RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CT83Q5H943 113 aa14.04□□□□□ -0.16
SMCHD1-201ENST00000320876 NLRC5Q86WI3 1866 aa14.04□□□□□ -0.16
SMCHD1-201ENST00000320876 PAX4O43316 350 aa14.04□□□□□ -0.16
SMCHD1-201ENST00000320876 CEACAM1P13688 526 aa14.04□□□□□ -0.16
SMCHD1-201ENST00000320876 WDR90Q96KV7 1748 aa14.04□□□□□ -0.16
SMCHD1-201ENST00000320876 NPC2P61916 151 aa14.03□□□□□ -0.16
SMCHD1-201ENST00000320876 MRPL27Q9P0M9 148 aaKnown RBP14.03□□□□□ -0.16
SMCHD1-201ENST00000320876 PRR19A6NJB7 356 aa14.03□□□□□ -0.16
SMCHD1-201ENST00000320876 SYS1-DBNDD2H3BUS1 97 aa14.03□□□□□ -0.16
SMCHD1-201ENST00000320876 FAM216BQ8N7L0 139 aa14.03□□□□□ -0.16
SMCHD1-201ENST00000320876 F8WEM9 126 aa14.03□□□□□ -0.16
SMCHD1-201ENST00000320876 RSPO3Q9BXY4 272 aaPredicted RBP14.03□□□□□ -0.16
SMCHD1-201ENST00000320876 FAM166AQ6J272 317 aa14.02□□□□□ -0.16
SMCHD1-201ENST00000320876 LINC00114Q6XXX2 140 aa14.02□□□□□ -0.16
SMCHD1-201ENST00000320876 CCL1P22362 96 aa14.02□□□□□ -0.16
SMCHD1-201ENST00000320876 GAGE2AQ6NT46 116 aa14.02□□□□□ -0.17
SMCHD1-201ENST00000320876 TMEM133Q9H2Q1 129 aa14.02□□□□□ -0.17
SMCHD1-201ENST00000320876 CHCHD5Q9BSY4 110 aa14.02□□□□□ -0.17
SMCHD1-201ENST00000320876 KIF26AQ9ULI4 1882 aaPredicted RBP14.02□□□□□ -0.17
SMCHD1-201ENST00000320876 HTN3P15516 51 aa14.02□□□□□ -0.17
SMCHD1-201ENST00000320876 HOXD3P31249 432 aaPredicted RBP14.02□□□□□ -0.17
SMCHD1-201ENST00000320876 IGKV1D-13A0A0B4J2D9 117 aa14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 IGKV1-13P0DP09 117 aa14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 PSG1P11464 419 aa14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 CSRP3P50461 194 aa14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 PRADC1Q9BSG0 188 aa14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 LHX2P50458 406 aa14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 DUTP33316 252 aaKnown RBP14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 LINC01551Q86U37 167 aa14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 SLC25A28Q96A46 364 aa14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 WFDC1Q9HC57 220 aa14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 ADAMTSL5Q6ZMM2 481 aa14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 NUP35Q8NFH5 326 aa14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 TNS1Q9HBL0 1735 aaKnown RBP14.01□□□□□ -0.17
SMCHD1-201ENST00000320876 NPIPB5A8MRT5 1133 aa14□□□□□ -0.17
SMCHD1-201ENST00000320876 PSG7Q13046 419 aa14□□□□□ -0.17
SMCHD1-201ENST00000320876 GLRX5Q86SX6 157 aa14□□□□□ -0.17
SMCHD1-201ENST00000320876 MRPS18CQ9Y3D5 142 aaKnown RBP14□□□□□ -0.17
SMCHD1-201ENST00000320876 MLNRO43193 412 aa14□□□□□ -0.17
SMCHD1-201ENST00000320876 COLCA1Q6ZS62 124 aa14□□□□□ -0.17
SMCHD1-201ENST00000320876 LY96Q9Y6Y9 160 aa14□□□□□ -0.17
SMCHD1-201ENST00000320876 MED13Q9UHV7 2174 aa14□□□□□ -0.17
SMCHD1-201ENST00000320876 hDV102S1A0JD36 115 aa14□□□□□ -0.17
SMCHD1-201ENST00000320876 C9orf153Q5TBE3 101 aa14□□□□□ -0.17
SMCHD1-201ENST00000320876 PAX8Q06710 450 aa14□□□□□ -0.17
SMCHD1-201ENST00000320876 MESP2Q0VG99 397 aa14□□□□□ -0.17
SMCHD1-201ENST00000320876 CITED1Q99966 193 aa13.99□□□□□ -0.17
SMCHD1-201ENST00000320876 TREML4Q6UXN2 200 aa13.99□□□□□ -0.17
SMCHD1-201ENST00000320876 TMEM8BA6NDV4 472 aa13.99□□□□□ -0.17
SMCHD1-201ENST00000320876 A0A0U1RRA0 63 aa13.99□□□□□ -0.17
SMCHD1-201ENST00000320876 OR9G9P0C7N8 305 aa13.99□□□□□ -0.17
SMCHD1-201ENST00000320876 ID3Q02535 119 aa13.99□□□□□ -0.17
SMCHD1-201ENST00000320876 SPSB2Q99619 263 aa13.99□□□□□ -0.17
SMCHD1-201ENST00000320876 DENND4CQ5VZ89 1909 aa13.99□□□□□ -0.17
SMCHD1-201ENST00000320876 INAFM2P0DMQ5 153 aa13.99□□□□□ -0.17
SMCHD1-201ENST00000320876 MPV17L2Q567V2 206 aa13.99□□□□□ -0.17
SMCHD1-201ENST00000320876 RFPL3SP0C7P2 107 aa13.99□□□□□ -0.17
SMCHD1-201ENST00000320876 C17orf100A8MU93 164 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 IMMP1LQ96LU5 166 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 GGTLC1Q9BX51 225 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 H3BMM0 161 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 J3QRE1 110 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 UBE2WQ96B02 151 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 CELA3BP08861 270 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 RASL10AQ92737 203 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 GREM1O60565 184 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 ERCC8Q13216 396 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 VCYO14598 125 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 DPH3P1Q9H4G8 78 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 SELLP14151 372 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 LINC01560Q8TB33 94 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 PLSCR4Q9NRQ2 329 aa13.98□□□□□ -0.17
SMCHD1-201ENST00000320876 IGHV3-11P01762 117 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 PSG3Q16557 428 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 NCOR1P1Q9H4R4 102 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 DMRTC2Q8IXT2 367 aaPredicted RBP13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 SP7Q8TDD2 431 aaPredicted RBP13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 TRGV9Q99603 122 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 TIMM21Q9BVV7 248 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 NEUROG3Q9Y4Z2 214 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 TRAV8-3A0A0A6YYJ7 113 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 IGKV1D-43A0A0B4J1Z2 117 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 MYMXA0A1B0GTQ4 84 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 PLXNA4Q9HCM2 1894 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 TRBV20-1A0A075B6N2 111 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 TNFRSF14Q92956 283 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 RIF1Q5UIP0 2472 aaKnown RBP13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 MBNL3Q9NUK0 354 aaKnown RBP13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 PPIFP30405 207 aaKnown RBP13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 H0YIZ8 118 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 NAA38Q9BRA0 125 aaKnown RBP13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 CHAC1Q9BUX1 264 aa13.97□□□□□ -0.17
SMCHD1-201ENST00000320876 CD5LO43866 347 aa13.96□□□□□ -0.17
SMCHD1-201ENST00000320876 IGHV1-2P23083 117 aa13.96□□□□□ -0.17
SMCHD1-201ENST00000320876 KIAA1549LQ6ZVL6 1849 aa13.96□□□□□ -0.17
SMCHD1-201ENST00000320876 IGKV2-40A0A087WW87 121 aaPredicted RBP13.96□□□□□ -0.17
SMCHD1-201ENST00000320876 IGKV2D-40P01614 121 aaPredicted RBP13.96□□□□□ -0.17
SMCHD1-201ENST00000320876 GFRA4Q9GZZ7 299 aa13.96□□□□□ -0.17
SMCHD1-201ENST00000320876 NCR2O95944 276 aa13.96□□□□□ -0.17
SMCHD1-201ENST00000320876 CTSBP07858 339 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms