RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 RNF125Q96EQ8 232 aa11.96□□□□□ -0.49
PPP4R4-201ENST00000304338 BTF3L4Q96K17 158 aa11.96□□□□□ -0.49
PPP4R4-201ENST00000304338 MINOS1-NBL1R4GNA1 71 aa11.96□□□□□ -0.49
PPP4R4-201ENST00000304338 NOTCH3Q9UM47 2321 aa11.96□□□□□ -0.49
PPP4R4-201ENST00000304338 ITPR1Q14643 2758 aa11.96□□□□□ -0.49
PPP4R4-201ENST00000304338 G3V318 75 aa11.96□□□□□ -0.49
PPP4R4-201ENST00000304338 SAMD10Q9BYL1 202 aa11.96□□□□□ -0.49
PPP4R4-201ENST00000304338 SLC25A39Q9BZJ4 359 aaPredicted RBP11.96□□□□□ -0.49
PPP4R4-201ENST00000304338 SETD2Q9BYW2 2564 aaPredicted RBP11.96□□□□□ -0.5
PPP4R4-201ENST00000304338 ZNF785A8K8V0 405 aa11.96□□□□□ -0.5
PPP4R4-201ENST00000304338 IGLC1P0CG04 106 aa11.96□□□□□ -0.5
PPP4R4-201ENST00000304338 RPL11P62913 178 aaKnown RBP11.96□□□□□ -0.5
PPP4R4-201ENST00000304338 S100A7AQ86SG5 101 aa11.96□□□□□ -0.5
PPP4R4-201ENST00000304338 K7EN84 100 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 CDX1P47902 265 aaPredicted RBP11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 UBE2E1P51965 193 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 BSNQ9UPA5 3926 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 LY6LH3BQJ8 138 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 COL8A1P27658 744 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 FAM167A-AS1Q96KT0 104 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 TBX15Q96SF7 602 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 AAMDCQ9H7C9 122 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 UBE2CO00762 179 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 LMO4P61968 165 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 NDPQ00604 133 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 PITPNC1Q9UKF7 332 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 EPDR1Q9UM22 224 aa11.95□□□□□ -0.5
PPP4R4-201ENST00000304338 IGKV3-7A0A075B6H7 116 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 TMEM8BA6NDV4 472 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 K7EQM0 130 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 NDUFB8O95169 186 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 HOXA5P20719 270 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 FBLN7Q53RD9 439 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 THAP8Q8NA92 274 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 PACRGQ96M98 296 aaPredicted RBP11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 CSN1S1P47710 185 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 RHOGP84095 191 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 TMEM249Q2WGJ8 235 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 CLEC19AQ6UXS0 136 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 IL36BQ9NZH7 164 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 C15orf32Q32M92 178 aa11.94□□□□□ -0.5
PPP4R4-201ENST00000304338 CRYGBP07316 175 aa11.93□□□□□ -0.5
PPP4R4-201ENST00000304338 CFHR4Q92496 578 aa11.93□□□□□ -0.5
PPP4R4-201ENST00000304338 IGHV4-30-2A0A087WSY4 118 aa11.93□□□□□ -0.5
PPP4R4-201ENST00000304338 HIF1ANQ9NWT6 349 aa11.93□□□□□ -0.5
PPP4R4-201ENST00000304338 TMSB15BA0A087X1C1 80 aa11.93□□□□□ -0.5
PPP4R4-201ENST00000304338 K7EIM0 57 aa11.93□□□□□ -0.5
PPP4R4-201ENST00000304338 ATP6V0E1O15342 81 aa11.93□□□□□ -0.5
PPP4R4-201ENST00000304338 IGKV1-17P01599 117 aa11.93□□□□□ -0.5
PPP4R4-201ENST00000304338 CLEC3BP05452 202 aa11.93□□□□□ -0.5
PPP4R4-201ENST00000304338 ZNF329Q86UD4 541 aa11.93□□□□□ -0.5
PPP4R4-201ENST00000304338 FXYD5Q96DB9 178 aa11.93□□□□□ -0.5
PPP4R4-201ENST00000304338 I3L2K1 104 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 CRISP2P16562 243 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 RPL15P61313 204 aaKnown RBP11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 MRPL18Q9H0U6 180 aaKnown RBP11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 SELENOKQ9Y6D0 94 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 INS-IGF2F8WCM5 200 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 SCGB1D1O95968 90 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 P01737 135 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 IGFL4Q6B9Z1 124 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 C5orf17Q8NAS9 161 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 SIRPDQ9H106 197 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 DCHS2Q6V1P9 2916 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 A0A1B0GUS0 222 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 MRGPRG-AS1Q2M3A8 158 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 C1orf122Q6ZSJ8 110 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 C17orf77Q96MU5 243 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 HSPB9Q9BQS6 159 aa11.92□□□□□ -0.5
PPP4R4-201ENST00000304338 OOSP1A8MZH6 123 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 M0R3E3 92 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 TGFAP01135 160 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 CD99P14209 185 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 OR2D3Q8NGH3 330 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 DMRT1Q9Y5R6 373 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 USP24Q9UPU5 2620 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 ZNF705FA8MVS1 300 aaPredicted RBP11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 ODF3BA8MYP8 253 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 C9JCJ5 164 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 FSTL3O95633 263 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 ZNF705DP0CH99 300 aaPredicted RBP11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 ZNF705BP0CI00 300 aaPredicted RBP11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 CT45A10P0DMU9 189 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 TRAV30A0A087WSZ9 112 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 HIST1H1EP10412 219 aaKnown RBP11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 PF4V1P10720 104 aa11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 USF2Q15853 346 aaPredicted RBP11.91□□□□□ -0.5
PPP4R4-201ENST00000304338 CENPVL3A0A0U1RRI6 287 aa11.9□□□□□ -0.5
PPP4R4-201ENST00000304338 GGCTO75223 188 aaKnown RBP11.9□□□□□ -0.5
PPP4R4-201ENST00000304338 IGHV3-11P01762 117 aa11.9□□□□□ -0.5
PPP4R4-201ENST00000304338 HLA-DRB1P01911 266 aa11.9□□□□□ -0.5
PPP4R4-201ENST00000304338 SMIM6P0DI80 62 aa11.9□□□□□ -0.5
PPP4R4-201ENST00000304338 NTF3P20783 257 aa11.9□□□□□ -0.5
PPP4R4-201ENST00000304338 S100A12P80511 92 aa11.9□□□□□ -0.5
PPP4R4-201ENST00000304338 YPEL4Q96NS1 127 aa11.9□□□□□ -0.5
PPP4R4-201ENST00000304338 SOX21Q9Y651 276 aaPredicted RBP11.9□□□□□ -0.5
PPP4R4-201ENST00000304338 H3BUX3 64 aa11.9□□□□□ -0.5
PPP4R4-201ENST00000304338 PHOX2AO14813 284 aa11.9□□□□□ -0.5
PPP4R4-201ENST00000304338 RNF224P0DH78 156 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms