RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 KIR3DL3Q8N743 410 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 ZNF439Q8NDP4 499 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 OR4C13Q8NGP0 309 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 ADTRPQ96IZ2 230 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 TP53TG3Q9ULZ0 132 aa10.5□□□□□ -0.73
COL18A1-201ENST00000342220 FCN1O00602 326 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 TYMSP04818 313 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 ARL14EPLP0DKL9 152 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 VMA21Q3ZAQ7 101 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 MGST2Q99735 147 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 FBN2P35556 2912 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 PDE6DO43924 150 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 PMCHP20382 165 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 HSPE1P61604 102 aaKnown RBP10.49□□□□□ -0.73
COL18A1-201ENST00000342220 KLHDC1Q8N7A1 406 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 TMEM186Q96B77 213 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 ZC2HC1AQ96GY0 325 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 IGHV3OR16-8A0A075B7F1 116 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 TRAV40A0A0B4J280 105 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 BUB1B-PAK6H3BSN5 160 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 KCNIP2Q9NS61 270 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 KAAG1Q9UBP8 84 aa10.49□□□□□ -0.73
COL18A1-201ENST00000342220 TRBV20OR9-2A0A075B6H5 130 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 IGHV1-3A0A0C4DH29 117 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 RBFOX2O43251 390 aaKnown RBP eCLIP10.48□□□□□ -0.731e-7■■■■■ 30.8
COL18A1-201ENST00000342220 OR7C2O60412 319 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 VDAC2P45880 294 aaPredicted RBP10.48□□□□□ -0.73
COL18A1-201ENST00000342220 LINC00310P59036 64 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 DTX2Q86UW9 622 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 CUBNO60494 3623 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 IGHV3-23P01764 117 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 CBLN1P23435 193 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 DUX5Q96PT3 197 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 GGTLC1Q9BX51 225 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 DPM3Q9P2X0 92 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 SCO2A0A1W2PP80 73 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 CD99P14209 185 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 AMTP48728 403 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 PIMREGQ9BSJ6 248 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 TENM4Q6N022 2769 aa10.48□□□□□ -0.73
COL18A1-201ENST00000342220 ERHP84090 104 aaKnown RBP10.47□□□□□ -0.73
COL18A1-201ENST00000342220 SCGB2A2Q13296 93 aa10.47□□□□□ -0.73
COL18A1-201ENST00000342220 OR2T6Q8NHC8 308 aa10.47□□□□□ -0.73
COL18A1-201ENST00000342220 SGMS2Q8NHU3 365 aa10.47□□□□□ -0.73
COL18A1-201ENST00000342220 C7orf69Q9H7B7 122 aa10.47□□□□□ -0.73
COL18A1-201ENST00000342220 TBL2Q9Y4P3 447 aaKnown RBP10.47□□□□□ -0.73
COL18A1-201ENST00000342220 TEX50A0A1B0GTY4 177 aa10.47□□□□□ -0.73
COL18A1-201ENST00000342220 PRSS46E5RG02 174 aa10.47□□□□□ -0.73
COL18A1-201ENST00000342220 KIR2DS2P43631 304 aa10.47□□□□□ -0.73
COL18A1-201ENST00000342220 RHOGP84095 191 aa10.47□□□□□ -0.73
COL18A1-201ENST00000342220 OR4P4Q8NGL7 312 aa10.47□□□□□ -0.73
COL18A1-201ENST00000342220 OR1N2Q8NGR9 330 aa10.47□□□□□ -0.73
COL18A1-201ENST00000342220 C15orf61A6NNL5 157 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 RNF223E7ERA6 249 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 TGFAP01135 160 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 AREGP15514 252 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 SPATA31B1PQ5VZV4 182 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 TMEM144Q7Z5S9 345 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 FAM216AQ8WUB2 273 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 C1orf159Q96HA4 380 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 SFRP2Q96HF1 295 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 DSCAML1Q8TD84 2053 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 IGLC7A0M8Q6 106 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 MPDU1O75352 247 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 STAG3L2P0CL84 134 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 STAG3L3P0CL85 134 aa10.46□□□□□ -0.73
COL18A1-201ENST00000342220 MRPS16Q9Y3D3 137 aaKnown RBP10.46□□□□□ -0.73
COL18A1-201ENST00000342220 YTHDF2Q9Y5A9 579 aaKnown RBP10.46□□□□□ -0.73
COL18A1-201ENST00000342220 APCP25054 2843 aa10.46□□□□□ -0.74
COL18A1-201ENST00000342220 UPK2O00526 184 aa10.46□□□□□ -0.74
COL18A1-201ENST00000342220 CR1LQ2VPA4 569 aa10.46□□□□□ -0.74
COL18A1-201ENST00000342220 TMEM249Q2WGJ8 235 aa10.46□□□□□ -0.74
COL18A1-201ENST00000342220 PRSS57Q6UWY2 283 aa10.46□□□□□ -0.74
COL18A1-201ENST00000342220 Q8N976 141 aa10.46□□□□□ -0.74
COL18A1-201ENST00000342220 OR1L8Q8NGR8 309 aa10.46□□□□□ -0.74
COL18A1-201ENST00000342220 NRN1Q9NPD7 142 aa10.46□□□□□ -0.74
COL18A1-201ENST00000342220 TP73-AS1Q9UF72 201 aa10.46□□□□□ -0.74
COL18A1-201ENST00000342220 PRNDQ9UKY0 176 aa10.46□□□□□ -0.74
COL18A1-201ENST00000342220 MDFIC2A0A1B0GVS7 189 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 SRSF1Q07955 248 aaKnown RBP eCLIP10.45□□□□□ -0.742e-8■□□□□ 10.4
COL18A1-201ENST00000342220 ECSCRQ19T08 205 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 OCC1Q8TAD7 63 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 DDB2Q92466 427 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 CXorf1O96002 111 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 DYNAPQ8N1N2 210 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 ST6GALNAC6Q969X2 333 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 HIVEP2P31629 2446 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 A6NJY4 79 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 FAM90A9PA6NNJ1 464 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 TNFRSF13BO14836 293 aaPredicted RBP10.45□□□□□ -0.74
COL18A1-201ENST00000342220 MOSP00540 346 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 SAA4P35542 130 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 RPL27AP46776 148 aaKnown RBP10.45□□□□□ -0.74
COL18A1-201ENST00000342220 LGALS7P47929 136 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 MPV17L2Q567V2 206 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 FAM120AOSQ5T036 256 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 TMUB1Q9BVT8 246 aa10.45□□□□□ -0.74
COL18A1-201ENST00000342220 ZNF253O75346 499 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 FOXH1O75593 365 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 IGFBP2P18065 325 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms