RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 PUS1Q9Y606 427 aaKnown RBP eCLIP15.94■□□□□ 0.14
TRIM4-202ENST00000354241 LOC105371267A0A1B0GV96 52 aa15.93■□□□□ 0.14
TRIM4-202ENST00000354241 C11orf94C9JXX5 98 aa15.93■□□□□ 0.14
TRIM4-202ENST00000354241 TGOLN2O43493 480 aa15.93■□□□□ 0.14
TRIM4-202ENST00000354241 PYYP10082 97 aa15.93■□□□□ 0.14
TRIM4-202ENST00000354241 UBE2L3P68036 154 aaKnown RBP15.93■□□□□ 0.14
TRIM4-202ENST00000354241 GUCA2BQ16661 112 aa15.93■□□□□ 0.14
TRIM4-202ENST00000354241 SOHLH1Q5JUK2 328 aa15.93■□□□□ 0.14
TRIM4-202ENST00000354241 LEMD1Q68G75 181 aa15.93■□□□□ 0.14
TRIM4-202ENST00000354241 OR51M1Q9H341 326 aa15.93■□□□□ 0.14
TRIM4-202ENST00000354241 NOTCH2Q04721 2471 aa15.93■□□□□ 0.14
TRIM4-202ENST00000354241 ATP5G3P48201 142 aa15.92■□□□□ 0.14
TRIM4-202ENST00000354241 RAB9AP51151 201 aa15.92■□□□□ 0.14
TRIM4-202ENST00000354241 USF2Q15853 346 aaPredicted RBP15.92■□□□□ 0.14
TRIM4-202ENST00000354241 ZNF600Q6ZNG1 722 aa15.92■□□□□ 0.14
TRIM4-202ENST00000354241 YTHDF2Q9Y5A9 579 aaKnown RBP15.92■□□□□ 0.14
TRIM4-202ENST00000354241 IGHV3-11P01762 117 aa15.92■□□□□ 0.14
TRIM4-202ENST00000354241 IGHG4P01861 327 aa15.92■□□□□ 0.14
TRIM4-202ENST00000354241 SRD5A1P18405 259 aa15.92■□□□□ 0.14
TRIM4-202ENST00000354241 C10orf99Q6UWK7 81 aa15.92■□□□□ 0.14
TRIM4-202ENST00000354241 ESM1Q9NQ30 184 aa15.92■□□□□ 0.14
TRIM4-202ENST00000354241 PPP5D1E7EU14 171 aa15.91■□□□□ 0.14
TRIM4-202ENST00000354241 SCO1O75880 301 aa15.91■□□□□ 0.14
TRIM4-202ENST00000354241 FAM74A7A6NL05 159 aa15.9■□□□□ 0.14
TRIM4-202ENST00000354241 SLC35B1P78383 322 aa15.9■□□□□ 0.14
TRIM4-202ENST00000354241 SVBPQ8N300 66 aa15.9■□□□□ 0.14
TRIM4-202ENST00000354241 ATP6V0BQ99437 205 aa15.9■□□□□ 0.14
TRIM4-202ENST00000354241 ANK3Q12955 4377 aaKnown RBP15.9■□□□□ 0.14
TRIM4-202ENST00000354241 A0A0G2JLM5 398 aa15.9■□□□□ 0.14
TRIM4-202ENST00000354241 FAM181BA6NEQ2 426 aa15.9■□□□□ 0.14
TRIM4-202ENST00000354241 H3BRN7 92 aa15.9■□□□□ 0.14
TRIM4-202ENST00000354241 PSMB8P28062 276 aa15.9■□□□□ 0.14
TRIM4-202ENST00000354241 STXBP6Q8NFX7 210 aa15.9■□□□□ 0.14
TRIM4-202ENST00000354241 SHANK2-AS3Q9BTD1 123 aa15.9■□□□□ 0.14
TRIM4-202ENST00000354241 IGHV3OR16-8A0A075B7F1 116 aa15.89■□□□□ 0.13
TRIM4-202ENST00000354241 ARL3P36405 182 aa15.89■□□□□ 0.13
TRIM4-202ENST00000354241 Q8N2B8 174 aa15.89■□□□□ 0.13
TRIM4-202ENST00000354241 ZNF414Q96IQ9 312 aa15.89■□□□□ 0.13
TRIM4-202ENST00000354241 CDC42EP3Q9UKI2 254 aa15.89■□□□□ 0.13
TRIM4-202ENST00000354241 SNRPCP09234 159 aaKnown RBP15.88■□□□□ 0.13
TRIM4-202ENST00000354241 CD99P14209 185 aa15.88■□□□□ 0.13
TRIM4-202ENST00000354241 RELQ04864 619 aaPredicted RBP15.88■□□□□ 0.13
TRIM4-202ENST00000354241 FAM90A2PQ658T7 463 aa15.88■□□□□ 0.13
TRIM4-202ENST00000354241 TOMM20LQ6UXN7 152 aa15.88■□□□□ 0.13
TRIM4-202ENST00000354241 Q71RC1 249 aaPredicted RBP15.88■□□□□ 0.13
TRIM4-202ENST00000354241 S100A7AQ86SG5 101 aa15.88■□□□□ 0.13
TRIM4-202ENST00000354241 OR4X2Q8NGF9 303 aa15.88■□□□□ 0.13
TRIM4-202ENST00000354241 FXYD5Q96DB9 178 aa15.88■□□□□ 0.13
TRIM4-202ENST00000354241 TMEM89A2RUT3 159 aa15.88■□□□□ 0.13
TRIM4-202ENST00000354241 BMPR1BO00238 502 aa15.88■□□□□ 0.13
TRIM4-202ENST00000354241 TRBV12-3P01733 135 aa15.88■□□□□ 0.13
TRIM4-202ENST00000354241 TXNDC17Q9BRA2 123 aa15.88■□□□□ 0.13
TRIM4-202ENST00000354241 RABAC1Q9UI14 185 aa15.88■□□□□ 0.13
TRIM4-202ENST00000354241 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.87■□□□□ 0.13
TRIM4-202ENST00000354241 TMEM250H0YL14 139 aa15.87■□□□□ 0.13
TRIM4-202ENST00000354241 PDE6DO43924 150 aa15.87■□□□□ 0.13
TRIM4-202ENST00000354241 GP9P14770 177 aa15.87■□□□□ 0.13
TRIM4-202ENST00000354241 TEX38Q6PEX7 206 aa15.87■□□□□ 0.13
TRIM4-202ENST00000354241 ATRAIDQ6UW56 229 aa15.87■□□□□ 0.13
TRIM4-202ENST00000354241 ZFAND3Q9H8U3 227 aa15.87■□□□□ 0.13
TRIM4-202ENST00000354241 ARL2-SNX15V9GYD0 113 aa15.87■□□□□ 0.13
TRIM4-202ENST00000354241 ZNF343Q6P1L6 599 aa15.86■□□□□ 0.13
TRIM4-202ENST00000354241 ZNF418Q8TF45 676 aaPredicted RBP15.86■□□□□ 0.13
TRIM4-202ENST00000354241 BLNKQ8WV28 456 aa15.86■□□□□ 0.13
TRIM4-202ENST00000354241 RPUSD4Q96CM3 377 aaKnown RBP15.86■□□□□ 0.13
TRIM4-202ENST00000354241 SERTAD4Q9NUC0 356 aa15.86■□□□□ 0.13
TRIM4-202ENST00000354241 ZNF98A6NK75 572 aa15.86■□□□□ 0.13
TRIM4-202ENST00000354241 F6UZH7 168 aa15.86■□□□□ 0.13
TRIM4-202ENST00000354241 NDUFS6O75380 124 aaKnown RBP15.86■□□□□ 0.13
TRIM4-202ENST00000354241 SNAPINO95295 136 aa15.86■□□□□ 0.13
TRIM4-202ENST00000354241 ZNF674Q2M3X9 581 aa15.86■□□□□ 0.13
TRIM4-202ENST00000354241 OR5B12Q96R08 314 aa15.86■□□□□ 0.13
TRIM4-202ENST00000354241 CLDN34H7C241 214 aa15.85■□□□□ 0.13
TRIM4-202ENST00000354241 RPLP1P05386 114 aaKnown RBP15.85■□□□□ 0.13
TRIM4-202ENST00000354241 FOXE3Q13461 319 aa15.85■□□□□ 0.13
TRIM4-202ENST00000354241 Q6ZSV7 163 aa15.85■□□□□ 0.13
TRIM4-202ENST00000354241 NKX6-2Q9C056 277 aaPredicted RBP15.85■□□□□ 0.13
TRIM4-202ENST00000354241 OTOGQ6ZRI0 2925 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 A0A1W2PRE2 83 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 BPIFA4PQ86YQ2 179 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 TMEM14CQ9P0S9 112 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 SCO2A0A1W2PP80 73 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 ELANEP08246 267 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 NBEAP1P0C6P0 100 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 NPPCP23582 126 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 SMUG1Q53HV7 270 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 CLRN3Q8NCR9 226 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 NIPSNAP3BQ9BS92 247 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 C20orf24Q9BUV8 137 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 PARLQ9H300 379 aa15.84■□□□□ 0.13
TRIM4-202ENST00000354241 ZNF727A8MUV8 499 aa15.83■□□□□ 0.12
TRIM4-202ENST00000354241 GGTLC3B5MD39 225 aa15.83■□□□□ 0.12
TRIM4-202ENST00000354241 H3BQ15 152 aa15.83■□□□□ 0.12
TRIM4-202ENST00000354241 H3BTX0 84 aa15.83■□□□□ 0.12
TRIM4-202ENST00000354241 M0R036 132 aa15.83■□□□□ 0.12
TRIM4-202ENST00000354241 CRYBA1P05813 215 aa15.83■□□□□ 0.12
TRIM4-202ENST00000354241 FOSL1P15407 271 aa15.83■□□□□ 0.12
TRIM4-202ENST00000354241 SUMO1P63165 101 aaKnown RBP15.83■□□□□ 0.12
TRIM4-202ENST00000354241 SMIM7Q9BQ49 75 aa15.83■□□□□ 0.12
TRIM4-202ENST00000354241 HIVEP2P31629 2446 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms