RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 THAP8Q8NA92 274 aa7□□□□□ -1.29
SNCA-201ENST00000336904 OR1L4Q8NGR5 311 aa7□□□□□ -1.29
SNCA-201ENST00000336904 CFHR4Q92496 578 aa7□□□□□ -1.29
SNCA-201ENST00000336904 PERPQ96FX8 193 aa7□□□□□ -1.29
SNCA-201ENST00000336904 Q9H3A6 140 aa7□□□□□ -1.29
SNCA-201ENST00000336904 USP24Q9UPU5 2620 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 A0A1W2PRE2 83 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 C9JCJ5 164 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 FNDC10F2Z333 226 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 I3L2K1 104 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 K7EIM0 57 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 NDUFS6O75380 124 aaKnown RBP6.99□□□□□ -1.29
SNCA-201ENST00000336904 TYMSP04818 313 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 CRISP2P16562 243 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 PMCHP20382 165 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 FCGR2BP31994 310 aaPredicted RBP6.99□□□□□ -1.29
SNCA-201ENST00000336904 FAM71F2Q6NXP2 309 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 GOLT1AQ6ZVE7 132 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 FBN2P35556 2912 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 PRB1P04280 392 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 RNF224P0DH78 156 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 CD99P14209 185 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 SLAQ13239 276 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 BRD3OSQ6XYD6 125 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 PRNTQ86SH4 94 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 GBGT1Q8N5D6 347 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 C8orf31Q8N9H6 132 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 NUDT10Q8NFP7 164 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 TNFRSF14Q92956 283 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 NUDT11Q96G61 164 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 MS4A10Q96PG2 267 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 TPPP3Q9BW30 176 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 MRPL32Q9BYC8 188 aaKnown RBP6.99□□□□□ -1.29
SNCA-201ENST00000336904 SLC25A39Q9BZJ4 359 aaPredicted RBP6.99□□□□□ -1.29
SNCA-201ENST00000336904 ZNF586Q9NXT0 402 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 HIGD1AQ9Y241 93 aa6.99□□□□□ -1.29
SNCA-201ENST00000336904 TIMM8BQ9Y5J9 83 aaPredicted RBP6.99□□□□□ -1.29
SNCA-201ENST00000336904 VWC2LB2RUY7 222 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 GP9P14770 177 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 HOXB4P17483 251 aaPredicted RBP6.98□□□□□ -1.29
SNCA-201ENST00000336904 SRIP30626 198 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 Q56UQ5 140 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 GDF5OSQ5U4N7 250 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 TMEM116Q8NCL8 245 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 LY6G5BQ8NDX9 201 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 BTF3L4Q96K17 158 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 HSPB9Q9BQS6 159 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 TXNDC17Q9BRA2 123 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 CHODLQ9H9P2 273 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 GNB4Q9HAV0 340 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 ZNF705FA8MVS1 300 aaPredicted RBP6.98□□□□□ -1.29
SNCA-201ENST00000336904 ZNF207O43670 478 aaKnown RBP6.98□□□□□ -1.29
SNCA-201ENST00000336904 GCGP01275 180 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 CRYGCP07315 174 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 ZNF705DP0CH99 300 aaPredicted RBP6.98□□□□□ -1.29
SNCA-201ENST00000336904 ZNF705BP0CI00 300 aaPredicted RBP6.98□□□□□ -1.29
SNCA-201ENST00000336904 ZNF664Q8N3J9 261 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 OR2D3Q8NGH3 330 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 CMTM2Q8TAZ6 248 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 ITLN2Q8WWU7 325 aaPredicted RBP6.98□□□□□ -1.29
SNCA-201ENST00000336904 EPDR1Q9UM22 224 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 PTPN13Q12923 2485 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 TMSB15BA0A087X1C1 80 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 G3V318 75 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 AMY1AP04745 511 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 TMEM11P17152 192 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 NTF3P20783 257 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 FOXA3P55318 350 aaPredicted RBP6.98□□□□□ -1.29
SNCA-201ENST00000336904 USF2Q15853 346 aaPredicted RBP6.98□□□□□ -1.29
SNCA-201ENST00000336904 OR5R1Q8NH85 324 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 TMEM68Q96MH6 324 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 NOL4LQ96MY1 436 aaPredicted RBP6.98□□□□□ -1.29
SNCA-201ENST00000336904 TMUB1Q9BVT8 246 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 SAMD10Q9BYL1 202 aa6.98□□□□□ -1.29
SNCA-201ENST00000336904 HIGD1CA8MV81 97 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 TGOLN2O43493 480 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 GATCO43716 136 aaKnown RBP6.97□□□□□ -1.29
SNCA-201ENST00000336904 GNG7O60262 68 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 NDUFB8O95169 186 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 HLA-DMBP28068 263 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 SELENOTP62341 195 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 PMCHL1Q16048 86 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 C5orf64Q2M2E5 130 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 ETFRF1Q6IPR1 90 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 SSX8Q7RTT4 187 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 TMEM18Q96B42 140 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 PGLYRP4Q96LB8 373 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 NEU1Q99519 415 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 TRGV9Q99603 122 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 DOPEY1Q5JWR5 2465 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 PRTN3P24158 256 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 SAA4P35542 130 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 TMEM136Q6ZRR5 245 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 Q6ZWC4 215 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 ATOH7Q8N100 152 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 NUP35Q8NFH5 326 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 CDC42EP3Q9UKI2 254 aa6.97□□□□□ -1.29
SNCA-201ENST00000336904 JOSD1Q15040 202 aaPredicted RBP6.96□□□□□ -1.29
SNCA-201ENST00000336904 TOMM20LQ6UXN7 152 aa6.96□□□□□ -1.29
SNCA-201ENST00000336904 C8orf46Q8TAG6 207 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms