RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ARMS2P0C7Q2 107 aa10.67□□□□□ -0.7
IFT88-202ENST00000351808 SRSF6Q13247 344 aaKnown RBP10.67□□□□□ -0.7
IFT88-202ENST00000351808 FAM169BQ8N8A8 192 aa10.67□□□□□ -0.7
IFT88-202ENST00000351808 IFI27L1Q96BM0 104 aa10.67□□□□□ -0.7
IFT88-202ENST00000351808 GFRA4Q9GZZ7 299 aa10.67□□□□□ -0.7
IFT88-202ENST00000351808 CEP192Q8TEP8 1941 aa10.67□□□□□ -0.7
IFT88-202ENST00000351808 TRBV25-1A0A075B6N4 114 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 COL8A1P27658 744 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 CFHR2P36980 270 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 RPL32P62910 135 aaKnown RBP10.66□□□□□ -0.7
IFT88-202ENST00000351808 ODF1Q14990 250 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 NFE4Q86UQ8 179 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 CXorf67Q86X51 503 aaPredicted RBP10.66□□□□□ -0.7
IFT88-202ENST00000351808 OR5AN1Q8NGI8 311 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 FXYD5Q96DB9 178 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 DNPH1O43598 174 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 MRPL33O75394 65 aaKnown RBP10.66□□□□□ -0.7
IFT88-202ENST00000351808 B3GALT5-AS1P59052 145 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 PLGLB1Q02325 96 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 C12orf74Q32Q52 190 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 C17orf82Q86X59 251 aaPredicted RBP10.66□□□□□ -0.7
IFT88-202ENST00000351808 OCIAD1Q9NX40 245 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 GNG12Q9UBI6 72 aa10.66□□□□□ -0.7
IFT88-202ENST00000351808 SPTBN5Q9NRC6 3674 aaKnown RBP10.66□□□□□ -0.7
IFT88-202ENST00000351808 A0A1B0GW15 77 aa10.65□□□□□ -0.7
IFT88-202ENST00000351808 COX7A2P2O60397 106 aa10.65□□□□□ -0.7
IFT88-202ENST00000351808 SSBP2P81877 361 aaPredicted RBP10.65□□□□□ -0.7
IFT88-202ENST00000351808 ZNF826PQ6ZT77 177 aa10.65□□□□□ -0.7
IFT88-202ENST00000351808 TMEM14BQ9NUH8 114 aa10.65□□□□□ -0.7
IFT88-202ENST00000351808 HIF1ANQ9NWT6 349 aa10.65□□□□□ -0.7
IFT88-202ENST00000351808 METRNQ9UJH8 293 aa10.65□□□□□ -0.7
IFT88-202ENST00000351808 TRIOO75962 3097 aa10.65□□□□□ -0.7
IFT88-202ENST00000351808 A0A1B0GUT8 65 aa10.65□□□□□ -0.7
IFT88-202ENST00000351808 CLEC3BP05452 202 aa10.65□□□□□ -0.7
IFT88-202ENST00000351808 Q71RC1 249 aaPredicted RBP10.65□□□□□ -0.7
IFT88-202ENST00000351808 AKIRIN1Q9H9L7 192 aaPredicted RBP10.65□□□□□ -0.7
IFT88-202ENST00000351808 FZR1Q9UM11 496 aa10.65□□□□□ -0.7
IFT88-202ENST00000351808 KLF12Q9Y4X4 402 aa10.65□□□□□ -0.7
IFT88-202ENST00000351808 MYCNOSP40205 109 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 C10orf113Q5VZT2 155 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 PATE2Q6UY27 113 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 C1orf229Q6ZS94 237 aaPredicted RBP10.64□□□□□ -0.71
IFT88-202ENST00000351808 LCNL1Q6ZST4 164 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 PDPNQ86YL7 162 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 CIARTQ8N365 385 aaPredicted RBP10.64□□□□□ -0.71
IFT88-202ENST00000351808 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 ZNF492Q9P255 531 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 A0A1W2PPC4 97 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 NPIPB5A8MRT5 1133 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 H3BTX0 84 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 OVOL3O00110 214 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 Q6AWC8 147 aa10.64□□□□□ -0.71
IFT88-202ENST00000351808 FOXA2Q9Y261 457 aaPredicted RBP10.64□□□□□ -0.71
IFT88-202ENST00000351808 SPINT2O43291 252 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 NDUFS7O75251 213 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 SMCPP49901 116 aaPredicted RBP10.63□□□□□ -0.71
IFT88-202ENST00000351808 PLP2Q04941 152 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 ALKBH6Q3KRA9 238 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 ZNF766Q5HY98 468 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 ZNF562Q6V9R5 426 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 PCSK5Q92824 1860 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 TRAV8-1A0A0A6YYK1 113 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 DUX1O43812 170 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 HBDP02042 147 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
IFT88-202ENST00000351808 ZNF134P52741 427 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 SRYQ05066 204 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 EDDM3AQ14507 147 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 TPPP3Q9BW30 176 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.63□□□□□ -0.71
IFT88-202ENST00000351808 D6R8Y8 96 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 J3KRW8 73 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 IGHV3-48P01763 117 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 NHLRC4P0CG21 123 aaPredicted RBP10.63□□□□□ -0.71
IFT88-202ENST00000351808 CT45A10P0DMU9 189 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 RRN3P1Q2M238 152 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 ZNF318Q5VUA4 2279 aa10.63□□□□□ -0.71
IFT88-202ENST00000351808 TRANK1O15050 2925 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 C15orf65H3BRN8 121 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 FCER1GP30273 86 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 ZFAND6Q6FIF0 208 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 PTH2Q96A98 100 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 ARFGEF3Q5TH69 2177 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 PCNX2A6NKB5 2137 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 RFPL3SP0C7P2 107 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 RIGQ13278 110 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 GTSCR1Q86UQ5 136 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 SMRP1Q8NCR6 262 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 SRSF12Q8WXF0 261 aaKnown RBP10.62□□□□□ -0.71
IFT88-202ENST00000351808 FLYWCH2Q96CP2 140 aaKnown RBP10.62□□□□□ -0.71
IFT88-202ENST00000351808 IFI27L2Q9H2X8 130 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 IGFLR1Q9H665 355 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 HHLA3Q9XRX5 114 aa10.62□□□□□ -0.71
IFT88-202ENST00000351808 C10orf142B7Z368 130 aa10.61□□□□□ -0.71
IFT88-202ENST00000351808 UTF1Q5T230 341 aa10.61□□□□□ -0.71
IFT88-202ENST00000351808 PRNDQ9UKY0 176 aa10.61□□□□□ -0.71
IFT88-202ENST00000351808 WI2-2373I1.2A0A1W2PRP0 233 aa10.61□□□□□ -0.71
IFT88-202ENST00000351808 SCRG1O75711 98 aa10.61□□□□□ -0.71
IFT88-202ENST00000351808 CD27P26842 260 aa10.61□□□□□ -0.71
IFT88-202ENST00000351808 CD69Q07108 199 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms