RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CRLF1O75462 422 aa11.4□□□□□ -0.59
CDK5RAP3-201ENST00000338399 ARL3P36405 182 aa11.4□□□□□ -0.59
CDK5RAP3-201ENST00000338399 TAS2R45P59539 299 aa11.4□□□□□ -0.59
CDK5RAP3-201ENST00000338399 USF2Q15853 346 aaPredicted RBP11.4□□□□□ -0.59
CDK5RAP3-201ENST00000338399 ZNF343Q6P1L6 599 aa11.4□□□□□ -0.59
CDK5RAP3-201ENST00000338399 KLHDC1Q8N7A1 406 aa11.4□□□□□ -0.59
CDK5RAP3-201ENST00000338399 OR5B12Q96R08 314 aa11.4□□□□□ -0.59
CDK5RAP3-201ENST00000338399 SLC25A2Q9BXI2 301 aa11.4□□□□□ -0.59
CDK5RAP3-201ENST00000338399 IGHV3OR16-8A0A075B7F1 116 aa11.39□□□□□ -0.59
CDK5RAP3-201ENST00000338399 OR7C2O60412 319 aa11.39□□□□□ -0.59
CDK5RAP3-201ENST00000338399 CD5P06127 495 aa11.39□□□□□ -0.59
CDK5RAP3-201ENST00000338399 KHDC3LQ587J8 217 aa11.39□□□□□ -0.59
CDK5RAP3-201ENST00000338399 OR5AU1Q8NGC0 362 aa11.39□□□□□ -0.59
CDK5RAP3-201ENST00000338399 FAM167A-AS1Q96KT0 104 aa11.39□□□□□ -0.59
CDK5RAP3-201ENST00000338399 SLC25A39Q9BZJ4 359 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-201ENST00000338399 FN1P02751 2386 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-201ENST00000338399 SETXQ7Z333 2677 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-201ENST00000338399 GCHFRP30047 84 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 PSMB3P49720 205 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 LEMD1Q68G75 181 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 TOMM20LQ6UXN7 152 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 ZNF503Q96F45 646 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 NARS2Q96I59 477 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 F8P00451 2351 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 LOC102723971A0A1B0GUV8 181 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 C9JQL5 133 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 IFNA1P01562 189 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 BCL2P10415 239 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 ZP3P21754 424 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 RELQ04864 619 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 PMS2P11Q13670 270 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 PEA15Q15121 130 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 ZNF506Q5JVG8 444 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 PQLC2Q6ZP29 291 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 RNF152Q8N8N0 203 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 RXFP4Q8TDU9 374 aa11.38□□□□□ -0.59
CDK5RAP3-201ENST00000338399 NSD1Q96L73 2696 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-201ENST00000338399 TCF21O43680 179 aa11.37□□□□□ -0.59
CDK5RAP3-201ENST00000338399 OR10J4P0C629 311 aa11.37□□□□□ -0.59
CDK5RAP3-201ENST00000338399 ICAM4Q14773 271 aa11.37□□□□□ -0.59
CDK5RAP3-201ENST00000338399 MYOZ3Q8TDC0 251 aa11.37□□□□□ -0.59
CDK5RAP3-201ENST00000338399 C16orf95Q9H693 158 aa11.37□□□□□ -0.59
CDK5RAP3-201ENST00000338399 ZFAND3Q9H8U3 227 aa11.37□□□□□ -0.59
CDK5RAP3-201ENST00000338399 PAGE4O60829 102 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 PYYP10082 97 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 UBE2G2P60604 165 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 SRSF2Q01130 221 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 SHANK2-AS3Q9BTD1 123 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 OR51M1Q9H341 326 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 MANBALQ9NQG1 85 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 PEF1Q9UBV8 284 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 H3BRN7 92 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 BMPR1BO00238 502 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 PPT1P50897 306 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 LINC01006Q8NI28 216 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 UBE2E2Q96LR5 201 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 LINC00052Q96N35 136 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 PAXXQ9BUH6 204 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 TMEM167BQ9NRX6 74 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 RABAC1Q9UI14 185 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 VAX2Q9UIW0 290 aa11.36□□□□□ -0.59
CDK5RAP3-201ENST00000338399 TMEM218A2RU14 115 aa11.35□□□□□ -0.59
CDK5RAP3-201ENST00000338399 FAM209BQ5JX69 171 aa11.35□□□□□ -0.59
CDK5RAP3-201ENST00000338399 NF1P21359 2839 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 ZNF98A6NK75 572 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 GGCTO75223 188 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 SNRPCP09234 159 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 UBE2L3P68036 154 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 TCTEX1D4Q5JR98 221 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 S100A7AQ86SG5 101 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 C20orf24Q9BUV8 137 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 CLPSL1A2RUU4 121 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 NDUFA4O00483 81 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 ZNF207O43670 478 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 NDUFA7O95182 113 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 LGALS1P09382 135 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 SFTA3P0C7M3 94 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 CST9LP1Q5W188 147 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 STXBP6Q8NFX7 210 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 WIPF2Q8TF74 440 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 FXYD5Q96DB9 178 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 SMDT1Q9H4I9 107 aa11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 YTHDF2Q9Y5A9 579 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-201ENST00000338399 KRBOX1C9JBD0 128 aa11.33□□□□□ -0.6
CDK5RAP3-201ENST00000338399 HSPB1P04792 205 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-201ENST00000338399 SRP19P09132 144 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-201ENST00000338399 GP9P14770 177 aa11.33□□□□□ -0.6
CDK5RAP3-201ENST00000338399 ATF4P18848 351 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-201ENST00000338399 TAGLN2P37802 199 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-201ENST00000338399 MEF2BQ02080 365 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-201ENST00000338399 HIST2H2BDQ6DRA6 164 aa11.33□□□□□ -0.6
CDK5RAP3-201ENST00000338399 UNQ9165/PRO28630Q6UXU0 137 aa11.33□□□□□ -0.6
CDK5RAP3-201ENST00000338399 C18orf65Q6ZTR6 163 aa11.33□□□□□ -0.6
CDK5RAP3-201ENST00000338399 FAM74A7A6NL05 159 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 HAX1O00165 279 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 ATP5G3P48201 142 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 CD81P60033 236 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 KHDC1LQ5JSQ8 128 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 OR4F5Q8NH21 305 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 232 ms