RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 TMEM126AQ9H061 195 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 DOCK10Q96BY6 2186 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 KIAA1549Q9HCM3 1950 aa4.9□□□□□ -1.63
SEC22A-201ENST00000309934 TRAV5A0A0B4J249 113 aa4.9□□□□□ -1.63
SEC22A-201ENST00000309934 IGKV1-6A0A0C4DH72 117 aa4.9□□□□□ -1.63
SEC22A-201ENST00000309934 FCN3O75636 299 aa4.9□□□□□ -1.63
SEC22A-201ENST00000309934 IGLC2P0DOY2 106 aa4.9□□□□□ -1.63
SEC22A-201ENST00000309934 IGLC3P0DOY3 106 aa4.9□□□□□ -1.63
SEC22A-201ENST00000309934 IFITM1P13164 125 aa4.9□□□□□ -1.63
SEC22A-201ENST00000309934 JMJD8Q96S16 334 aa4.9□□□□□ -1.63
SEC22A-201ENST00000309934 MRPL20Q9BYC9 149 aaKnown RBP4.9□□□□□ -1.63
SEC22A-201ENST00000309934 ZNF355PQ9NSJ1 428 aa4.9□□□□□ -1.63
SEC22A-201ENST00000309934 TNRC6AQ8NDV7 1962 aaKnown RBP4.9□□□□□ -1.63
SEC22A-201ENST00000309934 TRAV8-2A0A0B4J237 113 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 INS-IGF2F8WCM5 200 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 BUB1B-PAK6H3BSN5 160 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 LOXP28300 417 aaPredicted RBP4.89□□□□□ -1.63
SEC22A-201ENST00000309934 ZNF137PP52743 207 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 TDRG1Q3Y452 100 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 GAGE13Q4V321 117 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 RPL39P5Q59GN2 51 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 TMEM14EPQ6UXP3 125 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 SYT8Q8NBV8 401 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 TMEM116Q8NCL8 245 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 GPR82Q96P67 336 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 F11RQ9Y624 299 aaKnown RBP4.89□□□□□ -1.63
SEC22A-201ENST00000309934 TNRC18O15417 2968 aaPredicted RBP4.89□□□□□ -1.63
SEC22A-201ENST00000309934 PTPRBP23467 1997 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 H0YJW9 148 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 SERF1AO75920 110 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 OR5AL1P0C617 328 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 SAMD5Q5TGI4 173 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 OR11H6Q8NGC7 330 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 OR2T6Q8NHC8 308 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 NABP2Q9BQ15 211 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 AAMDCQ9H7C9 122 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 TRBV24-1A0A075B6N3 115 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 IGSF23A1L1A6 192 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 H3BP45 60 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 ZNF585BQ52M93 769 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 C10orf91Q5T1B1 145 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 C10orf113Q5VZT2 155 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 LINC01356Q8N9X3 169 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 MYO18BQ8IUG5 2567 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 A0A1W2PS18 150 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 RRHO14718 337 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 PF4P02776 101 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 IL15RAQ13261 267 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 PVRIGQ6DKI7 326 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 CRIP3Q6Q6R5 217 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 C5orf24Q7Z6I8 188 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 TMEM256Q8N2U0 113 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 ZNF525Q8N782 197 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 C3orf56Q8N813 242 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 MRAPQ8TCY5 172 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 IMMP2LQ96T52 175 aa4.89□□□□□ -1.63
SEC22A-201ENST00000309934 IGHV1-3A0A0C4DH29 117 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 TMEM250H0YL14 139 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 SAA1P0DJI8 122 aaPredicted RBP4.88□□□□□ -1.63
SEC22A-201ENST00000309934 LOXL3P58215 753 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 UBE2G1P62253 170 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 C2orf68Q2NKX9 166 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 PPP1R27Q86WC6 154 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 STPG3Q8N7X2 389 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 EEF1AKMT3Q96AZ1 226 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 RETNQ9HD89 108 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 PRR13Q9NZ81 148 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 PXMP4Q9Y6I8 212 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 EYSQ5T1H1 3165 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 COL8A2P25067 703 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 FOXL1Q12952 345 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 TMEM97Q5BJF2 176 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 FAM201AQ5SY85 155 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 SP5Q6BEB4 398 aaPredicted RBP4.88□□□□□ -1.63
SEC22A-201ENST00000309934 PMCHL2Q9BQD1 86 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 METRNQ9UJH8 293 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 HIGD1AQ9Y241 93 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 WDR83OSQ9Y284 106 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 SPTBN1Q01082 2364 aaKnown RBP4.88□□□□□ -1.63
SEC22A-201ENST00000309934 IGKV1-5P01602 117 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 BCL2P10415 239 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 CCL3L1P16619 93 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 PMVKQ15126 192 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 PRSS8Q16651 343 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 OR9G4Q8NGQ1 327 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 GGTLC1Q9BX51 225 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 MOB4Q9Y3A3 225 aa4.88□□□□□ -1.63
SEC22A-201ENST00000309934 PRUNE2Q8WUY3 3088 aa4.87□□□□□ -1.63
SEC22A-201ENST00000309934 ZNF462Q96JM2 2506 aa4.87□□□□□ -1.63
SEC22A-201ENST00000309934 COL6A6A6NMZ7 2263 aa4.87□□□□□ -1.63
SEC22A-201ENST00000309934 EVI2AP22794 236 aa4.87□□□□□ -1.63
SEC22A-201ENST00000309934 NMUP48645 174 aa4.87□□□□□ -1.63
SEC22A-201ENST00000309934 SRSF1Q07955 248 aaKnown RBP eCLIP4.87□□□□□ -1.63
SEC22A-201ENST00000309934 FXYD3Q14802 87 aa4.87□□□□□ -1.63
SEC22A-201ENST00000309934 GLMPQ8WWB7 406 aa4.87□□□□□ -1.63
SEC22A-201ENST00000309934 ARPC1AQ92747 370 aa4.87□□□□□ -1.63
SEC22A-201ENST00000309934 MRPL18Q9H0U6 180 aaKnown RBP4.87□□□□□ -1.63
SEC22A-201ENST00000309934 MS4A6AQ9H2W1 248 aa4.87□□□□□ -1.63
SEC22A-201ENST00000309934 TMEM14BQ9NUH8 114 aa4.87□□□□□ -1.63
SEC22A-201ENST00000309934 ANK3Q12955 4377 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms