RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 TMEM183AQ8IXX5 376 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 MDKP21741 143 aaPredicted RBP7.85□□□□□ -1.15
GABPA-201ENST00000354828 SCRT1Q9BWW7 348 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 ZNF256Q9Y2P7 627 aaPredicted RBP7.85□□□□□ -1.15
GABPA-201ENST00000354828 TRGV1A0A0A0MS02 117 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 MT-ND6P03923 174 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 FER1L6-AS1Q8NA97 138 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 NAV2Q8IVL1 2488 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 C19orf84I3L1E1 186 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 IGHV4-38-2P0DP08 117 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 ZMAT4Q9H898 229 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 SCO2A0A1W2PP80 73 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 ITGB1BP1O14713 200 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 HLA-DQA1P01909 254 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 TCTAP57738 103 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 C9orf139Q6ZV77 190 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 SLC25A39Q9BZJ4 359 aaPredicted RBP7.84□□□□□ -1.15
GABPA-201ENST00000354828 CEP350Q5VT06 3117 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 TRAV5A0A0B4J249 113 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 ATP5G3P48201 142 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 C17orf58Q2M2W7 97 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 FBXL19-AS1Q494R0 122 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 STPG2Q8N412 459 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 TSSC4Q9Y5U2 329 aaPredicted RBP7.84□□□□□ -1.15
GABPA-201ENST00000354828 A0A1B0GUS0 222 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 ZNF98A6NK75 572 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 FGF16O43320 207 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 PPP1R17O96001 155 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 INSP01308 110 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 IGKV1-5P01602 117 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 ELANEP08246 267 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 DEFB130BP0DP73 79 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 DEFB130AP0DP74 79 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 PSMB2P49721 201 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 MEIG1Q5JSS6 88 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 OR10D4PQ8NGN7 298 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 RCHY1Q96PM5 261 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 IFT22Q9H7X7 185 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 CTSZQ9UBR2 303 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 PSG8Q9UQ74 426 aa7.84□□□□□ -1.15
GABPA-201ENST00000354828 CHD8Q9HCK8 2581 aa7.84□□□□□ -1.16
GABPA-201ENST00000354828 SRRM4A7MD48 611 aaKnown RBP7.83□□□□□ -1.16
GABPA-201ENST00000354828 HOXB4P17483 251 aaPredicted RBP7.83□□□□□ -1.16
GABPA-201ENST00000354828 HNRNPA3P51991 378 aaKnown RBP7.83□□□□□ -1.16
GABPA-201ENST00000354828 IGHV3-53P01767 116 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 IQCJQ1A5X6 159 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 TRGV9Q99603 122 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 SRSF8Q9BRL6 282 aaKnown RBP7.83□□□□□ -1.16
GABPA-201ENST00000354828 PRADC1Q9BSG0 188 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 CHCHD5Q9BSY4 110 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 LIME1Q9H400 295 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 WDR83OSQ9Y284 106 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 A0A087WX48 190 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 A0A1W2PPI3 338 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 PSCAO43653 123 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 NDUFB8O95169 186 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 PPIFP30405 207 aaKnown RBP7.83□□□□□ -1.16
GABPA-201ENST00000354828 RSPO1Q2MKA7 263 aaPredicted RBP7.83□□□□□ -1.16
GABPA-201ENST00000354828 MST1LQ2TV78 715 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 TREML4Q6UXN2 200 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 CBLN2Q8IUK8 224 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 OR4C5Q8NGB2 326 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 SDHCQ99643 169 aaPredicted RBP7.83□□□□□ -1.16
GABPA-201ENST00000354828 RSPO3Q9BXY4 272 aaPredicted RBP7.83□□□□□ -1.16
GABPA-201ENST00000354828 NCOR1P1Q9H4R4 102 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 PLXNB3Q9ULL4 1909 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 TRAV12-3A0A0B4J271 114 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 MMP23AO75900 390 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 QRFPP83859 136 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 BIVMQ86UB2 503 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 EPDR1Q9UM22 224 aa7.83□□□□□ -1.16
GABPA-201ENST00000354828 GCSAMLQ5JQS6 135 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 TCTEX1D4Q5JR98 221 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 SFRP2Q96HF1 295 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 IGKV2-40A0A087WW87 121 aaPredicted RBP7.82□□□□□ -1.16
GABPA-201ENST00000354828 CXorf65A6NEN9 183 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 IGKV2D-40P01614 121 aaPredicted RBP7.82□□□□□ -1.16
GABPA-201ENST00000354828 LHFPL1Q86WI0 220 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 TOMM7Q9P0U1 55 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 TMEM250H0YL14 139 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 MALP21145 153 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 HBBP68871 147 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 XCL2Q9UBD3 114 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 HIVEP3Q5T1R4 2406 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.82□□□□□ -1.16
GABPA-201ENST00000354828 LINC00311Q8N616 119 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 VN1R17PQ8TDU5 208 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 RNF138Q8WVD3 245 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 PCDH15Q96QU1 1955 aa7.82□□□□□ -1.16
GABPA-201ENST00000354828 A0A1B0GUT8 65 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 GCSHP23434 173 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 KIAA1644Q3SXP7 199 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 ZNF833PQ6ZTB9 187 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 LRTM2Q8N967 370 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 OR4D5Q8NGN0 318 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 IGFL4Q6B9Z1 124 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 Q6ZS49 121 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 RPP21Q9H633 154 aaKnown RBP7.81□□□□□ -1.16
GABPA-201ENST00000354828 APOC4P55056 127 aa7.81□□□□□ -1.16
GABPA-201ENST00000354828 NPIPB5A8MRT5 1133 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms