RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 SMIM12Q96EX1 92 aa11.62□□□□□ -0.55
SNX20-202ENST00000330943 PERPQ96FX8 193 aa11.62□□□□□ -0.55
SNX20-202ENST00000330943 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
SNX20-202ENST00000330943 ZGRF1Q86YA3 2104 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 TRAV8-6A0A0B4J262 113 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 C19orf71A6NCJ1 209 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 CGB1A6NKQ9 187 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 SNAI2O43623 268 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 IGHG3P01860 377 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 HIST1H1AQ02539 215 aaPredicted RBP11.61□□□□□ -0.55
SNX20-202ENST00000330943 FLYWCH2Q96CP2 140 aaKnown RBP11.61□□□□□ -0.55
SNX20-202ENST00000330943 ZC2HC1AQ96GY0 325 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 SLC25A15Q9Y619 301 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 ZNF318Q5VUA4 2279 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 COL6A6A6NMZ7 2263 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 OR5AL1P0C617 328 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 CT83Q5H943 113 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 ZNF833PQ6ZTB9 187 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 THAP8Q8NA92 274 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 FAM222BQ8WU58 562 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 H1FXQ92522 213 aaKnown RBP11.61□□□□□ -0.55
SNX20-202ENST00000330943 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
SNX20-202ENST00000330943 CD5LO43866 347 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 LTAP01374 205 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 WT1P19544 449 aaPredicted RBP11.6□□□□□ -0.55
SNX20-202ENST00000330943 SUB1P53999 127 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNX20-202ENST00000330943 RUSC1-AS1Q66K80 236 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 STXBP6Q8NFX7 210 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 FMC1Q96HJ9 113 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 PLSCR4Q9NRQ2 329 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 PROCRQ9UNN8 238 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 DYSFO75923 2080 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 GAGE12BA1L429 117 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 PRR33A8MZF0 331 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 HLA-DRB1P01911 266 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 GPR183P32249 361 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 FOXE3Q13461 319 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 C5orf17Q8NAS9 161 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 NDFIP1Q9BT67 221 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 HSPB8Q9UJY1 196 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 AKAP6Q13023 2319 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 ABCA4P78363 2273 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 PLXNB1O43157 2135 aa11.6□□□□□ -0.55
SNX20-202ENST00000330943 TRAV8-1A0A0A6YYK1 113 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 C22orf46C9J442 243 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 COL8A1P27658 744 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 ARF6P62330 175 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 MS4A6AQ9H2W1 248 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 ZNF492Q9P255 531 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 TCRAP04437 139 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 HTR1DP28221 377 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 TNFAIP6P98066 277 aaPredicted RBP11.59□□□□□ -0.55
SNX20-202ENST00000330943 Q9H3A6 140 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 LINC00574Q9H8X3 128 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.59□□□□□ -0.55
SNX20-202ENST00000330943 TM4SF5O14894 197 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 S100A7P31151 101 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 ZNF788Q6ZQV5 615 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 TMEM167AQ8TBQ9 72 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 GFRA4Q9GZZ7 299 aa11.59□□□□□ -0.55
SNX20-202ENST00000330943 PEF1Q9UBV8 284 aaKnown RBP11.59□□□□□ -0.55
SNX20-202ENST00000330943 IGHV3-21A0A0B4J1V1 117 aa11.58□□□□□ -0.56
SNX20-202ENST00000330943 hADV38S2A0JD32 116 aa11.58□□□□□ -0.56
SNX20-202ENST00000330943 INS-IGF2F8WCM5 200 aa11.58□□□□□ -0.56
SNX20-202ENST00000330943 FAM87AP0C7U9 286 aa11.58□□□□□ -0.56
SNX20-202ENST00000330943 DIAPH2-AS1Q14236 149 aa11.58□□□□□ -0.56
SNX20-202ENST00000330943 HCP5Q6MZN7 132 aa11.58□□□□□ -0.56
SNX20-202ENST00000330943 Q71RC1 249 aaPredicted RBP11.58□□□□□ -0.56
SNX20-202ENST00000330943 CIARTQ8N365 385 aaPredicted RBP11.58□□□□□ -0.56
SNX20-202ENST00000330943 C7orf71A4D174 169 aa11.58□□□□□ -0.56
SNX20-202ENST00000330943 CCL3L1P16619 93 aa11.58□□□□□ -0.56
SNX20-202ENST00000330943 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
SNX20-202ENST00000330943 LINC01545Q5VT33 79 aa11.58□□□□□ -0.56
SNX20-202ENST00000330943 ZCCHC24Q8N2G6 241 aaKnown RBP11.58□□□□□ -0.56
SNX20-202ENST00000330943 OR5AN1Q8NGI8 311 aa11.58□□□□□ -0.56
SNX20-202ENST00000330943 GLRXP35754 106 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 C2orf91Q6ZV80 131 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 BPIFA4PQ86YQ2 179 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 TEX45Q8NA69 505 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 OR4C13Q8NGP0 309 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 TPSG1Q9NRR2 321 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 A0A1W2PPI3 338 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 PPIAL4DF5H284 164 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 K7ERU9 68 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 APELAP0DMC3 54 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 COX8AP10176 69 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 GP9P14770 177 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 GATA4P43694 442 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 TMEM30BQ3MIR4 351 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 FAM71F2Q6NXP2 309 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 VSTM2AQ8TAG5 236 aa11.57□□□□□ -0.56
SNX20-202ENST00000330943 SLC25A17O43808 307 aa11.56□□□□□ -0.56
SNX20-202ENST00000330943 APOHP02749 345 aaPredicted RBP11.56□□□□□ -0.56
SNX20-202ENST00000330943 UQCRFS1P47985 274 aa11.56□□□□□ -0.56
SNX20-202ENST00000330943 NEU4Q8WWR8 484 aaPredicted RBP11.56□□□□□ -0.56
SNX20-202ENST00000330943 SARAFQ96BY9 339 aa11.56□□□□□ -0.56
SNX20-202ENST00000330943 AP5S1Q9NUS5 200 aa11.56□□□□□ -0.56
SNX20-202ENST00000330943 DKK4Q9UBT3 224 aa11.56□□□□□ -0.56
SNX20-202ENST00000330943 LINC00312Q9Y6C7 94 aa11.56□□□□□ -0.56
SNX20-202ENST00000330943 SPTBN1Q01082 2364 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms