RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZNF71Q9NQZ8 489 aaPredicted RBP9.95□□□□□ -0.82
COL12A1-202ENST00000345356 CCL3L1P16619 93 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 C10orf55Q5SWW7 151 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 TRAV21A0A0B4J279 112 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 RBMY1BA6NDE4 496 aaKnown RBP9.94□□□□□ -0.82
COL12A1-202ENST00000345356 RBMY1EA6NEQ0 496 aaKnown RBP9.94□□□□□ -0.82
COL12A1-202ENST00000345356 RBMY1DP0C7P1 496 aaKnown RBP9.94□□□□□ -0.82
COL12A1-202ENST00000345356 RBMY1A1P0DJD3 496 aaKnown RBP9.94□□□□□ -0.82
COL12A1-202ENST00000345356 RBMY1CP0DJD4 496 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 LINC00205P59089 165 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 FAM106AQ4KMX7 169 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 DEFB125Q8N687 156 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 GREB1Q4ZG55 1949 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 A0A0U1RRA0 63 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 TOMM40O96008 361 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 ARMS2P0C7Q2 107 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 PPP1R27Q86WC6 154 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 GFRA4Q9GZZ7 299 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 COL5A3P25940 1745 aaPredicted RBP9.94□□□□□ -0.82
COL12A1-202ENST00000345356 ESPL1Q14674 2120 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 IGLV3-32A0A0A0MS00 114 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 TRBV6-6A0A0A6YYG2 114 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 PSPNO60542 156 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 MYOD1P15172 320 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 GLRXP35754 106 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 RHOGP84095 191 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 IL15RAQ13261 267 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 RALGAPA1Q6GYQ0 2036 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 CEP290O15078 2479 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 B5MCH6 92 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 VWC2Q2TAL6 325 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 ZIC4Q8N9L1 334 aa9.94□□□□□ -0.82
COL12A1-202ENST00000345356 K7ERJ3 54 aa9.93□□□□□ -0.82
COL12A1-202ENST00000345356 DEFB123Q8N688 67 aa9.93□□□□□ -0.82
COL12A1-202ENST00000345356 TMEM101Q96IK0 257 aa9.93□□□□□ -0.82
COL12A1-202ENST00000345356 SH2D1AO60880 128 aa9.93□□□□□ -0.82
COL12A1-202ENST00000345356 TMEM42Q69YG0 159 aa9.93□□□□□ -0.82
COL12A1-202ENST00000345356 SRSF8Q9BRL6 282 aaKnown RBP9.93□□□□□ -0.82
COL12A1-202ENST00000345356 ARHGEF17Q96PE2 2063 aaPredicted RBP9.93□□□□□ -0.82
COL12A1-202ENST00000345356 TMEM8BA6NDV4 472 aa9.93□□□□□ -0.82
COL12A1-202ENST00000345356 RRN3P1Q2M238 152 aa9.93□□□□□ -0.82
COL12A1-202ENST00000345356 SLC50A1Q9BRV3 221 aa9.93□□□□□ -0.82
COL12A1-202ENST00000345356 RALGAPA2Q2PPJ7 1873 aa9.93□□□□□ -0.82
COL12A1-202ENST00000345356 PAX1P15863 534 aa9.93□□□□□ -0.82
COL12A1-202ENST00000345356 SNRPD3P62318 126 aaKnown RBP9.93□□□□□ -0.82
COL12A1-202ENST00000345356 TRAV8-3A0A0A6YYJ7 113 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 GGTLC3B5MD39 225 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 PDLIM4P50479 330 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 C20orf204Q6ZNR8 217 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 NKX2-8O15522 239 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 NUPR1O60356 82 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 C1orf147Q96MC9 270 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-202ENST00000345356 PPP1R32Q7Z5V6 425 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 SPACA3Q8IXA5 215 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 SMIM27A0A1W2PRY6 76 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 CD28P10747 220 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 AMTNQ6UX39 209 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 CLEC19AQ6UXS0 136 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 DEFB124Q8NES8 71 aa9.92□□□□□ -0.82
COL12A1-202ENST00000345356 MRPS18CQ9Y3D5 142 aaKnown RBP9.92□□□□□ -0.82
COL12A1-202ENST00000345356 LRRK1Q38SD2 2015 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 IGKV1-6A0A0C4DH72 117 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 GAGE12JA6NER3 117 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 GAGE7O76087 117 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 GAGE12FP0CL80 117 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 GAGE12GP0CL81 117 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 GAGE12IP0CL82 117 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 IGHV1-2P23083 117 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 CFHR2P36980 270 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 GAGE4Q13068 117 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 TRIP6Q15654 476 aaKnown RBP9.91□□□□□ -0.82
COL12A1-202ENST00000345356 Q86TA4 180 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 TRBV20-1A0A075B6N2 111 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 VDAC2P45880 294 aaPredicted RBP9.91□□□□□ -0.82
COL12A1-202ENST00000345356 GAGE5Q13069 117 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 GAGE6Q13070 117 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 LOC102723996A0A087X1L8 192 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 DEFB104AQ8WTQ1 72 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 GLMPQ8WWB7 406 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 VGLL1Q99990 258 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 DPM3Q9P2X0 92 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 LINC01549A6NIU2 74 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 H3BMM0 161 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 CD7P09564 240 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 UBE2WQ96B02 151 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 ABHD17AQ96GS6 310 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 PYGO2Q9BRQ0 406 aa9.91□□□□□ -0.82
COL12A1-202ENST00000345356 TEX48A0A1B0GUV7 120 aa9.9□□□□□ -0.82
COL12A1-202ENST00000345356 E9PLN8 166 aa9.9□□□□□ -0.82
COL12A1-202ENST00000345356 SIPA1L1O43166 1804 aa9.9□□□□□ -0.82
COL12A1-202ENST00000345356 IL18BPO95998 194 aa9.9□□□□□ -0.82
COL12A1-202ENST00000345356 MLANAQ16655 118 aa9.9□□□□□ -0.82
COL12A1-202ENST00000345356 MAFAQ8NHW3 353 aaPredicted RBP9.9□□□□□ -0.82
COL12A1-202ENST00000345356 C1QTNF4Q9BXJ3 329 aa9.9□□□□□ -0.82
COL12A1-202ENST00000345356 TRGV3P03979 118 aa9.9□□□□□ -0.82
COL12A1-202ENST00000345356 A0A1W2PR77 199 aa9.9□□□□□ -0.82
COL12A1-202ENST00000345356 LGALS1P09382 135 aaKnown RBP9.9□□□□□ -0.82
COL12A1-202ENST00000345356 SP9P0CG40 484 aa9.9□□□□□ -0.82
COL12A1-202ENST00000345356 LGALS9BQ3B8N2 356 aa9.9□□□□□ -0.82
COL12A1-202ENST00000345356 LGALS9CQ6DKI2 356 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms