RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CELA3AP09093 270 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 CCL8P80075 99 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 C10orf105Q8TEF2 133 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 PILRBQ9UKJ0 227 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 HRKO00198 91 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 AGFG2O95081 481 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 IGHV3-13P01766 116 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 IGHV3-7P01780 117 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 SNHG12Q9BXW3 62 aa8.16□□□□□ -1.1
COL12A1-201ENST00000322507 GTSCR1Q86UQ5 136 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 TMEM219Q86XT9 240 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 CCL13Q99616 98 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 SLC50A1Q9BRV3 221 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 FAM208BQ5VWN6 2430 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 A0A0U1RQV1 116 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 hADV29S1A0JD25 119 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 TCRAP04437 139 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 FAM74A4Q5TZK3 123 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 ZNF664Q8N3J9 261 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 THBDP07204 575 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 CCL4P13236 92 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 JMJD8Q96S16 334 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 FABP5P3A8MUU1 101 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 TGIF1Q15583 401 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 C16orf47Q6ZP98 133 aaPredicted RBP8.15□□□□□ -1.1
COL12A1-201ENST00000322507 FBLN5Q9UBX5 448 aa8.15□□□□□ -1.1
COL12A1-201ENST00000322507 SHISA9B4DS77 424 aa8.15□□□□□ -1.11
COL12A1-201ENST00000322507 C1QL1O75973 258 aa8.15□□□□□ -1.11
COL12A1-201ENST00000322507 IGKV1D-16P01601 117 aa8.15□□□□□ -1.11
COL12A1-201ENST00000322507 SRSF2Q01130 221 aaKnown RBP8.15□□□□□ -1.11
COL12A1-201ENST00000322507 UNC119Q13432 240 aa8.15□□□□□ -1.11
COL12A1-201ENST00000322507 IGHV2-70DA0A0C4DH43 119 aa8.15□□□□□ -1.11
COL12A1-201ENST00000322507 IGFBP6P24592 240 aaPredicted RBP8.15□□□□□ -1.11
COL12A1-201ENST00000322507 C11orf44Q8N8P7 122 aa8.15□□□□□ -1.11
COL12A1-201ENST00000322507 ZIC4Q8N9L1 334 aa8.15□□□□□ -1.11
COL12A1-201ENST00000322507 IGHV3OR15-7A0A075B7D8 119 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 FAM236AA0A1B0GUQ0 79 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 FAM236BA0A1B0GV22 79 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 COLCA2A8K830 154 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 WNT2P09544 360 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 SMIM10L1P0DMW3 83 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 SMIM10Q96HG1 83 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 SLC25A53Q5H9E4 307 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 OR13A1Q8NGR1 328 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 NUP210Q8TEM1 1887 aaPredicted RBP8.14□□□□□ -1.11
COL12A1-201ENST00000322507 FHL5Q5TD97 284 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 UQCRQO14949 82 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 RASL10AQ92737 203 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 EAF1Q96JC9 268 aaPredicted RBP8.14□□□□□ -1.11
COL12A1-201ENST00000322507 TRAV24A0A0B4J272 114 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 IFI27L2Q9H2X8 130 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 MPZP25189 248 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 DPH3Q96FX2 82 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 LINC00312Q9Y6C7 94 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 C9orf172C9J069 976 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 WDR82Q6UXN9 313 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 CCL19Q99731 98 aa8.14□□□□□ -1.11
COL12A1-201ENST00000322507 TOMM7Q9P0U1 55 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 SIGLEC8Q9NYZ4 499 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 AGMATQ9BSE5 352 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 CD28P10747 220 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 MYF5P13349 255 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 REG1BP48304 166 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 ITLN1Q8WWA0 313 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 PTPRQQ9UMZ3 2332 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 M0R381 172 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 COX6A1P12074 109 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 VSIG2Q96IQ7 327 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 PAX4O43316 350 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 C1QTNF5Q9BXJ0 243 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 UBE2AP49459 152 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 H2BFSP57053 126 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 ICAM4Q14773 271 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 STPG1Q5TH74 334 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 RPP25Q9BUL9 199 aaKnown RBP8.13□□□□□ -1.11
COL12A1-201ENST00000322507 DPM3Q9P2X0 92 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 MRPL23Q16540 153 aaKnown RBP8.13□□□□□ -1.11
COL12A1-201ENST00000322507 LINC01551Q86U37 167 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 HAPLN4Q86UW8 402 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 NBEAP1P0C6P0 100 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 CCL20P78556 96 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 ACP7Q6ZNF0 438 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 SLC25A38Q96DW6 304 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 DENND4CQ5VZ89 1909 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 DCTN5Q9BTE1 182 aa8.13□□□□□ -1.11
COL12A1-201ENST00000322507 IGKV3-11P04433 115 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 PVRIGQ6DKI7 326 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 TMEM74BQ9NUR3 256 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 ZPLD1Q8TCW7 415 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 SAP25Q8TEE9 199 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 PRR13Q9NZ81 148 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 STPG4Q8N801 248 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 CRLF1O75462 422 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 LINC00158P58513 81 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 RPL23P62829 140 aaKnown RBP8.12□□□□□ -1.11
COL12A1-201ENST00000322507 HCP5Q6MZN7 132 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 SLC22A18ASQ8N1D0 253 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 PSMB8P28062 276 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 TRAV13-2A0A0B4J235 113 aa8.12□□□□□ -1.11
COL12A1-201ENST00000322507 TRAV1-1A0A0B4J248 108 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms