RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 Q8N2B8 174 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 OR1L4Q8NGR5 311 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 FAM167A-AS1Q96KT0 104 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 PFDN5Q99471 154 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 PBDC1Q9BVG4 233 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 C19orf24Q9BVV8 132 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 SLC25A2Q9BXI2 301 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 MRPL32Q9BYC8 188 aaKnown RBP5.39□□□□□ -1.55
PTCD2-201ENST00000308077 TRBV7-1A0A0A6YYK4 115 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 KRTAP9-6A0A140TA67 174 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 WI2-2373I1.2A0A1W2PRP0 233 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 CXorf1O96002 111 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 IGHG4P01861 327 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 CLEC3BP05452 202 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 PF4V1P10720 104 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 SRD5A1P18405 259 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 GCHFRP30047 84 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 PMS2P11Q13670 270 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 RBMS3Q6XE24 437 aaKnown RBP5.39□□□□□ -1.55
PTCD2-201ENST00000308077 LINC00305Q7Z4B0 112 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 IQCF2Q8IXL9 164 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 ZNF491Q8N8L2 437 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 OR51G1Q8NGK1 321 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 RXFP4Q8TDU9 374 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 EEF1AKMT3Q96AZ1 226 aa5.39□□□□□ -1.55
PTCD2-201ENST00000308077 MRPL27Q9P0M9 148 aaKnown RBP5.39□□□□□ -1.55
PTCD2-201ENST00000308077 ELOA3CA0A087WX78 387 aaPredicted RBP5.38□□□□□ -1.55
PTCD2-201ENST00000308077 IGHV3-35A0A0C4DH35 117 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 FAM181BA6NEQ2 426 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 FAM74A7A6NL05 159 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 F8W036 122 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 HYPMO75409 117 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 OR2C1O95371 312 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 TRBV12-3P01733 135 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 IL4P05112 153 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 C8orf88P0DMB2 117 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 PSMB8P28062 276 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 PPT1P50897 306 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 RAB9AP51151 201 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 PEA15Q15121 130 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 USF2Q15853 346 aaPredicted RBP5.38□□□□□ -1.55
PTCD2-201ENST00000308077 FAM74A3Q4VXF1 159 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 RNF125Q96EQ8 232 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 RNF2Q99496 336 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 SERTAD4Q9NUC0 356 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 TECRQ9NZ01 308 aaKnown RBP5.38□□□□□ -1.55
PTCD2-201ENST00000308077 HIGD1AQ9Y241 93 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 CARHSP1Q9Y2V2 147 aaKnown RBP5.38□□□□□ -1.55
PTCD2-201ENST00000308077 INAFM1C9JVW0 142 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 PPP5D1E7EU14 171 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 CLDN34H7C241 214 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 NUPL2O15504 423 aaKnown RBP5.38□□□□□ -1.55
PTCD2-201ENST00000308077 TGOLN2O43493 480 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 PAGE4O60829 102 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 IGHV3-11P01762 117 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 FABP1P07148 127 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 SRP19P09132 144 aaKnown RBP5.38□□□□□ -1.55
PTCD2-201ENST00000308077 PYYP10082 97 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 PSMB3P49720 205 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 UBE2G2P60604 165 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 BTN1A1Q13410 526 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 KIAA0141Q14154 515 aaPredicted RBP5.38□□□□□ -1.55
PTCD2-201ENST00000308077 KHDC3LQ587J8 217 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 LEMD1Q68G75 181 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 Q6ZSV7 163 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.38□□□□□ -1.55
PTCD2-201ENST00000308077 OR5AU1Q8NGC0 362 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 USMG5Q96IX5 58 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 SLC25A39Q9BZJ4 359 aaPredicted RBP5.38□□□□□ -1.55
PTCD2-201ENST00000308077 ZFAND3Q9H8U3 227 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 MANBALQ9NQG1 85 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 CDC42EP3Q9UKI2 254 aa5.38□□□□□ -1.55
PTCD2-201ENST00000308077 PUS1Q9Y606 427 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTCD2-201ENST00000308077 IGHV3OR16-8A0A075B7F1 116 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 H3BRN7 92 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 DNASE2O00115 360 aaPredicted RBP5.37□□□□□ -1.55
PTCD2-201ENST00000308077 OR7C2O60412 319 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 IFNA1P01562 189 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 HSPB1P04792 205 aaKnown RBP5.37□□□□□ -1.55
PTCD2-201ENST00000308077 OR10J4P0C629 311 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 TAS2R45P59539 299 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 CD81P60033 236 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 ZNF600Q6ZNG1 722 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 PQLC2Q6ZP29 291 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 SUN5Q8TC36 379 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 Q8WTZ3 238 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 ATP6V0BQ99437 205 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 GNB4Q9HAV0 340 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 VAX2Q9UIW0 290 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 YTHDF2Q9Y5A9 579 aaKnown RBP5.37□□□□□ -1.55
PTCD2-201ENST00000308077 RYR2Q92736 4967 aa5.37□□□□□ -1.55
PTCD2-201ENST00000308077 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.36□□□□□ -1.55
PTCD2-201ENST00000308077 TMEM89A2RUT3 159 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 RPLP1P05386 114 aaKnown RBP5.36□□□□□ -1.55
PTCD2-201ENST00000308077 RNASE1P07998 156 aaKnown RBP5.36□□□□□ -1.55
PTCD2-201ENST00000308077 ATP5G3P48201 142 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 HILS1P60008 231 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 MEF2BQ02080 365 aaPredicted RBP5.36□□□□□ -1.55
PTCD2-201ENST00000308077 SCGB2A2Q13296 93 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 ZNF343Q6P1L6 599 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms