RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 L7N2F9 121 aa20.28■□□□□ 0.84
ATPAF1-201ENST00000329231 PTTG1O95997 202 aa20.28■□□□□ 0.84
ATPAF1-201ENST00000329231 VAMP2P63027 116 aa20.28■□□□□ 0.84
ATPAF1-201ENST00000329231 IL15RAQ13261 267 aa20.28■□□□□ 0.84
ATPAF1-201ENST00000329231 A0A0J9YWU9 116 aa20.27■□□□□ 0.84
ATPAF1-201ENST00000329231 SMCO3A2RU48 225 aa20.27■□□□□ 0.84
ATPAF1-201ENST00000329231 PMS2P5A8MQ11 134 aa20.27■□□□□ 0.84
ATPAF1-201ENST00000329231 CA1P00915 261 aaPredicted RBP20.27■□□□□ 0.84
ATPAF1-201ENST00000329231 PSMG4Q5JS54 123 aa20.27■□□□□ 0.84
ATPAF1-201ENST00000329231 BPIFCQ8NFQ6 507 aa20.27■□□□□ 0.84
ATPAF1-201ENST00000329231 GOSR2O14653 212 aa20.26■□□□□ 0.83
ATPAF1-201ENST00000329231 METTL15P1P0C7V9 234 aa20.26■□□□□ 0.83
ATPAF1-201ENST00000329231 TRPT1Q86TN4 253 aaKnown RBP20.26■□□□□ 0.83
ATPAF1-201ENST00000329231 SLC45A2Q9UMX9 530 aa20.26■□□□□ 0.83
ATPAF1-201ENST00000329231 KNCNA6PVL3 124 aa20.25■□□□□ 0.83
ATPAF1-201ENST00000329231 DLK1P80370 383 aa20.25■□□□□ 0.83
ATPAF1-201ENST00000329231 ACTL10Q5JWF8 245 aa20.25■□□□□ 0.83
ATPAF1-201ENST00000329231 OR10P1Q8NGE3 313 aa20.25■□□□□ 0.83
ATPAF1-201ENST00000329231 PVALBP20472 110 aaPredicted RBP20.24■□□□□ 0.83
ATPAF1-201ENST00000329231 S100A7P31151 101 aa20.24■□□□□ 0.83
ATPAF1-201ENST00000329231 S100A10P60903 97 aa20.24■□□□□ 0.83
ATPAF1-201ENST00000329231 MORN3Q6PF18 240 aaPredicted RBP20.24■□□□□ 0.83
ATPAF1-201ENST00000329231 OR8I2Q8N0Y5 310 aa20.24■□□□□ 0.83
ATPAF1-201ENST00000329231 RARRES2Q99969 163 aa20.24■□□□□ 0.83
ATPAF1-201ENST00000329231 C11orf1Q9H5F2 150 aa20.24■□□□□ 0.83
ATPAF1-201ENST00000329231 FNDC10F2Z333 226 aa20.23■□□□□ 0.83
ATPAF1-201ENST00000329231 SSNA1O43805 119 aa20.23■□□□□ 0.83
ATPAF1-201ENST00000329231 CCNKO75909 580 aa20.23■□□□□ 0.83
ATPAF1-201ENST00000329231 SIX6O95475 246 aa20.23■□□□□ 0.83
ATPAF1-201ENST00000329231 SPP1P10451 314 aa20.23■□□□□ 0.83
ATPAF1-201ENST00000329231 RRAS2P62070 204 aaPredicted RBP20.23■□□□□ 0.83
ATPAF1-201ENST00000329231 RAB32Q13637 225 aa20.23■□□□□ 0.83
ATPAF1-201ENST00000329231 TMEM41BQ5BJD5 291 aa20.23■□□□□ 0.83
ATPAF1-201ENST00000329231 TMEM217Q8N7C4 229 aa20.23■□□□□ 0.83
ATPAF1-201ENST00000329231 MGAT4CQ9UBM8 478 aa20.23■□□□□ 0.83
ATPAF1-201ENST00000329231 ORM2P19652 201 aa20.22■□□□□ 0.83
ATPAF1-201ENST00000329231 GATA2P23769 480 aaPredicted RBP20.22■□□□□ 0.83
ATPAF1-201ENST00000329231 TMEM182Q6ZP80 229 aaPredicted RBP20.22■□□□□ 0.83
ATPAF1-201ENST00000329231 CYP2G1PQ6ZSU1 146 aa20.22■□□□□ 0.83
ATPAF1-201ENST00000329231 TMEM147Q9BVK8 224 aa20.22■□□□□ 0.83
ATPAF1-201ENST00000329231 NPVFQ9HCQ7 196 aa20.22■□□□□ 0.83
ATPAF1-201ENST00000329231 ATF4P18848 351 aaPredicted RBP20.21■□□□□ 0.83
ATPAF1-201ENST00000329231 ID1P41134 155 aa20.21■□□□□ 0.83
ATPAF1-201ENST00000329231 BCAP31P51572 246 aa20.21■□□□□ 0.83
ATPAF1-201ENST00000329231 OR1B1Q8NGR6 318 aa20.21■□□□□ 0.83
ATPAF1-201ENST00000329231 OR11H2Q8NH07 326 aa20.21■□□□□ 0.83
ATPAF1-201ENST00000329231 NMES1Q9C002 83 aa20.21■□□□□ 0.83
ATPAF1-201ENST00000329231 CAV2P51636 162 aa20.2■□□□□ 0.82
ATPAF1-201ENST00000329231 SELENOTP62341 195 aa20.2■□□□□ 0.82
ATPAF1-201ENST00000329231 CYCSP99999 105 aaKnown RBP20.2■□□□□ 0.82
ATPAF1-201ENST00000329231 ZNF98A6NK75 572 aa20.19■□□□□ 0.82
ATPAF1-201ENST00000329231 GALR1P47211 349 aa20.19■□□□□ 0.82
ATPAF1-201ENST00000329231 GGACTQ9BVM4 153 aa20.19■□□□□ 0.82
ATPAF1-201ENST00000329231 SLC25A22Q9H936 323 aa20.19■□□□□ 0.82
ATPAF1-201ENST00000329231 PSMB3P49720 205 aa20.18■□□□□ 0.82
ATPAF1-201ENST00000329231 ARL16Q0P5N6 197 aa20.18■□□□□ 0.82
ATPAF1-201ENST00000329231 SAMD13Q5VXD3 122 aa20.18■□□□□ 0.82
ATPAF1-201ENST00000329231 TEPPQ6URK8 271 aa20.18■□□□□ 0.82
ATPAF1-201ENST00000329231 LYRM2Q9NU23 88 aaPredicted RBP20.18■□□□□ 0.82
ATPAF1-201ENST00000329231 STARD9Q9P2P6 4700 aa20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 AGRNO00468 2067 aa20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 LCE6AA0A183 80 aa20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 FAM24AA6NFZ4 105 aa20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 DEDDO75618 318 aa20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 GIG44P09565 113 aaPredicted RBP20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 H2BFSP57053 126 aa20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 EWSR1Q01844 656 aaKnown RBP eCLIP20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 LINC00052Q96N35 136 aa20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 GPR82Q96P67 336 aa20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 ALG5Q9Y673 324 aa20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 CSMD3Q7Z407 3707 aa20.17■□□□□ 0.82
ATPAF1-201ENST00000329231 LINC00869P0C866 280 aa20.16■□□□□ 0.82
ATPAF1-201ENST00000329231 MEOX2P50222 304 aa20.16■□□□□ 0.82
ATPAF1-201ENST00000329231 RAP2BP61225 183 aa20.16■□□□□ 0.82
ATPAF1-201ENST00000329231 NUTF2P61970 127 aaKnown RBP20.16■□□□□ 0.82
ATPAF1-201ENST00000329231 SLC25A32Q9H2D1 315 aa20.16■□□□□ 0.82
ATPAF1-201ENST00000329231 CXorf65A6NEN9 183 aa20.15■□□□□ 0.82
ATPAF1-201ENST00000329231 H3BMM0 161 aa20.15■□□□□ 0.82
ATPAF1-201ENST00000329231 ISLRO14498 428 aa20.15■□□□□ 0.82
ATPAF1-201ENST00000329231 SOCS3O14543 225 aa20.15■□□□□ 0.82
ATPAF1-201ENST00000329231 HYPMO75409 117 aa20.15■□□□□ 0.82
ATPAF1-201ENST00000329231 RLN2P04090 185 aa20.15■□□□□ 0.82
ATPAF1-201ENST00000329231 C4BPBP20851 252 aa20.15■□□□□ 0.82
ATPAF1-201ENST00000329231 PLP1P60201 277 aa20.15■□□□□ 0.82
ATPAF1-201ENST00000329231 S100A7AQ86SG5 101 aa20.15■□□□□ 0.82
ATPAF1-201ENST00000329231 DOK5Q9P104 306 aa20.15■□□□□ 0.82
ATPAF1-201ENST00000329231 HIGD1AQ9Y241 93 aa20.15■□□□□ 0.82
ATPAF1-201ENST00000329231 CST7O76096 145 aa20.14■□□□□ 0.81
ATPAF1-201ENST00000329231 HLA-DRB4P13762 266 aa20.14■□□□□ 0.81
ATPAF1-201ENST00000329231 SULT1A1P50225 295 aa20.14■□□□□ 0.81
ATPAF1-201ENST00000329231 SLC38A11Q08AI6 406 aa20.14■□□□□ 0.81
ATPAF1-201ENST00000329231 TMEM252Q8N6L7 170 aa20.14■□□□□ 0.81
ATPAF1-201ENST00000329231 SLC25A39Q9BZJ4 359 aaPredicted RBP20.14■□□□□ 0.81
ATPAF1-201ENST00000329231 C11orf68Q9H3H3 251 aaKnown RBP20.14■□□□□ 0.81
ATPAF1-201ENST00000329231 HLA-DRB4X5D2U9 266 aa20.14■□□□□ 0.81
ATPAF1-201ENST00000329231 PMS2P11Q13670 270 aa20.13■□□□□ 0.81
ATPAF1-201ENST00000329231 RGS21Q2M5E4 152 aa20.13■□□□□ 0.81
ATPAF1-201ENST00000329231 STX12Q86Y82 276 aa20.13■□□□□ 0.81
ATPAF1-201ENST00000329231 SHANK2-AS3Q9BTD1 123 aa20.13■□□□□ 0.81
ATPAF1-201ENST00000329231 RSG1Q9BU20 258 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms