RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ZNF816Q0VGE8 651 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-201ENST00000328923 MIR17HGQ75NE6 70 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 HSD17B10Q99714 261 aaKnown RBP9.61□□□□□ -0.87
SHMT2-201ENST00000328923 FOXB1Q99853 325 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 CHAC1Q9BUX1 264 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 FGF23Q9GZV9 251 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-201ENST00000328923 PCSK5Q92824 1860 aa9.61□□□□□ -0.87
SHMT2-201ENST00000328923 LINC01548A6NM66 108 aa9.6□□□□□ -0.87
SHMT2-201ENST00000328923 MEIG1Q5JSS6 88 aa9.6□□□□□ -0.87
SHMT2-201ENST00000328923 UBALD1Q8TB05 177 aa9.6□□□□□ -0.87
SHMT2-201ENST00000328923 HEYLQ9NQ87 328 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-201ENST00000328923 THBDP07204 575 aa9.6□□□□□ -0.87
SHMT2-201ENST00000328923 CACNG7P62955 275 aa9.6□□□□□ -0.87
SHMT2-201ENST00000328923 ATP5L2Q7Z4Y8 100 aa9.6□□□□□ -0.87
SHMT2-201ENST00000328923 NGBQ9NPG2 151 aa9.6□□□□□ -0.87
SHMT2-201ENST00000328923 TRAV24A0A0B4J272 114 aa9.59□□□□□ -0.87
SHMT2-201ENST00000328923 MPDU1O75352 247 aa9.59□□□□□ -0.87
SHMT2-201ENST00000328923 LIFP15018 202 aa9.59□□□□□ -0.87
SHMT2-201ENST00000328923 DEFB126Q9BYW3 111 aa9.59□□□□□ -0.87
SHMT2-201ENST00000328923 OCIAD1Q9NX40 245 aa9.59□□□□□ -0.87
SHMT2-201ENST00000328923 USF3Q68DE3 2245 aa9.59□□□□□ -0.87
SHMT2-201ENST00000328923 A0A0J9YW62 118 aa9.59□□□□□ -0.87
SHMT2-201ENST00000328923 APOHP02749 345 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-201ENST00000328923 CFAP126Q5VTH2 177 aa9.59□□□□□ -0.87
SHMT2-201ENST00000328923 ABHD12Q8N2K0 398 aa9.59□□□□□ -0.87
SHMT2-201ENST00000328923 TPRP12270 2363 aaKnown RBP9.59□□□□□ -0.87
SHMT2-201ENST00000328923 ZIC3O60481 467 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 PATE4P0C8F1 98 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 IFITM1P13164 125 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 GAGE2BQ13066 116 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 GAGE2EQ4V326 116 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 CEND1Q8N111 149 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 DRAM1Q8N682 238 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 SRXN1Q9BYN0 137 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 RAB9BQ9NP90 201 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 GAGE2DQ9UEU5 116 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 SMIM9A6NGZ8 99 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 WISP2O76076 250 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 ERVK11-1P61568 191 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 TTC32Q5I0X7 151 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 MAP1LC3AQ9H492 121 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 AP5S1Q9NUS5 200 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 DLL3Q9NYJ7 618 aa9.58□□□□□ -0.88
SHMT2-201ENST00000328923 FCN3O75636 299 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 TGFAP01135 160 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 FAM106CPP0CH98 169 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 MEOX1P50221 254 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 SRSF1Q07955 248 aaKnown RBP eCLIP9.57□□□□□ -0.88
SHMT2-201ENST00000328923 C12orf74Q32Q52 190 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 FAM106AQ4KMX7 169 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 AAED1Q7RTV5 226 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 FGFBP3Q8TAT2 258 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 C1orf159Q96HA4 380 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 EML6Q6ZMW3 1958 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 IGKV2D-26A0A0A0MRZ7 120 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 TMEM8BA6NDV4 472 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 WIPF1O43516 503 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 GLRXP35754 106 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 RRN3P1Q2M238 152 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 LGALS9BQ3B8N2 356 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 LGALS9CQ6DKI2 356 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 FAM231DQ6ZW35 169 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 PGLYRP4Q96LB8 373 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 TCF19Q9Y242 345 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 EPG5Q9HCE0 2579 aa9.57□□□□□ -0.88
SHMT2-201ENST00000328923 TRAV4A0A0B4J268 109 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 LOC107984640A0A0U1RRK4 108 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 NTN3O00634 580 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-201ENST00000328923 SS18L1O75177 396 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-201ENST00000328923 ACP1P24666 158 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 IL11RAQ14626 422 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 PPDPFLQ8WWR9 84 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 ZNF503Q96F45 646 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 SPRY4Q9C004 299 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 AGRNO00468 2067 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 CACNA1BQ00975 2339 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 EVI2AP22794 236 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 LOXL1Q08397 574 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-201ENST00000328923 ZNF497Q6ZNH5 498 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 ZNF808Q8N4W9 903 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-201ENST00000328923 PLEKHA3Q9HB20 300 aa9.56□□□□□ -0.88
SHMT2-201ENST00000328923 A0A096LNJ9 63 aa9.55□□□□□ -0.88
SHMT2-201ENST00000328923 CRLF1O75462 422 aa9.55□□□□□ -0.88
SHMT2-201ENST00000328923 CA6P23280 308 aa9.55□□□□□ -0.88
SHMT2-201ENST00000328923 EIF4EBP1Q13541 118 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-201ENST00000328923 MRPL14Q6P1L8 145 aaKnown RBP9.55□□□□□ -0.88
SHMT2-201ENST00000328923 WDR31Q8NA23 367 aa9.55□□□□□ -0.88
SHMT2-201ENST00000328923 HIGD1BQ9P298 99 aa9.55□□□□□ -0.88
SHMT2-201ENST00000328923 PRRC2CQ9Y520 2896 aaKnown RBP9.55□□□□□ -0.88
SHMT2-201ENST00000328923 FXYD7P58549 80 aa9.55□□□□□ -0.88
SHMT2-201ENST00000328923 RPL30P62888 115 aaKnown RBP9.55□□□□□ -0.88
SHMT2-201ENST00000328923 LPAL2Q16609 132 aa9.55□□□□□ -0.88
SHMT2-201ENST00000328923 Q6P435 159 aa9.55□□□□□ -0.88
SHMT2-201ENST00000328923 PROK2Q9HC23 129 aa9.55□□□□□ -0.88
SHMT2-201ENST00000328923 TMEM167BQ9NRX6 74 aa9.55□□□□□ -0.88
SHMT2-201ENST00000328923 SOX21Q9Y651 276 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-201ENST00000328923 ACACBO00763 2458 aa9.55□□□□□ -0.88
SHMT2-201ENST00000328923 LOC400499M0QZD8 3231 aa9.54□□□□□ -0.88
SHMT2-201ENST00000328923 TRBV25-1A0A075B6N4 114 aa9.54□□□□□ -0.88
SHMT2-201ENST00000328923 ZNF688P0C7X2 276 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms