RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 KAAG1Q9UBP8 84 aa9.24□□□□□ -0.93
PCDHGC3-201ENST00000308177 SPRNQ5BIV9 151 aa9.24□□□□□ -0.93
PCDHGC3-201ENST00000308177 TLN1Q9Y490 2541 aaKnown RBP9.24□□□□□ -0.93
PCDHGC3-201ENST00000308177 B4DSR2 109 aa9.24□□□□□ -0.93
PCDHGC3-201ENST00000308177 ADMP35318 185 aa9.24□□□□□ -0.93
PCDHGC3-201ENST00000308177 UBE2CO00762 179 aa9.24□□□□□ -0.93
PCDHGC3-201ENST00000308177 EXOC3-AS1Q8N2X6 119 aa9.24□□□□□ -0.93
PCDHGC3-201ENST00000308177 DDB2Q92466 427 aa9.24□□□□□ -0.93
PCDHGC3-201ENST00000308177 EML6Q6ZMW3 1958 aa9.24□□□□□ -0.93
PCDHGC3-201ENST00000308177 FABP5P3A8MUU1 101 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 SHISA9B4DS77 424 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 SERF1AO75920 110 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 LHBP01229 141 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 SAA4P35542 130 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 FER1L6-AS1Q8NA97 138 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 TRBV20OR9-2A0A075B6H5 130 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 A0A1B0GW15 77 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 HERVK_113P61574 105 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 PAX8Q06710 450 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 DUX5Q96PT3 197 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 CNTFRP26992 372 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 ZNF726P1Q15940 193 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 NUDT10Q8NFP7 164 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 TSKUQ8WUA8 353 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 NUDT11Q96G61 164 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 PRELID3AQ96N28 172 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 SRSF8Q9BRL6 282 aaKnown RBP9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 SSBP4Q9BWG4 385 aaPredicted RBP9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 PRSS22Q9GZN4 317 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 ARFGEF3Q5TH69 2177 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 C5orf52A6NGY3 159 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 H3BUX3 64 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 TCRAP04437 139 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 TCTAP57738 103 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
PCDHGC3-201ENST00000308177 GRNP28799 593 aaKnown RBP9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 NMUP48645 174 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 PET117Q6UWS5 81 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 ZNF562Q6V9R5 426 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 ATOH7Q8N100 152 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 UQCR10Q9UDW1 63 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 LY96Q9Y6Y9 160 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 M0R381 172 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 POU2AF1Q16633 256 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 MED12LQ86YW9 2145 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 ARL6IP6Q8N6S5 226 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 RAX2Q96IS3 184 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 GNB1LQ9BYB4 327 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 SRRM4A7MD48 611 aaKnown RBP9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 NUDT3O95989 172 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 RPL15P61313 204 aaKnown RBP9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 DIAPH2-AS1Q14236 149 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 OR4C5Q8NGB2 326 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 ASCL2Q99929 193 aa9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 PRB4P10163 310 aaPredicted RBP9.22□□□□□ -0.93
PCDHGC3-201ENST00000308177 PCNTO95613 3336 aa9.21□□□□□ -0.93
PCDHGC3-201ENST00000308177 TMEM8BA6NDV4 472 aa9.21□□□□□ -0.93
PCDHGC3-201ENST00000308177 RNF224P0DH78 156 aa9.21□□□□□ -0.93
PCDHGC3-201ENST00000308177 WT1-ASQ06250 92 aa9.21□□□□□ -0.93
PCDHGC3-201ENST00000308177 TMEM70Q9BUB7 260 aa9.21□□□□□ -0.93
PCDHGC3-201ENST00000308177 APOHP02749 345 aaPredicted RBP9.21□□□□□ -0.94
PCDHGC3-201ENST00000308177 CTSZQ9UBR2 303 aa9.21□□□□□ -0.94
PCDHGC3-201ENST00000308177 IGHV3OR16-12A0A075B7B8 117 aa9.21□□□□□ -0.94
PCDHGC3-201ENST00000308177 A6NNC1 897 aa9.21□□□□□ -0.94
PCDHGC3-201ENST00000308177 ASIPP42127 132 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 UBE2E1P51965 193 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 FAM74A4Q5TZK3 123 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 OR4X2Q8NGF9 303 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 KCNS1Q96KK3 526 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 GSN-AS1Q9NRJ2 163 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 RPLP1P05386 114 aaKnown RBP9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 Q1RN00 199 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 TMEM190Q8WZ59 177 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 GFI1BQ5VTD9 330 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 ORMDL3Q8N138 153 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 TPSG1Q9NRR2 321 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 SAMD13Q5VXD3 122 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 HIST1H2BLQ99880 126 aa9.2□□□□□ -0.94
PCDHGC3-201ENST00000308177 CSPG4Q6UVK1 2322 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 COL5A1-AS1Q5SY13 56 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 C10orf91Q5T1B1 145 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 KLK15Q9H2R5 256 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 CBY3A6NI87 242 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 TOMM40O96008 361 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 SOD3P08294 240 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 HIST3H2BBQ8N257 126 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 NRN1Q9NPD7 142 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 TRAV8-1A0A0A6YYK1 113 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 NPIPB5A8MRT5 1133 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 NDUFS8O00217 210 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 MSMPQ1L6U9 139 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 RNF151Q2KHN1 245 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 FAM209BQ5JX69 171 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 LINC00479Q96M42 142 aa9.19□□□□□ -0.94
PCDHGC3-201ENST00000308177 LRP4O75096 1905 aa9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 OR4C46A6NHA9 309 aa9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 CRIP3Q6Q6R5 217 aa9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 ATP5L2Q7Z4Y8 100 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms