RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 MRPS12O15235 138 aaKnown RBP8.18□□□□□ -1.1
CLCC1-201ENST00000302500 TSC22D2O75157 780 aa8.18□□□□□ -1.1
CLCC1-201ENST00000302500 RAB11AP62491 216 aa8.18□□□□□ -1.1
CLCC1-201ENST00000302500 PAFAH1B2P68402 229 aa8.18□□□□□ -1.1
CLCC1-201ENST00000302500 IAH1Q2TAA2 248 aaPredicted RBP8.18□□□□□ -1.1
CLCC1-201ENST00000302500 C4orf46Q504U0 113 aa8.18□□□□□ -1.1
CLCC1-201ENST00000302500 SPANXN5Q5MJ07 72 aa8.18□□□□□ -1.1
CLCC1-201ENST00000302500 C1orf194Q5T5A4 169 aa8.18□□□□□ -1.1
CLCC1-201ENST00000302500 GDF5OSQ5U4N7 250 aa8.18□□□□□ -1.1
CLCC1-201ENST00000302500 STXBP6Q8NFX7 210 aa8.18□□□□□ -1.1
CLCC1-201ENST00000302500 GATAD1Q8WUU5 269 aa8.18□□□□□ -1.1
CLCC1-201ENST00000302500 C11orf68Q9H3H3 251 aaKnown RBP8.18□□□□□ -1.1
CLCC1-201ENST00000302500 PGPEP1Q9NXJ5 209 aa8.18□□□□□ -1.1
CLCC1-201ENST00000302500 STRAPQ9Y3F4 350 aaKnown RBP8.18□□□□□ -1.1
CLCC1-201ENST00000302500 X6R8D5 127 aa8.18□□□□□ -1.1
CLCC1-201ENST00000302500 BIRC6Q9NR09 4857 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 KNCNA6PVL3 124 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 SSSCA1O60232 199 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 SCGB2A1O75556 95 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 IL5P05113 134 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 INPP1P49441 399 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 DEFB1P60022 68 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 DLK1P80370 383 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 PATE2Q6UY27 113 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 S100ZQ8WXG8 99 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 CLUHP3Q96NS8 147 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 RAB40CQ96S21 281 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 PSENENQ9NZ42 101 aa8.17□□□□□ -1.1
CLCC1-201ENST00000302500 TRAV8-2A0A0B4J237 113 aa8.16□□□□□ -1.1
CLCC1-201ENST00000302500 SNRPGP15A8MWD9 76 aa8.16□□□□□ -1.1
CLCC1-201ENST00000302500 H3BMM0 161 aa8.16□□□□□ -1.1
CLCC1-201ENST00000302500 H3BRN7 92 aa8.16□□□□□ -1.1
CLCC1-201ENST00000302500 DNASE2O00115 360 aaPredicted RBP8.16□□□□□ -1.1
CLCC1-201ENST00000302500 H2AFB2P0C5Z0 115 aa8.16□□□□□ -1.1
CLCC1-201ENST00000302500 METTL15P1P0C7V9 234 aa8.16□□□□□ -1.1
CLCC1-201ENST00000302500 AP2S1P53680 142 aaPredicted RBP8.16□□□□□ -1.1
CLCC1-201ENST00000302500 OR2F1Q13607 317 aa8.16□□□□□ -1.1
CLCC1-201ENST00000302500 VWC2Q2TAL6 325 aa8.16□□□□□ -1.1
CLCC1-201ENST00000302500 ZNF709Q8N972 641 aa8.16□□□□□ -1.1
CLCC1-201ENST00000302500 C20orf173Q96LM9 149 aa8.16□□□□□ -1.1
CLCC1-201ENST00000302500 SLC25A32Q9H2D1 315 aa8.16□□□□□ -1.1
CLCC1-201ENST00000302500 ZNF98A6NK75 572 aa8.15□□□□□ -1.1
CLCC1-201ENST00000302500 CFDP00746 253 aaPredicted RBP8.15□□□□□ -1.1
CLCC1-201ENST00000302500 CA1P00915 261 aaPredicted RBP8.15□□□□□ -1.1
CLCC1-201ENST00000302500 IFNA21P01568 189 aa8.15□□□□□ -1.1
CLCC1-201ENST00000302500 RBMY1A1P0DJD3 496 aaKnown RBP8.15□□□□□ -1.1
CLCC1-201ENST00000302500 RBMY1CP0DJD4 496 aa8.15□□□□□ -1.1
CLCC1-201ENST00000302500 HLA-DRB4P13762 266 aa8.15□□□□□ -1.1
CLCC1-201ENST00000302500 LYZP61626 148 aa8.15□□□□□ -1.1
CLCC1-201ENST00000302500 RBMY1FQ15415 496 aaKnown RBP8.15□□□□□ -1.1
CLCC1-201ENST00000302500 PSMG4Q5JS54 123 aa8.15□□□□□ -1.1
CLCC1-201ENST00000302500 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.15□□□□□ -1.1
CLCC1-201ENST00000302500 CYP2G1PQ6ZSU1 146 aa8.15□□□□□ -1.1
CLCC1-201ENST00000302500 HLA-DRB4X5D2U9 266 aa8.15□□□□□ -1.1
CLCC1-201ENST00000302500 HECTD4Q9Y4D8 3996 aa8.15□□□□□ -1.11
CLCC1-201ENST00000302500 DEDDO75618 318 aa8.14□□□□□ -1.11
CLCC1-201ENST00000302500 LINC00869P0C866 280 aa8.14□□□□□ -1.11
CLCC1-201ENST00000302500 SPP1P10451 314 aa8.14□□□□□ -1.11
CLCC1-201ENST00000302500 NUP62P37198 522 aaPredicted RBP8.14□□□□□ -1.11
CLCC1-201ENST00000302500 RPL11P62913 178 aaKnown RBP8.14□□□□□ -1.11
CLCC1-201ENST00000302500 RPP30P78346 268 aaKnown RBP8.14□□□□□ -1.11
CLCC1-201ENST00000302500 AMTNQ6UX39 209 aa8.14□□□□□ -1.11
CLCC1-201ENST00000302500 ZNF705AQ6ZN79 300 aaPredicted RBP8.14□□□□□ -1.11
CLCC1-201ENST00000302500 NRARPQ7Z6K4 114 aa8.14□□□□□ -1.11
CLCC1-201ENST00000302500 C12orf45Q8N5I9 185 aaPredicted RBP8.14□□□□□ -1.11
CLCC1-201ENST00000302500 MGST2Q99735 147 aa8.14□□□□□ -1.11
CLCC1-201ENST00000302500 MARVELD1Q9BSK0 173 aa8.14□□□□□ -1.11
CLCC1-201ENST00000302500 SHANK2-AS3Q9BTD1 123 aa8.14□□□□□ -1.11
CLCC1-201ENST00000302500 PBDC1Q9BVG4 233 aa8.14□□□□□ -1.11
CLCC1-201ENST00000302500 GGACTQ9BVM4 153 aa8.14□□□□□ -1.11
CLCC1-201ENST00000302500 SCRT1Q9BWW7 348 aa8.14□□□□□ -1.11
CLCC1-201ENST00000302500 SAV1Q9H4B6 383 aaPredicted RBP8.14□□□□□ -1.11
CLCC1-201ENST00000302500 H0YIZ8 118 aa8.13□□□□□ -1.11
CLCC1-201ENST00000302500 J3QL48 77 aa8.13□□□□□ -1.11
CLCC1-201ENST00000302500 PSMB3P49720 205 aa8.13□□□□□ -1.11
CLCC1-201ENST00000302500 ZNF846Q147U1 533 aa8.13□□□□□ -1.11
CLCC1-201ENST00000302500 ACTL10Q5JWF8 245 aa8.13□□□□□ -1.11
CLCC1-201ENST00000302500 MORN5Q5VZ52 161 aa8.13□□□□□ -1.11
CLCC1-201ENST00000302500 MORN3Q6PF18 240 aaPredicted RBP8.13□□□□□ -1.11
CLCC1-201ENST00000302500 OR11H2Q8NH07 326 aa8.13□□□□□ -1.11
CLCC1-201ENST00000302500 NARS2Q96I59 477 aaKnown RBP8.13□□□□□ -1.11
CLCC1-201ENST00000302500 C2orf50Q96LR7 162 aa8.13□□□□□ -1.11
CLCC1-201ENST00000302500 RARRES2Q99969 163 aa8.13□□□□□ -1.11
CLCC1-201ENST00000302500 SLC25A39Q9BZJ4 359 aaPredicted RBP8.13□□□□□ -1.11
CLCC1-201ENST00000302500 NPVFQ9HCQ7 196 aa8.13□□□□□ -1.11
CLCC1-201ENST00000302500 LYRM2Q9NU23 88 aaPredicted RBP8.13□□□□□ -1.11
CLCC1-201ENST00000302500 ELOA3CA0A087WX78 387 aaPredicted RBP8.12□□□□□ -1.11
CLCC1-201ENST00000302500 A0A087X0K7 114 aa8.12□□□□□ -1.11
CLCC1-201ENST00000302500 FAM240BA0A1B0GVZ2 78 aa8.12□□□□□ -1.11
CLCC1-201ENST00000302500 IGSF23A1L1A6 192 aa8.12□□□□□ -1.11
CLCC1-201ENST00000302500 ZNF705FA8MVS1 300 aaPredicted RBP8.12□□□□□ -1.11
CLCC1-201ENST00000302500 ISLRO14498 428 aa8.12□□□□□ -1.11
CLCC1-201ENST00000302500 ZNF705DP0CH99 300 aaPredicted RBP8.12□□□□□ -1.11
CLCC1-201ENST00000302500 ZNF705BP0CI00 300 aaPredicted RBP8.12□□□□□ -1.11
CLCC1-201ENST00000302500 SLC38A11Q08AI6 406 aa8.12□□□□□ -1.11
CLCC1-201ENST00000302500 RAB32Q13637 225 aa8.12□□□□□ -1.11
CLCC1-201ENST00000302500 TMEM41BQ5BJD5 291 aa8.12□□□□□ -1.11
CLCC1-201ENST00000302500 STHQ8IWL8 128 aa8.12□□□□□ -1.11
CLCC1-201ENST00000302500 CHAC2Q8WUX2 184 aa8.12□□□□□ -1.11
CLCC1-201ENST00000302500 TMEM37Q8WXS4 190 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms