RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 RNF5Q99942 180 aa15.87■□□□□ 0.13
SOX2-201ENST00000325404 SRSF8Q9BRL6 282 aaKnown RBP15.87■□□□□ 0.13
SOX2-201ENST00000325404 HSBP1O75506 76 aa15.87■□□□□ 0.13
SOX2-201ENST00000325404 PLAUP00749 431 aa15.87■□□□□ 0.13
SOX2-201ENST00000325404 TNXAQ16473 311 aa15.87■□□□□ 0.13
SOX2-201ENST00000325404 PRR27Q6MZM9 219 aa15.87■□□□□ 0.13
SOX2-201ENST00000325404 TRBV6-1A0A0K0K1D8 114 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 TCRAP04437 139 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 HBBP68871 147 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 COL5A1-AS1Q5SY13 56 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 CYB5R2Q6BCY4 276 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 FAM19A2Q8N3H0 131 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 BLNKQ8WV28 456 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 PRORYQ9H606 182 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 RALYQ9UKM9 306 aaKnown RBP15.86■□□□□ 0.13
SOX2-201ENST00000325404 IGHV2-26A0A0B4J1V2 119 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 IGHV1-69-2A0A0G2JMI3 117 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 FAM90A27PA6NNH2 459 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 E7EQL1 145 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 RUSC1-AS1Q66K80 236 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 OR8B3Q8NGG8 313 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 OR8B2Q96RD0 313 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 OTORQ9NRC9 128 aa15.86■□□□□ 0.13
SOX2-201ENST00000325404 VWC2LB2RUY7 222 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 DLEU1O43261 78 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 DMRTA1Q5VZB9 504 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 TMEM208Q9BTX3 173 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 CLEC7AQ9BXN2 247 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 HIGD1AQ9Y241 93 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 ROS1P08922 2347 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 FAM181BA6NEQ2 426 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 NTF3P20783 257 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 FBXL19-AS1Q494R0 122 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 Q9H3A6 140 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 LPAR2Q9HBW0 351 aa15.85■□□□□ 0.13
SOX2-201ENST00000325404 IGHV1-3A0A0C4DH29 117 aa15.84■□□□□ 0.13
SOX2-201ENST00000325404 B9A039 149 aa15.84■□□□□ 0.13
SOX2-201ENST00000325404 TEX22C9J3V5 150 aa15.84■□□□□ 0.13
SOX2-201ENST00000325404 P01737 135 aa15.84■□□□□ 0.13
SOX2-201ENST00000325404 G0S2P27469 103 aa15.84■□□□□ 0.13
SOX2-201ENST00000325404 APOBEC3AP31941 199 aaPredicted RBP15.84■□□□□ 0.13
SOX2-201ENST00000325404 PPP1R27Q86WC6 154 aa15.84■□□□□ 0.13
SOX2-201ENST00000325404 INSIG2Q9Y5U4 225 aa15.84■□□□□ 0.13
SOX2-201ENST00000325404 NPIPB6E9PJ23 425 aa15.84■□□□□ 0.13
SOX2-201ENST00000325404 BUB1B-PAK6H3BSN5 160 aa15.84■□□□□ 0.13
SOX2-201ENST00000325404 NBASA2RRP1 2371 aa15.83■□□□□ 0.13
SOX2-201ENST00000325404 M0R2Z0 102 aa15.83■□□□□ 0.12
SOX2-201ENST00000325404 C1RLQ9NZP8 487 aa15.83■□□□□ 0.12
SOX2-201ENST00000325404 NAV3Q8IVL0 2385 aa15.83■□□□□ 0.12
SOX2-201ENST00000325404 IGHV3-72A0A0B4J1Y9 119 aa15.83■□□□□ 0.12
SOX2-201ENST00000325404 LY6DQ14210 128 aa15.83■□□□□ 0.12
SOX2-201ENST00000325404 RNF24Q9Y225 148 aa15.83■□□□□ 0.12
SOX2-201ENST00000325404 CACNA1AO00555 2505 aa15.82■□□□□ 0.12
SOX2-201ENST00000325404 IGLC1P0CG04 106 aa15.82■□□□□ 0.12
SOX2-201ENST00000325404 HOXB4P17483 251 aaPredicted RBP15.82■□□□□ 0.12
SOX2-201ENST00000325404 CAMPP49913 170 aa15.82■□□□□ 0.12
SOX2-201ENST00000325404 RBPMS2Q6ZRY4 209 aaKnown RBP15.82■□□□□ 0.12
SOX2-201ENST00000325404 CHCHD1Q96BP2 118 aaKnown RBP15.82■□□□□ 0.12
SOX2-201ENST00000325404 ANKRD39Q53RE8 183 aa15.82■□□□□ 0.12
SOX2-201ENST00000325404 ASPHD1Q5U4P2 390 aa15.82■□□□□ 0.12
SOX2-201ENST00000325404 LINC00322Q6ZN03 302 aaPredicted RBP15.82■□□□□ 0.12
SOX2-201ENST00000325404 DAZAP1Q96EP5 407 aaKnown RBP15.82■□□□□ 0.12
SOX2-201ENST00000325404 C2orf70A6NJV1 201 aa15.81■□□□□ 0.12
SOX2-201ENST00000325404 CD3EP07766 207 aa15.81■□□□□ 0.12
SOX2-201ENST00000325404 C16orf54Q6UWD8 224 aa15.81■□□□□ 0.12
SOX2-201ENST00000325404 SSBP4Q9BWG4 385 aaPredicted RBP15.81■□□□□ 0.12
SOX2-201ENST00000325404 MRPS16Q9Y3D3 137 aaKnown RBP15.81■□□□□ 0.12
SOX2-201ENST00000325404 TRAV9-2A0A087WT02 112 aa15.81■□□□□ 0.12
SOX2-201ENST00000325404 I3L2K1 104 aa15.81■□□□□ 0.12
SOX2-201ENST00000325404 CNTFRP26992 372 aa15.81■□□□□ 0.12
SOX2-201ENST00000325404 TCF24Q7RTU0 167 aa15.81■□□□□ 0.12
SOX2-201ENST00000325404 GTSF1Q8WW33 167 aa15.81■□□□□ 0.12
SOX2-201ENST00000325404 TXN2Q99757 166 aa15.81■□□□□ 0.12
SOX2-201ENST00000325404 GOLT1BQ9Y3E0 138 aa15.81■□□□□ 0.12
SOX2-201ENST00000325404 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.8■□□□□ 0.12
SOX2-201ENST00000325404 LINC00614P0C842 121 aa15.8■□□□□ 0.12
SOX2-201ENST00000325404 ADORA2A-AS1P86434 159 aa15.8■□□□□ 0.12
SOX2-201ENST00000325404 EBLN2Q6P2I7 272 aa15.8■□□□□ 0.12
SOX2-201ENST00000325404 LINC01560Q8TB33 94 aa15.8■□□□□ 0.12
SOX2-201ENST00000325404 PSG1P11464 419 aa15.79■□□□□ 0.12
SOX2-201ENST00000325404 GPR6P46095 362 aaPredicted RBP15.79■□□□□ 0.12
SOX2-201ENST00000325404 HNRNPA3P51991 378 aaKnown RBP15.79■□□□□ 0.12
SOX2-201ENST00000325404 FOXA3P55318 350 aaPredicted RBP15.79■□□□□ 0.12
SOX2-201ENST00000325404 C21orf62-AS1Q17RA5 79 aa15.79■□□□□ 0.12
SOX2-201ENST00000325404 RNASEKQ6P5S7 137 aaKnown RBP15.79■□□□□ 0.12
SOX2-201ENST00000325404 Q6ZN92 141 aa15.79■□□□□ 0.12
SOX2-201ENST00000325404 Q86TA4 180 aa15.79■□□□□ 0.12
SOX2-201ENST00000325404 NDFIP1Q9BT67 221 aa15.79■□□□□ 0.12
SOX2-201ENST00000325404 SLC25A39Q9BZJ4 359 aaPredicted RBP15.79■□□□□ 0.12
SOX2-201ENST00000325404 ADGRG4Q8IZF6 3080 aa15.79■□□□□ 0.12
SOX2-201ENST00000325404 CRXO43186 299 aaPredicted RBP15.79■□□□□ 0.12
SOX2-201ENST00000325404 OR2D3Q8NGH3 330 aa15.79■□□□□ 0.12
SOX2-201ENST00000325404 SPOCK3Q9BQ16 436 aa15.79■□□□□ 0.12
SOX2-201ENST00000325404 WNT10AQ9GZT5 417 aa15.79■□□□□ 0.12
SOX2-201ENST00000325404 LY6LH3BQJ8 138 aa15.78■□□□□ 0.12
SOX2-201ENST00000325404 SRSF12Q8WXF0 261 aaKnown RBP15.78■□□□□ 0.12
SOX2-201ENST00000325404 URB1-AS1Q96HZ7 61 aa15.78■□□□□ 0.12
SOX2-201ENST00000325404 ZFP30Q9Y2G7 519 aa15.78■□□□□ 0.12
SOX2-201ENST00000325404 LAMTOR2Q9Y2Q5 125 aa15.78■□□□□ 0.12
SOX2-201ENST00000325404 TPRP12270 2363 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms