RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 SRSF2Q01130 221 aaKnown RBP10.53□□□□□ -0.72
LIN28A-202ENST00000326279 RNASEKQ6P5S7 137 aaKnown RBP10.53□□□□□ -0.72
LIN28A-202ENST00000326279 IGHV4-59P01825 116 aa10.53□□□□□ -0.72
LIN28A-202ENST00000326279 DSCR9P59020 149 aa10.53□□□□□ -0.72
LIN28A-202ENST00000326279 SCRT1Q9BWW7 348 aa10.53□□□□□ -0.72
LIN28A-202ENST00000326279 IGHV1-69DA0A0B4J2H0 117 aa10.53□□□□□ -0.72
LIN28A-202ENST00000326279 IGHV1-69P01742 117 aa10.53□□□□□ -0.72
LIN28A-202ENST00000326279 ATP5G2Q06055 141 aa10.53□□□□□ -0.72
LIN28A-202ENST00000326279 ASPHD1Q5U4P2 390 aa10.53□□□□□ -0.72
LIN28A-202ENST00000326279 SMIM15Q7Z3B0 74 aa10.53□□□□□ -0.72
LIN28A-202ENST00000326279 BMPR1BO00238 502 aa10.52□□□□□ -0.72
LIN28A-202ENST00000326279 ITGB1BP1O14713 200 aa10.52□□□□□ -0.72
LIN28A-202ENST00000326279 OR5R1Q8NH85 324 aa10.52□□□□□ -0.72
LIN28A-202ENST00000326279 TSTD3H0UI37 97 aa10.52□□□□□ -0.73
LIN28A-202ENST00000326279 TGOLN2O43493 480 aa10.52□□□□□ -0.73
LIN28A-202ENST00000326279 S100A8P05109 93 aa10.52□□□□□ -0.73
LIN28A-202ENST00000326279 CXCL1P09341 107 aa10.52□□□□□ -0.73
LIN28A-202ENST00000326279 AMTP48728 403 aa10.52□□□□□ -0.73
LIN28A-202ENST00000326279 COMPP49747 757 aaPredicted RBP10.52□□□□□ -0.73
LIN28A-202ENST00000326279 TCF23Q7RTU1 214 aa10.52□□□□□ -0.73
LIN28A-202ENST00000326279 BCL6BQ8N143 479 aaPredicted RBP10.52□□□□□ -0.73
LIN28A-202ENST00000326279 OR1P1Q8NH06 330 aa10.52□□□□□ -0.73
LIN28A-202ENST00000326279 ZNF418Q8TF45 676 aaPredicted RBP10.52□□□□□ -0.73
LIN28A-202ENST00000326279 NDUFA4L2Q9NRX3 87 aa10.52□□□□□ -0.73
LIN28A-202ENST00000326279 E7EUB6 86 aa10.52□□□□□ -0.73
LIN28A-202ENST00000326279 C15orf32Q32M92 178 aa10.52□□□□□ -0.73
LIN28A-202ENST00000326279 IGFL4Q6B9Z1 124 aa10.52□□□□□ -0.73
LIN28A-202ENST00000326279 YTHDF2Q9Y5A9 579 aaKnown RBP10.52□□□□□ -0.73
LIN28A-202ENST00000326279 MAST4O15021 2626 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 UBE2E1P51965 193 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 BLCAPP62952 87 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 DEFB112Q30KQ8 113 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 EXOC3-AS1Q8N2X6 119 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 Q8N7P7 452 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 PGLYRP4Q96LB8 373 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 TXNDC17Q9BRA2 123 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 PMS2P5A8MQ11 134 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 NDUFS8O00217 210 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 HIST1H1EP10412 219 aaKnown RBP10.51□□□□□ -0.73
LIN28A-202ENST00000326279 PLA2G2AP14555 144 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 C19orf24Q9BVV8 132 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 MRPL32Q9BYC8 188 aaKnown RBP10.51□□□□□ -0.73
LIN28A-202ENST00000326279 COLCA2A8K830 154 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 RPL15P61313 204 aaKnown RBP10.51□□□□□ -0.73
LIN28A-202ENST00000326279 C1QL4Q86Z23 238 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 WFDC12Q8WWY7 111 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 RNF125Q96EQ8 232 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 C16orf92Q96LL3 132 aa10.51□□□□□ -0.73
LIN28A-202ENST00000326279 TRAV8-1A0A0A6YYK1 113 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 SSBP2P81877 361 aaPredicted RBP10.5□□□□□ -0.73
LIN28A-202ENST00000326279 METTL26Q96S19 204 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 PEX7O00628 323 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 MEOX2P50222 304 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 FAM90A2PQ658T7 463 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 C5orf17Q8NAS9 161 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 FNDC4Q9H6D8 234 aaPredicted RBP10.5□□□□□ -0.73
LIN28A-202ENST00000326279 TRAV1-1A0A0B4J248 108 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 ATP6V0E1O15342 81 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 ARL3P36405 182 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 LMO4P61968 165 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 NDPQ00604 133 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 ODF3L1Q8IXM7 274 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 GRAMD2BQ96HH9 432 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 SPOCK3Q9BQ16 436 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 Q9H3A6 140 aa10.5□□□□□ -0.73
LIN28A-202ENST00000326279 F11RQ9Y624 299 aaKnown RBP10.5□□□□□ -0.73
LIN28A-202ENST00000326279 SETXQ7Z333 2677 aaKnown RBP10.5□□□□□ -0.73
LIN28A-202ENST00000326279 CENPVL3A0A0U1RRI6 287 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 SEC14L6B5MCN3 397 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 NPPCP23582 126 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 NSUN5P1Q3KNT7 163 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 PACRGQ96M98 296 aaPredicted RBP10.49□□□□□ -0.73
LIN28A-202ENST00000326279 NPFFR1Q9GZQ6 430 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 ZFHX4Q86UP3 3567 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 ELOBQ15370 118 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 ZNF705AQ6ZN79 300 aaPredicted RBP10.49□□□□□ -0.73
LIN28A-202ENST00000326279 DYNLRB2Q8TF09 96 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 NCOR1P1Q9H4R4 102 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 UFC1Q9Y3C8 167 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 TRAV20A0A0B4J274 112 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 GGCTO75223 188 aaKnown RBP10.49□□□□□ -0.73
LIN28A-202ENST00000326279 RPL7P18124 248 aaKnown RBP10.49□□□□□ -0.73
LIN28A-202ENST00000326279 C1orf122Q6ZSJ8 110 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 TRAV30A0A087WSZ9 112 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 HOXA3O43365 443 aaPredicted RBP10.49□□□□□ -0.73
LIN28A-202ENST00000326279 DLX6P56179 175 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 TOMM20LQ6UXN7 152 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 DUX3Q96PT4 197 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 RNF24Q9Y225 148 aa10.49□□□□□ -0.73
LIN28A-202ENST00000326279 LOC105371267A0A1B0GV96 52 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 HOXB4P17483 251 aaPredicted RBP10.48□□□□□ -0.73
LIN28A-202ENST00000326279 FOXA3P55318 350 aaPredicted RBP10.48□□□□□ -0.73
LIN28A-202ENST00000326279 BEND2Q8NDZ0 799 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 OR4B1Q8NGF8 309 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 NEU1Q99519 415 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 NACAE9PAV3 2078 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 TRAV41A0A0B4J266 112 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 ZNF98A6NK75 572 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 ZNF600Q6ZNG1 722 aa10.48□□□□□ -0.73
LIN28A-202ENST00000326279 TBX15Q96SF7 602 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms