RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ZNF491Q8N8L2 437 aa12.75□□□□□ -0.37
SCNN1A-202ENST00000338748 SGK494Q96LW2 274 aa12.75□□□□□ -0.37
SCNN1A-202ENST00000338748 V9GYV3 84 aa12.75□□□□□ -0.37
SCNN1A-202ENST00000338748 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.75□□□□□ -0.37
SCNN1A-202ENST00000338748 CSPG4Q6UVK1 2322 aa12.75□□□□□ -0.37
SCNN1A-202ENST00000338748 ISLRO14498 428 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 TYMSP04818 313 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 IGHV4-38-2P0DP08 117 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 HOXA5P20719 270 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 BRS3P32247 399 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 ERVFC1-1P60608 527 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 FOXL1Q12952 345 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 STXBP6Q8NFX7 210 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 CDC42EP3Q9UKI2 254 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 A1L4Q6 167 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 ATP6V0E1O15342 81 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 IL4P05112 153 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 ECSCRQ19T08 205 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 IMMP2LQ96T52 175 aa12.74□□□□□ -0.37
SCNN1A-202ENST00000338748 ZNF320A2RRD8 509 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 NDUFS8O00217 210 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 TGOLN2O43493 480 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 GNG7O60262 68 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 TOMM40O96008 361 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 MGST1P10620 155 aaKnown RBP12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 USF2Q15853 346 aaPredicted RBP12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 PDZD11Q5EBL8 140 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 RNF125Q96EQ8 232 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 ZNF586Q9NXT0 402 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 C1RLQ9NZP8 487 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 RPH3ALQ9UNE2 315 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 ZNF469Q96JG9 3925 aaPredicted RBP12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 IGHV1-69DA0A0B4J2H0 117 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 PGPA6NDG6 321 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 GCGP01275 180 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 IGHV1-69P01742 117 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 FRMD6-AS1P0C7T7 363 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 SMIM6P0DI80 62 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 PRB4P10163 310 aaPredicted RBP12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 ACTL10Q5JWF8 245 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 TMUB1Q9BVT8 246 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 C21orf62Q9NYP8 219 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 IL36BQ9NZH7 164 aa12.73□□□□□ -0.37
SCNN1A-202ENST00000338748 OR2T8A6NH00 312 aa12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 G3V318 75 aa12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 SLC25A5P05141 298 aaKnown RBP12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 Q56UQ5 140 aa12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 PIFOQ8TCI5 191 aa12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 EPDR1Q9UM22 224 aa12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 H3BRN7 92 aa12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 CNN1P51911 297 aaKnown RBP12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 MFAP4P55083 255 aa12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 C17orf77Q96MU5 243 aa12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 SHANK2-AS3Q9BTD1 123 aa12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 Q9H3A6 140 aa12.72□□□□□ -0.37
SCNN1A-202ENST00000338748 CDX1P47902 265 aaPredicted RBP12.71□□□□□ -0.37
SCNN1A-202ENST00000338748 C5orf56Q8N8D9 126 aa12.71□□□□□ -0.37
SCNN1A-202ENST00000338748 NIT2Q9NQR4 276 aa12.71□□□□□ -0.37
SCNN1A-202ENST00000338748 WI2-2373I1.2A0A1W2PRP0 233 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 CA1P00915 261 aaPredicted RBP12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 AMY1AP04745 511 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 HIST1H1BP16401 226 aaKnown RBP12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 TAS2R60P59551 318 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 UNQ5815/PRO19632Q6UWF5 114 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 EXOC3-AS1Q8N2X6 119 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 ZNF48Q96MX3 618 aaPredicted RBP12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 TCEAL7Q9BRU2 100 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 CHRDL1Q9BU40 450 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 GPR61Q9BZJ8 451 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 FBXL7Q9UJT9 491 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 Q71RC1 249 aaPredicted RBP12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 HIST3H2BBQ8N257 126 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 ZNF414Q96IQ9 312 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 TMEM14CQ9P0S9 112 aa12.7□□□□□ -0.38
SCNN1A-202ENST00000338748 IGHV3-35A0A0C4DH35 117 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 MSMBP08118 114 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 CTSGP08311 255 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 ADMP35318 185 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 YPEL3P61236 119 aaPredicted RBP12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 IBA57Q5T440 356 aaKnown RBP12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 BAGE2Q86Y30 109 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 OR8I2Q8N0Y5 310 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 FAM110DQ8TAY7 271 aaPredicted RBP12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 IGHV3OR16-8A0A075B7F1 116 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 MRPS12O15235 138 aaKnown RBP12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 AVPP01185 164 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 FABP1P07148 127 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 HIST1H1EP10412 219 aaKnown RBP12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 FCGR2BP31994 310 aaPredicted RBP12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 TCL1AP56279 114 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 TMEM183BQ1AE95 376 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 OSTCQ9NRP0 149 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 THYN1Q9P016 225 aa12.69□□□□□ -0.38
SCNN1A-202ENST00000338748 CHD6Q8TD26 2715 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 NAV2Q8IVL1 2488 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 IGLC2P0DOY2 106 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 RPEL1Q2QD12 228 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 C15orf32Q32M92 178 aa12.68□□□□□ -0.38
SCNN1A-202ENST00000338748 C5orf17Q8NAS9 161 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms