RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 TMEM170BQ5T4T1 132 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 UNQ5815/PRO19632Q6UWF5 114 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 PFN4Q8NHR9 129 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 DUX3Q96PT4 197 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 RNF167Q9H6Y7 350 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 TRAV26-1A0A087WT03 109 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 CCL2P13500 99 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 TNXAQ16473 311 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 ST6GALNAC6Q969X2 333 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 PNRC2Q9NPJ4 139 aaKnown RBP2.75□□□□□ -1.97
CSMD3-202ENST00000339701 DPM3Q9P2X0 92 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 TRBV20OR9-2A0A075B6H5 130 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 TRGV2A0A075B6R0 118 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 IGHV3-64DA0A0J9YX35 117 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 HLA-DMBP28068 263 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 HERV-K104P63124 156 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 LDLRAD2Q5SZI1 272 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF562Q6V9R5 426 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF479Q96JC4 524 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 A0A0A6YYD4 124 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 F12P00748 615 aaPredicted RBP2.75□□□□□ -1.97
CSMD3-202ENST00000339701 NPSP0C0P6 89 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF32P17041 273 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 KIAA0040Q15053 153 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 ATP1A1-AS1Q5TC04 95 aa2.75□□□□□ -1.97
CSMD3-202ENST00000339701 AURKAIP1Q9NWT8 199 aaPredicted RBP2.75□□□□□ -1.97
CSMD3-202ENST00000339701 TRAV8-2A0A0B4J237 113 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 NPFFO15130 113 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 CRXO43186 299 aaPredicted RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF124Q15973 351 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 AMN1Q8IY45 258 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 C8orf31Q8N9H6 132 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 RASL10AQ92737 203 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 GPR146Q96CH1 333 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 CARD19Q96LW7 228 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 F11RQ9Y624 299 aaKnown RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 UBE2AP49459 152 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 ANXA2RQ3ZCQ2 193 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 PLA2G2CQ5R387 149 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 TRPT1Q86TN4 253 aaKnown RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 ZNRF1Q8ND25 227 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 OR5AN1Q8NGI8 311 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 CNRIP1Q96F85 164 aaPredicted RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 SLC25A22Q9H936 323 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 PKD1L2Q7Z442 2459 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 IGHV3OR16-10A0A075B7F0 116 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 CENPVL1A0A0U1RR11 272 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 TMEM50BP56557 158 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 Q0VG73 95 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 UBE2V1Q13404 147 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF585BQ52M93 769 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 FAM231DQ6ZW35 169 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 IFI27L1Q96BM0 104 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 VSIG2Q96IQ7 327 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 WFDC6Q9BQY6 131 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 RSPO3Q9BXY4 272 aaPredicted RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 JPT2Q9H910 190 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 SLC25A37Q9NYZ2 338 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 DSCAML1Q8TD84 2053 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 FUSP35637 526 aaKnown RBP eCLIP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 RPL36AP83881 106 aaKnown RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 PRSS57Q6UWY2 283 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 TEX45Q8NA69 505 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 RPL36ALQ969Q0 106 aaKnown RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 TMEM243Q9BU79 118 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 A4D1N5 150 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 F8VVB4 439 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 F8VWA3 439 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 TRGV3P03979 118 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 PTGER1P34995 402 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 LY6G5BQ8NDX9 201 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 IFI27L2Q9H2X8 130 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 SRP19P09132 144 aaKnown RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 GLI4P10075 376 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 C8orf82Q6P1X6 216 aaPredicted RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 ABHD12Q8N2K0 398 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 ANKRD29Q8N6D5 301 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 ATP6V0E2Q8NHE4 81 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF488Q96MN9 340 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 PRADC1Q9BSG0 188 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 MEX3AA1L020 520 aaKnown RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 PRSS47A8MTI9 375 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 GATA2P23769 480 aaPredicted RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 MRPS36P82909 103 aaKnown RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF880Q6PDB4 577 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 RPS27LQ71UM5 84 aaKnown RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 RPP21Q9H633 154 aaKnown RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 USP9XQ93008 2570 aaPredicted RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 UMODP07911 640 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 SCTP09683 121 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF660Q6AZW8 331 aaPredicted RBP2.74□□□□□ -1.97
CSMD3-202ENST00000339701 BRK1Q8WUW1 75 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 NABP2Q9BQ15 211 aa2.74□□□□□ -1.97
CSMD3-202ENST00000339701 TRBV7-1A0A0A6YYK4 115 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 NTF4P34130 210 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 LYZP61626 148 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 PAX2Q02962 417 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 PRSS8Q16651 343 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 BCDIN3DQ7Z5W3 292 aaKnown RBP2.73□□□□□ -1.97
CSMD3-202ENST00000339701 DMRTC2Q8IXT2 367 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms