RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 NBEAP1P0C6P0 100 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 ADMP35318 185 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 BLCAPP62952 87 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 ZNF329Q86UD4 541 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 CLDN34H7C241 214 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 IGHG2P01859 326 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 IGF1P05019 195 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 MYCNOSP40205 109 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 RPL35P42766 123 aaKnown RBP17.37■□□□□ 0.37
SMAD1-201ENST00000302085 ELOBQ15370 118 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 USF2Q15853 346 aaPredicted RBP17.37■□□□□ 0.37
SMAD1-201ENST00000302085 OCC1Q8TAD7 63 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 C2CD4CQ8TF44 421 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 BLNKQ8WV28 456 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 TMEM14CQ9P0S9 112 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 CELSR1Q9NYQ6 3014 aa17.37■□□□□ 0.37
SMAD1-201ENST00000302085 LOC105371267A0A1B0GV96 52 aa17.36■□□□□ 0.37
SMAD1-201ENST00000302085 H3BRN7 92 aa17.36■□□□□ 0.37
SMAD1-201ENST00000302085 Q6ZS46 218 aa17.36■□□□□ 0.37
SMAD1-201ENST00000302085 PRELID1Q9Y255 219 aa17.36■□□□□ 0.37
SMAD1-201ENST00000302085 URGCP-MRPS24S4R325 110 aa17.36■□□□□ 0.37
SMAD1-201ENST00000302085 HELTA6NFD8 242 aa17.35■□□□□ 0.37
SMAD1-201ENST00000302085 IGHV4-59P01825 116 aa17.35■□□□□ 0.37
SMAD1-201ENST00000302085 RAB5AP20339 215 aa17.35■□□□□ 0.37
SMAD1-201ENST00000302085 RANP62826 216 aaKnown RBP17.35■□□□□ 0.37
SMAD1-201ENST00000302085 CYB5R2Q6BCY4 276 aa17.35■□□□□ 0.37
SMAD1-201ENST00000302085 ZNF600Q6ZNG1 722 aa17.35■□□□□ 0.37
SMAD1-201ENST00000302085 ZNF414Q96IQ9 312 aa17.35■□□□□ 0.37
SMAD1-201ENST00000302085 CLEC3BP05452 202 aa17.35■□□□□ 0.37
SMAD1-201ENST00000302085 FOLR2P14207 255 aa17.35■□□□□ 0.37
SMAD1-201ENST00000302085 IER3P46695 156 aa17.34■□□□□ 0.37
SMAD1-201ENST00000302085 CCDC140Q96MF4 163 aa17.34■□□□□ 0.37
SMAD1-201ENST00000302085 PRRC2AP48634 2157 aaKnown RBP17.34■□□□□ 0.37
SMAD1-201ENST00000302085 C9JCJ5 164 aa17.33■□□□□ 0.37
SMAD1-201ENST00000302085 H3BTX0 84 aa17.33■□□□□ 0.37
SMAD1-201ENST00000302085 CXCL1P09341 107 aa17.33■□□□□ 0.37
SMAD1-201ENST00000302085 GPR183P32249 361 aa17.33■□□□□ 0.37
SMAD1-201ENST00000302085 WFDC11Q8NEX6 87 aa17.33■□□□□ 0.37
SMAD1-201ENST00000302085 NOL4LQ96MY1 436 aaPredicted RBP17.33■□□□□ 0.37
SMAD1-201ENST00000302085 ZNF586Q9NXT0 402 aa17.33■□□□□ 0.37
SMAD1-201ENST00000302085 SCGB2A1O75556 95 aa17.33■□□□□ 0.36
SMAD1-201ENST00000302085 HELZ2Q9BYK8 2649 aaKnown RBP17.32■□□□□ 0.36
SMAD1-201ENST00000302085 TGIF2-C20orf24A0A0A6YYL0 155 aa17.32■□□□□ 0.36
SMAD1-201ENST00000302085 HIST1H1EP10412 219 aaKnown RBP17.32■□□□□ 0.36
SMAD1-201ENST00000302085 HNF1AP20823 631 aa17.32■□□□□ 0.36
SMAD1-201ENST00000302085 ATP5G2Q06055 141 aa17.32■□□□□ 0.36
SMAD1-201ENST00000302085 C9orf139Q6ZV77 190 aa17.32■□□□□ 0.36
SMAD1-201ENST00000302085 EEF1AKMT3Q96AZ1 226 aa17.32■□□□□ 0.36
SMAD1-201ENST00000302085 ANAPC16Q96DE5 110 aa17.32■□□□□ 0.36
SMAD1-201ENST00000302085 PGPA6NDG6 321 aa17.31■□□□□ 0.36
SMAD1-201ENST00000302085 ZNF98A6NK75 572 aa17.31■□□□□ 0.36
SMAD1-201ENST00000302085 H7BYZ3 331 aa17.31■□□□□ 0.36
SMAD1-201ENST00000302085 PPIFP30405 207 aaKnown RBP17.31■□□□□ 0.36
SMAD1-201ENST00000302085 CLEC19AQ6UXS0 136 aa17.31■□□□□ 0.36
SMAD1-201ENST00000302085 CIARTQ8N365 385 aaPredicted RBP17.31■□□□□ 0.36
SMAD1-201ENST00000302085 LY96Q9Y6Y9 160 aa17.31■□□□□ 0.36
SMAD1-201ENST00000302085 TRBV7-1A0A0A6YYK4 115 aa17.31■□□□□ 0.36
SMAD1-201ENST00000302085 K7EN84 100 aa17.31■□□□□ 0.36
SMAD1-201ENST00000302085 CENPWQ5EE01 88 aa17.31■□□□□ 0.36
SMAD1-201ENST00000302085 LINC00479Q96M42 142 aa17.31■□□□□ 0.36
SMAD1-201ENST00000302085 IGHV3-35A0A0C4DH35 117 aa17.3■□□□□ 0.36
SMAD1-201ENST00000302085 MRPS12O15235 138 aaKnown RBP17.3■□□□□ 0.36
SMAD1-201ENST00000302085 BPIFA4PQ86YQ2 179 aa17.3■□□□□ 0.36
SMAD1-201ENST00000302085 MLXQ9UH92 298 aa17.3■□□□□ 0.36
SMAD1-201ENST00000302085 ZANQ9Y493 2812 aa17.3■□□□□ 0.36
SMAD1-201ENST00000302085 PEX7O00628 323 aa17.29■□□□□ 0.36
SMAD1-201ENST00000302085 TRGV3P03979 118 aa17.29■□□□□ 0.36
SMAD1-201ENST00000302085 PFN1P07737 140 aaKnown RBP17.29■□□□□ 0.36
SMAD1-201ENST00000302085 CD99P14209 185 aa17.29■□□□□ 0.36
SMAD1-201ENST00000302085 GNG5P63218 68 aa17.29■□□□□ 0.36
SMAD1-201ENST00000302085 GAR1Q9NY12 217 aaKnown RBP17.29■□□□□ 0.36
SMAD1-201ENST00000302085 EPDR1Q9UM22 224 aa17.29■□□□□ 0.36
SMAD1-201ENST00000302085 FAM223BA6NKX1 122 aa17.29■□□□□ 0.36
SMAD1-201ENST00000302085 GNG4P50150 75 aa17.29■□□□□ 0.36
SMAD1-201ENST00000302085 FAM223AQ8IWN6 122 aa17.29■□□□□ 0.36
SMAD1-201ENST00000302085 Q9H3A6 140 aa17.29■□□□□ 0.36
SMAD1-201ENST00000302085 BRI3O95415 125 aa17.28■□□□□ 0.36
SMAD1-201ENST00000302085 SLC25A5P05141 298 aaKnown RBP17.28■□□□□ 0.36
SMAD1-201ENST00000302085 IGLC2P0DOY2 106 aa17.28■□□□□ 0.36
SMAD1-201ENST00000302085 TOMM20LQ6UXN7 152 aa17.28■□□□□ 0.36
SMAD1-201ENST00000302085 Q6YL49 198 aa17.28■□□□□ 0.36
SMAD1-201ENST00000302085 S100A7AQ86SG5 101 aa17.28■□□□□ 0.36
SMAD1-201ENST00000302085 SFRP2Q96HF1 295 aa17.28■□□□□ 0.36
SMAD1-201ENST00000302085 IGF2BP2-AS1Q96M15 143 aa17.28■□□□□ 0.36
SMAD1-201ENST00000302085 C17orf77Q96MU5 243 aa17.28■□□□□ 0.36
SMAD1-201ENST00000302085 TCEAL7Q9BRU2 100 aa17.28■□□□□ 0.36
SMAD1-201ENST00000302085 AP4M1O00189 453 aa17.28■□□□□ 0.36
SMAD1-201ENST00000302085 IGHV3OR16-8A0A075B7F1 116 aa17.27■□□□□ 0.36
SMAD1-201ENST00000302085 TGOLN2O43493 480 aa17.27■□□□□ 0.36
SMAD1-201ENST00000302085 GALR1P47211 349 aa17.27■□□□□ 0.36
SMAD1-201ENST00000302085 TAS2R60P59551 318 aa17.27■□□□□ 0.36
SMAD1-201ENST00000302085 OR5R1Q8NH85 324 aa17.27■□□□□ 0.36
SMAD1-201ENST00000302085 GNB4Q9HAV0 340 aa17.27■□□□□ 0.36
SMAD1-201ENST00000302085 TRBV19A0A075B6N1 114 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 TRAV34A0A0B4J273 112 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 IGLV2-8P01709 118 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 CNN1P51911 297 aaKnown RBP17.26■□□□□ 0.35
SMAD1-201ENST00000302085 TEX38Q6PEX7 206 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 ZFP82Q8N141 532 aa17.26■□□□□ 0.35
SMAD1-201ENST00000302085 OR4F17Q8NGA8 305 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms