RNA–Protein interactions for RNA: ENST00000312492.2

HOXC5-201, Transcript of homeobox C5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC5, Length 1,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5-201ENST00000312492 FAM223BA6NKX1 122 aa13.25□□□□□ -0.29
HOXC5-201ENST00000312492 H3BRN7 92 aa13.25□□□□□ -0.29
HOXC5-201ENST00000312492 AP4M1O00189 453 aa13.25□□□□□ -0.29
HOXC5-201ENST00000312492 SMAD7O15105 426 aaKnown RBP13.25□□□□□ -0.29
HOXC5-201ENST00000312492 FAM223AQ8IWN6 122 aa13.25□□□□□ -0.29
HOXC5-201ENST00000312492 CIARTQ8N365 385 aaPredicted RBP13.25□□□□□ -0.29
HOXC5-201ENST00000312492 PRELID1Q9Y255 219 aa13.25□□□□□ -0.29
HOXC5-201ENST00000312492 TRBV7-1A0A0A6YYK4 115 aa13.24□□□□□ -0.29
HOXC5-201ENST00000312492 ATP5G2Q06055 141 aa13.24□□□□□ -0.29
HOXC5-201ENST00000312492 USF2Q15853 346 aaPredicted RBP13.24□□□□□ -0.29
HOXC5-201ENST00000312492 Q6YL49 198 aa13.24□□□□□ -0.29
HOXC5-201ENST00000312492 BLNKQ8WV28 456 aa13.24□□□□□ -0.29
HOXC5-201ENST00000312492 ISOC2Q96AB3 205 aa13.24□□□□□ -0.29
HOXC5-201ENST00000312492 FOXC2Q99958 501 aa13.24□□□□□ -0.29
HOXC5-201ENST00000312492 CHRDL1Q9BU40 450 aa13.24□□□□□ -0.29
HOXC5-201ENST00000312492 TMEM14CQ9P0S9 112 aa13.24□□□□□ -0.29
HOXC5-201ENST00000312492 CSMD1Q96PZ7 3565 aa13.24□□□□□ -0.29
HOXC5-201ENST00000312492 H3BUA1 57 aa13.23□□□□□ -0.29
HOXC5-201ENST00000312492 TRGV3P03979 118 aa13.23□□□□□ -0.29
HOXC5-201ENST00000312492 NBEAP1P0C6P0 100 aa13.23□□□□□ -0.29
HOXC5-201ENST00000312492 CRYBB3P26998 211 aa13.23□□□□□ -0.29
HOXC5-201ENST00000312492 ADMP35318 185 aa13.23□□□□□ -0.29
HOXC5-201ENST00000312492 ZNF600Q6ZNG1 722 aa13.23□□□□□ -0.29
HOXC5-201ENST00000312492 TEX29Q8N6K0 151 aa13.23□□□□□ -0.29
HOXC5-201ENST00000312492 NOL4LQ96MY1 436 aaPredicted RBP13.23□□□□□ -0.29
HOXC5-201ENST00000312492 VPREB3Q9UKI3 123 aa13.23□□□□□ -0.29
HOXC5-201ENST00000312492 CLEC3BP05452 202 aa13.23□□□□□ -0.29
HOXC5-201ENST00000312492 CLEC19AQ6UXS0 136 aa13.23□□□□□ -0.29
HOXC5-201ENST00000312492 CCDC140Q96MF4 163 aa13.23□□□□□ -0.29
HOXC5-201ENST00000312492 COLCA2A8K830 154 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 BRI3O95415 125 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 MT-ND4LP03901 98 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 SNRPCP09234 159 aaKnown RBP13.22□□□□□ -0.29
HOXC5-201ENST00000312492 PPIFP30405 207 aaKnown RBP13.22□□□□□ -0.29
HOXC5-201ENST00000312492 TPPP2P59282 170 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 RNF212Q495C1 297 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 ZNF343Q6P1L6 599 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 Q6ZS46 218 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 LINC01551Q86U37 167 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 ZNF329Q86UD4 541 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 BPIFA4PQ86YQ2 179 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 ELOVL1Q9BW60 279 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 CTDSP1Q9GZU7 261 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 GNB4Q9HAV0 340 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 TMEM242Q9NWH2 141 aa13.22□□□□□ -0.29
HOXC5-201ENST00000312492 CXorf65A6NEN9 183 aa13.21□□□□□ -0.29
HOXC5-201ENST00000312492 TGOLN2O43493 480 aa13.21□□□□□ -0.29
HOXC5-201ENST00000312492 RPL35P42766 123 aaKnown RBP13.21□□□□□ -0.29
HOXC5-201ENST00000312492 RANP62826 216 aaKnown RBP13.21□□□□□ -0.29
HOXC5-201ENST00000312492 CTAG1AP78358 180 aa13.21□□□□□ -0.29
HOXC5-201ENST00000312492 ATP6V0BQ99437 205 aa13.21□□□□□ -0.29
HOXC5-201ENST00000312492 TCEAL7Q9BRU2 100 aa13.21□□□□□ -0.29
HOXC5-201ENST00000312492 ZNF580Q9UK33 172 aa13.21□□□□□ -0.29
HOXC5-201ENST00000312492 CSPG4Q6UVK1 2322 aa13.21□□□□□ -0.29
HOXC5-201ENST00000312492 ZNF98A6NK75 572 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 C9JCJ5 164 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 BMPR1BO00238 502 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 HIST1H1EP10412 219 aaKnown RBP13.2□□□□□ -0.3
HOXC5-201ENST00000312492 S100A7P31151 101 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 OR4F17Q8NGA8 305 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 RABAC1Q9UI14 185 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 RNF24Q9Y225 148 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 TRBV20OR9-2A0A075B6H5 130 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 HELTA6NFD8 242 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 CLDN34H7C241 214 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 FAM24BQ8N5W8 94 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 C2CD4CQ8TF44 421 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 PRDM13Q9H4Q3 707 aa13.2□□□□□ -0.3
HOXC5-201ENST00000312492 CREBBPQ92793 2442 aa13.19□□□□□ -0.3
HOXC5-201ENST00000312492 PGPEP1LA6NFU8 196 aa13.19□□□□□ -0.3
HOXC5-201ENST00000312492 HOXA3O43365 443 aaPredicted RBP13.19□□□□□ -0.3
HOXC5-201ENST00000312492 PF4V1P10720 104 aa13.19□□□□□ -0.3
HOXC5-201ENST00000312492 ATF4P18848 351 aaPredicted RBP13.19□□□□□ -0.3
HOXC5-201ENST00000312492 MYCNOSP40205 109 aa13.19□□□□□ -0.3
HOXC5-201ENST00000312492 HIST1H2BAQ96A08 127 aa13.19□□□□□ -0.3
HOXC5-201ENST00000312492 IGHV3-35A0A0C4DH35 117 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 RELQ04864 619 aaPredicted RBP13.18□□□□□ -0.3
HOXC5-201ENST00000312492 ANAPC16Q96DE5 110 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 USMG5Q96IX5 58 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 ZNF586Q9NXT0 402 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 LY96Q9Y6Y9 160 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 NBPF19A0A087WUL8 3843 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 ZFHX3Q15911 3703 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 PGPA6NDG6 321 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 H3BTX0 84 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 H7BYZ3 331 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 PEX7O00628 323 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 SLC25A5P05141 298 aaKnown RBP13.18□□□□□ -0.3
HOXC5-201ENST00000312492 GNG4P50150 75 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 CNN1P51911 297 aaKnown RBP13.18□□□□□ -0.3
HOXC5-201ENST00000312492 CENPWQ5EE01 88 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 TOMM20LQ6UXN7 152 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 OCC1Q8TAD7 63 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 Q9H3A6 140 aa13.18□□□□□ -0.3
HOXC5-201ENST00000312492 AURKAIP1Q9NWT8 199 aaPredicted RBP13.18□□□□□ -0.3
HOXC5-201ENST00000312492 IGLV1-40P01703 118 aa13.17□□□□□ -0.3
HOXC5-201ENST00000312492 IGLC2P0DOY2 106 aa13.17□□□□□ -0.3
HOXC5-201ENST00000312492 CFHR3Q02985 330 aa13.17□□□□□ -0.3
HOXC5-201ENST00000312492 YPEL4Q96NS1 127 aa13.17□□□□□ -0.3
HOXC5-201ENST00000312492 ZFAND3Q9H8U3 227 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms