RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 MBD3L2Q8NHZ7 208 aaPredicted RBP11.8□□□□□ -0.52
HIPK3-201ENST00000303296 ITGBL1O95965 494 aaPredicted RBP11.79□□□□□ -0.52
HIPK3-201ENST00000303296 SRP19P09132 144 aaKnown RBP11.79□□□□□ -0.52
HIPK3-201ENST00000303296 LILRA6Q6PI73 481 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 C1QTNF4Q9BXJ3 329 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 MLNRO43193 412 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 ITGB4P16144 1822 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 CTSBP07858 339 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 NGFRP08138 427 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 BMPERQ8N8U9 685 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 MBNL3Q9NUK0 354 aaKnown RBP11.79□□□□□ -0.52
HIPK3-201ENST00000303296 NEUROG3Q9Y4Z2 214 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 TMEM158Q8WZ71 300 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 CCL20P78556 96 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 C1orf53Q5VUE5 145 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 LYZL1Q6UWQ5 148 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 XCL2Q9UBD3 114 aa11.79□□□□□ -0.52
HIPK3-201ENST00000303296 IQCF6A8MYZ5 107 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 A0A0G2JK05 382 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 ATP6V0BQ99437 205 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 UPK2O00526 184 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 DDX60LQ5H9U9 1706 aaKnown RBP11.78□□□□□ -0.52
HIPK3-201ENST00000303296 IGLV1-36A0A0B4J1U3 117 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 ID3Q02535 119 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 TMEM170AQ8WVE7 144 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 H3BUX3 64 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 TGFBR3LH3BV60 316 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 NOVP48745 357 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 RPL18AQ02543 176 aaKnown RBP11.78□□□□□ -0.52
HIPK3-201ENST00000303296 MPV17L2Q567V2 206 aa11.78□□□□□ -0.52
HIPK3-201ENST00000303296 TRBV5-5A0A0J9YX44 114 aa11.77□□□□□ -0.52
HIPK3-201ENST00000303296 DKK1O94907 266 aa11.77□□□□□ -0.52
HIPK3-201ENST00000303296 PSG7Q13046 419 aa11.77□□□□□ -0.52
HIPK3-201ENST00000303296 PILRAQ9UKJ1 303 aa11.77□□□□□ -0.52
HIPK3-201ENST00000303296 PRSS29PA6NIE9 313 aa11.77□□□□□ -0.52
HIPK3-201ENST00000303296 C4orf48Q5BLP8 95 aa11.77□□□□□ -0.52
HIPK3-201ENST00000303296 RBM38Q9H0Z9 239 aaKnown RBP11.77□□□□□ -0.52
HIPK3-201ENST00000303296 MRPS18AQ9NVS2 196 aaKnown RBP11.77□□□□□ -0.53
HIPK3-201ENST00000303296 RNF114Q9Y508 228 aa11.77□□□□□ -0.53
HIPK3-201ENST00000303296 IGKV1OR2-108A0A075B7D4 117 aa11.77□□□□□ -0.53
HIPK3-201ENST00000303296 IGHV3-38A0A0C4DH36 116 aa11.77□□□□□ -0.53
HIPK3-201ENST00000303296 PRSS23O95084 383 aa11.77□□□□□ -0.53
HIPK3-201ENST00000303296 KIR3DS1Q14943 382 aa11.77□□□□□ -0.53
HIPK3-201ENST00000303296 ZNF831Q5JPB2 1677 aa11.77□□□□□ -0.53
HIPK3-201ENST00000303296 PSPNO60542 156 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 TRBV25-1A0A075B6N4 114 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 KLF17Q5JT82 389 aaPredicted RBP11.76□□□□□ -0.53
HIPK3-201ENST00000303296 MAPK1IP1LQ8NDC0 245 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 PKDREJQ9NTG1 2253 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 IGKV2D-24A0A075B6R9 120 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 COX5BP10606 129 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 GNB1LQ9BYB4 327 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 SH2D1AO60880 128 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 KDM3BQ7LBC6 1761 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 J3QW42 95 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 TIAF1O95411 115 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 IGKV1-5P01602 117 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 RIPPLY2Q5TAB7 128 aa11.76□□□□□ -0.53
HIPK3-201ENST00000303296 TRAV9-1A0A075B6T8 112 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 IGF2BP2-AS1Q96M15 143 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 ANGP03950 147 aaKnown RBP11.75□□□□□ -0.53
HIPK3-201ENST00000303296 CRYGCP07315 174 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 A0A0G2JMM0 328 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 A0A1W2PPB8 328 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 KIR3DP1A8MWS1 328 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 EFNB3Q15768 340 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 RNF166Q96A37 237 aaPredicted RBP11.75□□□□□ -0.53
HIPK3-201ENST00000303296 GAGE12BA1L429 117 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 GAGE7O76087 117 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 GAGE12FP0CL80 117 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 GAGE12GP0CL81 117 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 GAGE12IP0CL82 117 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 ZNF138P52744 262 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 SYNJ2BPP57105 145 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 ZNF124Q15973 351 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 MORN2Q502X0 79 aa11.75□□□□□ -0.53
HIPK3-201ENST00000303296 NRAPQ86VF7 1730 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 DEFB131AP59861 70 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 TEX38Q6PEX7 206 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 ATRXP46100 2492 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 VWC2Q2TAL6 325 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 LCN12Q6JVE5 192 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 SPATA25Q9BR10 227 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 PPP1R3EQ9H7J1 279 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 C9orf106Q8NAJ2 232 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 LY6G5BQ8NDX9 201 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 SAP25Q8TEE9 199 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 ERVH48-1M5A8F1 160 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 AZU1P20160 251 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 IRF3Q14653 427 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 NHLRC3Q5JS37 347 aa11.74□□□□□ -0.53
HIPK3-201ENST00000303296 TSKUQ8WUA8 353 aa11.73□□□□□ -0.53
HIPK3-201ENST00000303296 WFDC6Q9BQY6 131 aa11.73□□□□□ -0.53
HIPK3-201ENST00000303296 ATAD5Q96QE3 1844 aa11.73□□□□□ -0.53
HIPK3-201ENST00000303296 PAX9P55771 341 aa11.73□□□□□ -0.53
HIPK3-201ENST00000303296 ZNF525Q8N782 197 aa11.73□□□□□ -0.53
HIPK3-201ENST00000303296 LIME1Q9H400 295 aa11.73□□□□□ -0.53
HIPK3-201ENST00000303296 E9PQ18 207 aa11.73□□□□□ -0.53
HIPK3-201ENST00000303296 SMPXQ9UHP9 88 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms