RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 DEFA6Q01524 100 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 RNF212Q495C1 297 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 RNF125Q96EQ8 232 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 GNB4Q9HAV0 340 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 IGHV4-31P0DP07 118 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 NPPCP23582 126 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 CRYBB3P26998 211 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 CLDN34H7C241 214 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 TCAPO15273 167 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 SLC25A39Q9BZJ4 359 aaPredicted RBP11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 AURKAIP1Q9NWT8 199 aaPredicted RBP11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 HNF1AP20823 631 aa11.38□□□□□ -0.59
SHCBP1-201ENST00000303383 RANP62826 216 aaKnown RBP11.38□□□□□ -0.59
SHCBP1-201ENST00000303383 OR5B12Q96R08 314 aa11.38□□□□□ -0.59
SHCBP1-201ENST00000303383 KMT2BQ9UMN6 2715 aaPredicted RBP11.38□□□□□ -0.59
SHCBP1-201ENST00000303383 MDFIC2A0A1B0GVS7 189 aa11.38□□□□□ -0.59
SHCBP1-201ENST00000303383 SMIM6P0DI80 62 aa11.38□□□□□ -0.59
SHCBP1-201ENST00000303383 YPEL3P61236 119 aaPredicted RBP11.38□□□□□ -0.59
SHCBP1-201ENST00000303383 VN1R17PQ8TDU5 208 aa11.38□□□□□ -0.59
SHCBP1-201ENST00000303383 H7BYZ3 331 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 NBEAP1P0C6P0 100 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 DEFB112Q30KQ8 113 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 NECAP1Q8NC96 275 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 CTDSP1Q9GZU7 261 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 GAR1Q9NY12 217 aaKnown RBP11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 FBN2P35556 2912 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 CCDC168Q8NDH2 2452 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 A6NDX4 124 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 HELTA6NFD8 242 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 FCGR2BP31994 310 aaPredicted RBP11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 GPR183P32249 361 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 PRSS57Q6UWY2 283 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 EEF1AKMT3Q96AZ1 226 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 PSMG3-AS1Q96PY0 264 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 TXN2Q99757 166 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 COLCA2A8K830 154 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 MBD6Q96DN6 1003 aa11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 ZNF48Q96MX3 618 aaPredicted RBP11.37□□□□□ -0.59
SHCBP1-201ENST00000303383 CXorf65A6NEN9 183 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 GGTLC3B5MD39 225 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 OR4F17Q8NGA8 305 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 HIST1H2BAQ96A08 127 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 RPH3ALQ9UNE2 315 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 BPIFA4PQ86YQ2 179 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 BCL6BQ8N143 479 aaPredicted RBP11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 ZNF491Q8N8L2 437 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 FXYD5Q96DB9 178 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 BIN3Q9NQY0 253 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 HELZ2Q9BYK8 2649 aaKnown RBP11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 PRRC2AP48634 2157 aaKnown RBP11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 IGHV3-35A0A0C4DH35 117 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 SLC25A5P05141 298 aaKnown RBP11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 S100A7P31151 101 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 GNG4P50150 75 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 ATP5G2Q06055 141 aa11.36□□□□□ -0.59
SHCBP1-201ENST00000303383 PGPEP1LA6NFU8 196 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 H3BTX0 84 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 TRGV3P03979 118 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 AMY1AP04745 511 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 SMAD7O15105 426 aaKnown RBP11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 CLEC3BP05452 202 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 CRYBA1P05813 215 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 CNN1P51911 297 aaKnown RBP11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 RAB4BP61018 213 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 ZNF343Q6P1L6 599 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 CLEC19AQ6UXS0 136 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 LINC01551Q86U37 167 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 C11orf52Q96A22 123 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 ANAPC16Q96DE5 110 aa11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 MRPL27Q9P0M9 148 aaKnown RBP11.35□□□□□ -0.59
SHCBP1-201ENST00000303383 PGPA6NDG6 321 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 HSBP1L1C9JCN9 74 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 ELOVL1Q9BW60 279 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 IGHV4-59P01825 116 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 RAB5AP20339 215 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 SHANK2-AS3Q9BTD1 123 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 TMEM242Q9NWH2 141 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 RNF24Q9Y225 148 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 AP4M1O00189 453 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 RPS10P46783 165 aaKnown RBP11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 TPPP2P59282 170 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 BLCAPP62952 87 aa11.34□□□□□ -0.59
SHCBP1-201ENST00000303383 BMPR1BO00238 502 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 CMTM2Q8TAZ6 248 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 ZNF502Q8TBZ5 544 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 RABAC1Q9UI14 185 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 SVEP1Q4LDE5 3571 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 IGHG2P01859 326 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 CTSGP08311 255 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 HIST1H1EP10412 219 aaKnown RBP11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 RAB5BP61020 215 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 UBE2G1P62253 170 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 OR5R1Q8NH85 324 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 NOL4LQ96MY1 436 aaPredicted RBP11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 CHRDL1Q9BU40 450 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 TRBV7-1A0A0A6YYK4 115 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 PF4V1P10720 104 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 GP9P14770 177 aa11.33□□□□□ -0.6
SHCBP1-201ENST00000303383 GALR1P47211 349 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms