RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 MSRB2Q9Y3D2 182 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 TRGV11A0A075B6L2 103 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 KNCNA6PVL3 124 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 IGKCP01834 107 aa8.74□□□□□ -1.01
CLN8-201ENST00000331222 C15orf61A6NNL5 157 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 HOXD3P31249 432 aaPredicted RBP8.73□□□□□ -1.01
CLN8-201ENST00000331222 ZNF497Q6ZNH5 498 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 CTHRC1Q96CG8 243 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 A8MXK9 166 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 SYNJ2BPP57105 145 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 TNS1Q9HBL0 1735 aaKnown RBP8.73□□□□□ -1.01
CLN8-201ENST00000331222 PCP4P48539 62 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 ITGB1BP1O14713 200 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 FOXG1P55316 489 aaPredicted RBP8.73□□□□□ -1.01
CLN8-201ENST00000331222 ZNRD1Q9P1U0 126 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 ZNF319Q9P2F9 582 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 PLNP26678 52 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 CFHR1Q03591 330 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 PKDREJQ9NTG1 2253 aa8.73□□□□□ -1.01
CLN8-201ENST00000331222 SRSF3P84103 164 aaKnown RBP8.73□□□□□ -1.01
CLN8-201ENST00000331222 CA7P43166 264 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 PRR30Q53SZ7 412 aaPredicted RBP8.72□□□□□ -1.01
CLN8-201ENST00000331222 BPESC1Q9GZL8 116 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 USF3Q68DE3 2245 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 F8WEM9 126 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 CEACAM8P31997 349 aaPredicted RBP8.72□□□□□ -1.01
CLN8-201ENST00000331222 LRRC37AA6NMS7 1700 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 UCP3P55916 312 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 SP5Q6BEB4 398 aaPredicted RBP8.72□□□□□ -1.01
CLN8-201ENST00000331222 PAQR4Q8N4S7 273 aaPredicted RBP8.72□□□□□ -1.01
CLN8-201ENST00000331222 MED13LQ71F56 2210 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 GREM1O60565 184 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 SPATA31B1PQ5VZV4 182 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 ORAOV1Q8WV07 137 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 SPXQ9BT56 116 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 ERVH48-1M5A8F1 160 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 XCL2Q9UBD3 114 aa8.72□□□□□ -1.01
CLN8-201ENST00000331222 DKK1O94907 266 aa8.71□□□□□ -1.01
CLN8-201ENST00000331222 LAGE3Q14657 143 aa8.71□□□□□ -1.01
CLN8-201ENST00000331222 FNDC1Q4ZHG4 1894 aaPredicted RBP8.71□□□□□ -1.01
CLN8-201ENST00000331222 WISP3O95389 354 aaPredicted RBP8.71□□□□□ -1.01
CLN8-201ENST00000331222 TMEM30BQ3MIR4 351 aa8.71□□□□□ -1.01
CLN8-201ENST00000331222 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.71□□□□□ -1.01
CLN8-201ENST00000331222 WBP1Q96G27 269 aa8.71□□□□□ -1.01
CLN8-201ENST00000331222 NPDC1Q9NQX5 325 aaPredicted RBP8.71□□□□□ -1.01
CLN8-201ENST00000331222 FRMPD3Q5JV73 1810 aa8.71□□□□□ -1.01
CLN8-201ENST00000331222 COL8A2P25067 703 aa8.71□□□□□ -1.01
CLN8-201ENST00000331222 NRN1Q9NPD7 142 aa8.71□□□□□ -1.01
CLN8-201ENST00000331222 D6R8Y8 96 aa8.71□□□□□ -1.02
CLN8-201ENST00000331222 C14orf178Q8N769 122 aaPredicted RBP8.71□□□□□ -1.02
CLN8-201ENST00000331222 TRAV25A0A0B4J276 109 aa8.71□□□□□ -1.02
CLN8-201ENST00000331222 A6NNC1 897 aa8.71□□□□□ -1.02
CLN8-201ENST00000331222 RPL23P62829 140 aaKnown RBP8.71□□□□□ -1.02
CLN8-201ENST00000331222 SPSB3Q6PJ21 355 aa8.71□□□□□ -1.02
CLN8-201ENST00000331222 ANAPC13Q9BS18 74 aa8.71□□□□□ -1.02
CLN8-201ENST00000331222 VSIRQ9H7M9 311 aa8.71□□□□□ -1.02
CLN8-201ENST00000331222 TRAV3A0A0B4J244 114 aa8.71□□□□□ -1.02
CLN8-201ENST00000331222 LYPD2Q6UXB3 125 aa8.71□□□□□ -1.02
CLN8-201ENST00000331222 CACNG8Q8WXS5 425 aa8.71□□□□□ -1.02
CLN8-201ENST00000331222 ANAPC10Q9UM13 185 aa8.71□□□□□ -1.02
CLN8-201ENST00000331222 NRXN2Q9P2S2 1712 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 TRAV8-3A0A0A6YYJ7 113 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 YPEL1O60688 119 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 EFNB3Q15768 340 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 YPEL2Q96QA6 119 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 NDUFS5O43920 106 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 CSTL1Q9H114 145 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 RFNGQ9Y644 331 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 OCIAD2Q56VL3 154 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 SLC50A1Q9BRV3 221 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 TM2D1Q9BX74 207 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 PSG1P11464 419 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 IGHV1-3A0A0C4DH29 117 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 E9PLN8 166 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 ESDP10768 282 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 OCC1Q8TAD7 63 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 KLK9Q9UKQ9 250 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 ERG28Q9UKR5 140 aa8.7□□□□□ -1.02
CLN8-201ENST00000331222 VWC2LB2RUY7 222 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 PSMG3Q9BT73 122 aaPredicted RBP8.69□□□□□ -1.02
CLN8-201ENST00000331222 IGHV3-38A0A0C4DH36 116 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 IGLV2-23P01705 113 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 SRP19P09132 144 aaKnown RBP8.69□□□□□ -1.02
CLN8-201ENST00000331222 ATP5L2Q7Z4Y8 100 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 C18orf12Q96KH6 178 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 EIF4EBP2Q13542 120 aaPredicted RBP8.69□□□□□ -1.02
CLN8-201ENST00000331222 A0A0A6YYD4 124 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 TRAV8-1A0A0A6YYK1 113 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 PFN2P35080 140 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 PVRIGQ6DKI7 326 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 PRB2P02812 416 aaPredicted RBP8.69□□□□□ -1.02
CLN8-201ENST00000331222 RPL36AP83881 106 aaKnown RBP8.69□□□□□ -1.02
CLN8-201ENST00000331222 BMPERQ8N8U9 685 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 DEFB105AQ8NG35 78 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 RPL36ALQ969Q0 106 aaKnown RBP8.69□□□□□ -1.02
CLN8-201ENST00000331222 MS4A6AQ9H2W1 248 aa8.69□□□□□ -1.02
CLN8-201ENST00000331222 ZNF138P52744 262 aa8.68□□□□□ -1.02
CLN8-201ENST00000331222 NHLRC3Q5JS37 347 aa8.68□□□□□ -1.02
CLN8-201ENST00000331222 TEX43Q6ZNM6 134 aa8.68□□□□□ -1.02
CLN8-201ENST00000331222 THAP8Q8NA92 274 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms