 aa12.24□□□□□ -0.45
VAT1-201ENST00000355653 SOX21Q9Y651 276 aaPredicted RBP12.24□□□□□ -0.45
VAT1-201ENST00000355653 FAM231BA6NCW3 169 aa12.24□□□□□ -0.45
VAT1-201ENST00000355653 C22orf46C9J442 243 aa12.24□□□□□ -0.45
VAT1-201ENST00000355653 SUB1P53999 127 aaKnown RBP eCLIP12.24□□□□□ -0.451e-8■■■■□ 26.3
VAT1-201ENST00000355653 DIAPH2-AS1Q14236 149 aa12.24□□□□□ -0.45
VAT1-201ENST00000355653 PRNTQ86SH4 94 aa12.24□□□□□ -0.45
VAT1-201ENST00000355653 C5orf17Q8NAS9 161 aa12.24□□□□□ -0.45
VAT1-201ENST00000355653 TPPP3Q9BW30 176 aa12.24□□□□□ -0.45
VAT1-201ENST00000355653 ZNF883P0CG24 379 aa12.23□□□□□ -0.45
VAT1-201ENST00000355653 COX8AP10176 69 aa12.23□□□□□ -0.45
VAT1-201ENST00000355653 STXBP6Q8NFX7 210 aa12.23□□□□□ -0.45
VAT1-201ENST00000355653 NCOR1P1Q9H4R4 102 aa12.23□□□□□ -0.45
VAT1-201ENST00000355653 IGLC1P0CG04 106 aa12.23□□□□□ -0.45
VAT1-201ENST00000355653 SP9P0CG40 484 aa12.23□□□□□ -0.45
VAT1-201ENST00000355653 CCL3L1P16619 93 aa12.23□□□□□ -0.45
VAT1-201ENST00000355653 CT83Q5H943 113 aa12.23□□□□□ -0.45
VAT1-201ENST00000355653 TMEM116Q8NCL8 245 aa12.23□□□□□ -0.45
VAT1-201ENST00000355653 AP1S3Q96PC3 154 aa12.23□□□□□ -0.45
VAT1-201ENST00000355653 AP5S1Q9NUS5 200 aa12.23□□□□□ -0.45
VAT1-201ENST00000355653 CDX4O14627 284 aaPredicted RBP12.22□□□□□ -0.45
VAT1-201ENST00000355653 TMEM97Q5BJF2 176 aa12.22□□□□□ -0.45
VAT1-201ENST00000355653 LINC01545Q5VT33 79 aa12.22□□□□□ -0.45
VAT1-201ENST00000355653 SMIM12Q96EX1 92 aa12.22□□□□□ -0.45
VAT1-201ENST00000355653 ZNF71Q9NQZ8 489 aaPredicted RBP12.22□□□□□ -0.45
VAT1-201ENST00000355653 TPSG1Q9NRR2 321 aa12.22□□□□□ -0.45
VAT1-201ENST00000355653 PROCRQ9UNN8 238 aa12.22□□□□□ -0.45
VAT1-201ENST00000355653 SLC25A17O43808 307 aa12.22□□□□□ -0.45
VAT1-201ENST00000355653 TNFAIP6P98066 277 aaPredicted RBP12.22□□□□□ -0.45
VAT1-201ENST00000355653 ZNF833PQ6ZTB9 187 aa12.22□□□□□ -0.45
VAT1-201ENST00000355653 THAP8Q8NA92 274 aa12.22□□□□□ -0.45
VAT1-201ENST00000355653 OR8A1Q8NGG7 326 aa12.22□□□□□ -0.45
VAT1-201ENST00000355653 NEU4Q8WWR8 484 aaPredicted RBP12.22□□□□□ -0.45
VAT1-201ENST00000355653 ZNF492Q9P255 531 aa12.22□□□□□ -0.45
VAT1-201ENST00000355653 HILPDAQ9Y5L2 63 aa12.22□□□□□ -0.45
VAT1-201ENST00000355653 KALRNO60229 2985 aa12.21□□□□□ -0.45
VAT1-201ENST00000355653 GOLT1AQ6ZVE7 132 aa12.21□□□□□ -0.45
VAT1-201ENST00000355653 PRSS3P2Q8NHM4 247 aa12.21□□□□□ -0.45
VAT1-201ENST00000355653 GFRA4Q9GZZ7 299 aa12.21□□□□□ -0.45
VAT1-201ENST00000355653 SLC25A15Q9Y619 301 aa12.21□□□□□ -0.45
VAT1-201ENST00000355653 ARMS2P0C7Q2 107 aa12.21□□□□□ -0.46
VAT1-201ENST00000355653 FA2HQ7L5A8 372 aa12.21□□□□□ -0.46
VAT1-201ENST00000355653 EXOC3-AS1Q8N2X6 119 aa12.21□□□□□ -0.46
VAT1-201ENST00000355653 OR10X1Q8NGY0 326 aa12.21□□□□□ -0.46
VAT1-201ENST00000355653 ROS1P08922 2347 aa12.21□□□□□ -0.46
VAT1-201ENST00000355653 CACNA1GO43497 2377 aa12.21□□□□□ -0.46
VAT1-201ENST00000355653 A0A1W2PPI3 338 aa12.2□□□□□ -0.46
VAT1-201ENST00000355653 CCL11P51671 97 aa12.2□□□□□ -0.46
VAT1-201ENST00000355653 SRSF6Q13247 344 aaKnown RBP12.2□□□□□ -0.46
VAT1-201ENST00000355653 Q86TA4 180 aa12.2□□□□□ -0.46
VAT1-201ENST00000355653 ZCCHC24Q8N2G6 241 aaKnown RBP12.2□□□□□ -0.46
VAT1-201ENST00000355653 OR4C13Q8NGP0 309 aa12.2□□□□□ -0.46
VAT1-201ENST00000355653 SRSF12Q8WXF0 261 aaKnown RBP12.2□□□□□ -0.46
VAT1-201ENST00000355653 LOC389332A0A1B0GUA5 103 aa12.2□□□□□ -0.46
VAT1-201ENST00000355653 H3BUT2 72 aa12.2□□□□□ -0.46
VAT1-201ENST00000355653 GP9P14770 177 aa12.2□□□□□ -0.46
VAT1-201ENST00000355653 TMEM167AQ8TBQ9 72 aa12.2□□□□□ -0.46
VAT1-201ENST00000355653 FAM222BQ8WU58 562 aa12.2□□□□□ -0.46
VAT1-201ENST00000355653 ZNF747Q9BV97 191 aa12.2□□□□□ -0.46
VAT1-201ENST00000355653 PLSCR4Q9NRQ2 329 aa12.2□□□□□ -0.46
VAT1-201ENST00000355653 PRR33A8MZF0 331 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 FAM106CPP0CH98 169 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 FXYD7P58549 80 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 FAM106AQ4KMX7 169 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 ZNF788Q6ZQV5 615 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 RAB37Q96AX2 223 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 IGHV3-72A0A0B4J1Y9 119 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 TMEM238LA0A1B0GVL6 79 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 HAX1O00165 279 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 NHLH1Q02575 133 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 FER1L6-AS1Q8NA97 138 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 OR5AN1Q8NGI8 311 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 JMJD8Q96S16 334 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 RABAC1Q9UI14 185 aa12.19□□□□□ -0.46
VAT1-201ENST00000355653 A0A1B0GUT8 65 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 TM4SF5O14894 197 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 ENSAO43768 121 aaKnown RBP12.18□□□□□ -0.46
VAT1-201ENST00000355653 IGHG3P01860 377 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 VSTM2AQ8TAG5 236 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 RITA1Q96K30 269 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 CHTOPQ9Y3Y2 248 aaKnown RBP12.18□□□□□ -0.46
VAT1-201ENST00000355653 DMXL2Q8TDJ6 3036 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 IGHV1-46P01743 117 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 CSN1S1P47710 185 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 LYZP61626 148 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 SEC11AP67812 179 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 GTF2H5Q6ZYL4 71 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 WFDC8Q8IUA0 241 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 OR10AG1Q8NH19 301 aa12.18□□□□□ -0.46
VAT1-201ENST00000355653 NKX2-8O15522 239 aa12.17□□□□□ -0.46
VAT1-201ENST00000355653 GLRXP35754 106 aa12.17□□□□□ -0.46
VAT1-201ENST00000355653 CCL8P80075 99 aa12.17□□□□□ -0.46
VAT1-201ENST00000355653 LOXL1Q08397 574 aaPredicted RBP12.17□□□□□ -0.46
VAT1-201ENST00000355653 C16orf54Q6UWD8 224 aa12.17□□□□□ -0.46
VAT1-201ENST00000355653 IFI27P40305 119 aaPredicted RBP12.17□□□□□ -0.46
VAT1-201ENST00000355653 LINC00312Q9Y6C7 94 aa12.17□□□□□ -0.46
VAT1-201ENST00000355653 LAMA5O15230 3695 aa12.17□□□□□ -0.46
VAT1-201ENST00000355653 SERTM2A0A1B0GWG4 89 aa12.17□□□□□ -0.46
VAT1-201ENST00000355653 TMEM238C9JI98 176 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms