RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 S100A7P31151 101 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 TPPP2P59282 170 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 ZNF674Q2M3X9 581 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 Q6ZS46 218 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 USMG5Q96IX5 58 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 C20orf24Q9BUV8 137 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 PARLQ9H300 379 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 RPS10P5Q9NQ39 176 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 ITPR2Q14571 2701 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 ZNF600Q6ZNG1 722 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 CBLN2Q8IUK8 224 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 FXYD5Q96DB9 178 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 CCDC140Q96MF4 163 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 SHANK2-AS3Q9BTD1 123 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 CHRDL1Q9BU40 450 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 PRSS22Q9GZN4 317 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 NPFFR1Q9GZQ6 430 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 NAT8Q9UHE5 227 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 RNF24Q9Y225 148 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 TEX15Q9BXT5 2789 aa12.23□□□□□ -0.45
HERPUD1-201ENST00000300302 C7orf77A4D0Y5 90 aa12.22□□□□□ -0.45
HERPUD1-201ENST00000300302 ADMP35318 185 aa12.22□□□□□ -0.45
HERPUD1-201ENST00000300302 TMEM88Q6PEY1 159 aa12.22□□□□□ -0.45
HERPUD1-201ENST00000300302 CLEC19AQ6UXS0 136 aa12.22□□□□□ -0.45
HERPUD1-201ENST00000300302 IL17RELQ6ZVW7 336 aa12.22□□□□□ -0.45
HERPUD1-201ENST00000300302 SIGLECL1Q8N7X8 197 aa12.22□□□□□ -0.45
HERPUD1-201ENST00000300302 YAE1D1Q9NRH1 226 aa12.22□□□□□ -0.45
HERPUD1-201ENST00000300302 TMEM14CQ9P0S9 112 aa12.22□□□□□ -0.45
HERPUD1-201ENST00000300302 H3BRN7 92 aa12.21□□□□□ -0.45
HERPUD1-201ENST00000300302 TGOLN2O43493 480 aa12.21□□□□□ -0.45
HERPUD1-201ENST00000300302 PF4V1P10720 104 aa12.21□□□□□ -0.45
HERPUD1-201ENST00000300302 GP9P14770 177 aa12.21□□□□□ -0.45
HERPUD1-201ENST00000300302 HNF1AP20823 631 aa12.21□□□□□ -0.45
HERPUD1-201ENST00000300302 KRTAP1-1Q07627 177 aa12.21□□□□□ -0.45
HERPUD1-201ENST00000300302 TMEM241Q24JQ0 296 aa12.21□□□□□ -0.45
HERPUD1-201ENST00000300302 GNB4Q9HAV0 340 aa12.21□□□□□ -0.45
HERPUD1-201ENST00000300302 ZFHX3Q15911 3703 aa12.21□□□□□ -0.45
HERPUD1-201ENST00000300302 CCDC168Q8NDH2 2452 aa12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 A0A0G2JLM5 398 aa12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 B4DEV8 164 aa12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 BMPR1BO00238 502 aa12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 TSPAN4O14817 238 aa12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 NDUFB4O95168 129 aa12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 IGLV1-40P01703 118 aa12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 CFHR3Q02985 330 aa12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 RELQ04864 619 aaPredicted RBP12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 USF2Q15853 346 aaPredicted RBP12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 LEMD1Q68G75 181 aa12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 TMEM86BQ8N661 226 aa12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 SDF2L1Q9HCN8 221 aa12.21□□□□□ -0.46
HERPUD1-201ENST00000300302 SCO2A0A1W2PP80 73 aa12.2□□□□□ -0.46
HERPUD1-201ENST00000300302 NBEAP1P0C6P0 100 aa12.2□□□□□ -0.46
HERPUD1-201ENST00000300302 NPPCP23582 126 aa12.2□□□□□ -0.46
HERPUD1-201ENST00000300302 BPIFA4PQ86YQ2 179 aa12.2□□□□□ -0.46
HERPUD1-201ENST00000300302 C11orf52Q96A22 123 aa12.2□□□□□ -0.46
HERPUD1-201ENST00000300302 RABAC1Q9UI14 185 aa12.2□□□□□ -0.46
HERPUD1-201ENST00000300302 GGTLC3B5MD39 225 aa12.19□□□□□ -0.46
HERPUD1-201ENST00000300302 SUMO1P63165 101 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-201ENST00000300302 SMCO4Q9NRQ5 59 aa12.19□□□□□ -0.46
HERPUD1-201ENST00000300302 ZNF98A6NK75 572 aa12.19□□□□□ -0.46
HERPUD1-201ENST00000300302 SCGB2A2Q13296 93 aa12.19□□□□□ -0.46
HERPUD1-201ENST00000300302 BLNKQ8WV28 456 aa12.19□□□□□ -0.46
HERPUD1-201ENST00000300302 TCEAL7Q9BRU2 100 aa12.19□□□□□ -0.46
HERPUD1-201ENST00000300302 TMEM89A2RUT3 159 aa12.18□□□□□ -0.46
HERPUD1-201ENST00000300302 IGHG4P01861 327 aa12.18□□□□□ -0.46
HERPUD1-201ENST00000300302 HIST1H1EP10412 219 aaKnown RBP12.18□□□□□ -0.46
HERPUD1-201ENST00000300302 AKR1C3P42330 323 aa12.18□□□□□ -0.46
HERPUD1-201ENST00000300302 RAB9AP51151 201 aa12.18□□□□□ -0.46
HERPUD1-201ENST00000300302 TMEM95Q3KNT9 176 aa12.18□□□□□ -0.46
HERPUD1-201ENST00000300302 ZNF343Q6P1L6 599 aa12.18□□□□□ -0.46
HERPUD1-201ENST00000300302 TOMM20LQ6UXN7 152 aa12.18□□□□□ -0.46
HERPUD1-201ENST00000300302 OR4F17Q8NGA8 305 aa12.18□□□□□ -0.46
HERPUD1-201ENST00000300302 FLNAP21333 2647 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 A0A087WWC5 75 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 RANP62826 216 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 SLC35B1P78383 322 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 SMR3AQ99954 134 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 DERL1Q9BUN8 251 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 KLK15Q9H2R5 256 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 ZNF702PQ9H963 129 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 IGHV3-35A0A0C4DH35 117 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 CRYBB3P26998 211 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 ARL3P36405 182 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 ADIRFQ15847 76 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 ZFAND3Q9H8U3 227 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 PRELID1Q9Y255 219 aa12.17□□□□□ -0.46
HERPUD1-201ENST00000300302 PPP5D1E7EU14 171 aa12.16□□□□□ -0.46
HERPUD1-201ENST00000300302 RPL23P62829 140 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-201ENST00000300302 FAM209BQ5JX69 171 aa12.16□□□□□ -0.46
HERPUD1-201ENST00000300302 ZNF329Q86UD4 541 aa12.16□□□□□ -0.46
HERPUD1-201ENST00000300302 TMEM190Q8WZ59 177 aa12.16□□□□□ -0.46
HERPUD1-201ENST00000300302 ELOVL1Q9BW60 279 aa12.16□□□□□ -0.46
HERPUD1-201ENST00000300302 HELTA6NFD8 242 aa12.15□□□□□ -0.46
HERPUD1-201ENST00000300302 SNRPCP09234 159 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-201ENST00000300302 RPL7P18124 248 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-201ENST00000300302 PSMB8P28062 276 aa12.15□□□□□ -0.46
HERPUD1-201ENST00000300302 TEX38Q6PEX7 206 aa12.15□□□□□ -0.46
HERPUD1-201ENST00000300302 DUX5Q96PT3 197 aa12.15□□□□□ -0.46
HERPUD1-201ENST00000300302 TUBA4BQ9H853 241 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms